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FASTA Sequence PDB Format mmCIF Format
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9VH5

Cryo em structure of hemagglutinin from puerto rico/8/1934-new york/55/2004 (h3n2) in complex with a single domain antibody

PDB DOI: 10.2210/pdb9vh5/pdb

Classification: VIRAL PROTEIN
Organism(s): Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos

Deposited: 2025-06-16
Deposition Author(s): Huang, K.K. , Wu, Y.L. , Yang, Z.L. , Ying, T.L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

Literature

Cryo em structure of hemagglutinin from puerto rico/8/1934-new york/55/2004 (h3n2) in complex with a single domain antibody

Huang, K.K. , Wu, Y.L. , Yang, Z.L. , Ying, T.L.

Primary Citation of Related Structures: 9VH5


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin A 321 Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos NSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILDGENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEFNNESFNWTGVTQNGTSSSCKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIWGVHHPVTDNDQIRLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPGDILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRITYGACPRYVKQNTLKLATGMRNVPEKQT
Hemagglutinin D 321 Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos NSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILDGENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEFNNESFNWTGVTQNGTSSSCKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIWGVHHPVTDNDQIRLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPGDILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRITYGACPRYVKQNTLKLATGMRNVPEKQT
Hemagglutinin G 321 Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos NSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILDGENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEFNNESFNWTGVTQNGTSSSCKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIWGVHHPVTDNDQIRLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPGDILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRITYGACPRYVKQNTLKLATGMRNVPEKQT
Hemagglutinin B 172 Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos RGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGIGQAADLKSTQAAINQINGKLNRLIGKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFERTKKQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDVYRDEALNNRF
Hemagglutinin E 172 Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos RGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGIGQAADLKSTQAAINQINGKLNRLIGKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFERTKKQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDVYRDEALNNRF
Hemagglutinin H 172 Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos RGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGIGQAADLKSTQAAINQINGKLNRLIGKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFERTKKQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDVYRDEALNNRF
nanobody C 116 Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos EVQLVESGGDSVQPGGSLRLSCAASGSIFHINGMGWYRQAPGRQRELVAAIFSGGSTNYADSVKGRFTISGDNAKNTAYLQMNSLKPEDTAVYYCAARKWTGNVWAFWGQGTQVTV
nanobody F 116 Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos EVQLVESGGDSVQPGGSLRLSCAASGSIFHINGMGWYRQAPGRQRELVAAIFSGGSTNYADSVKGRFTISGDNAKNTAYLQMNSLKPEDTAVYYCAARKWTGNVWAFWGQGTQVTV
nanobody I 116 Influenza A Virus (A/New York/55/2004(H3N2)) , Vicugna Pacos EVQLVESGGDSVQPGGSLRLSCAASGSIFHINGMGWYRQAPGRQRELVAAIFSGGSTNYADSVKGRFTISGDNAKNTAYLQMNSLKPEDTAVYYCAARKWTGNVWAFWGQGTQVTV
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-06-16
Deposition Author(s): Huang, K.K. , Wu, Y.L. , Yang, Z.L. , Ying, T.L.