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FASTA Sequence PDB Format mmCIF Format
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9VDO

Cryo-em structure of the substrate bound drt4

PDB DOI: 10.2210/pdb9vdo/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Escherichia Coli

Deposited: 2025-06-09
Deposition Author(s): Deng, Z. , Wang, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.93 Å

Literature

Cryo-em structure of the substrate bound drt4

Deng, Z. , Wang, Y.

Primary Citation of Related Structures: 9VDO


Proteins
Molecule Chains Sequence Length Organism Sequence
Reverse transcriptase domain-containing protein A 549 Escherichia Coli HHHHHHSSGMVIFDEKRHLYEALLRHNYFPNQKGSISEIPPCFSSRTFTPEIAELISSDTSGRRSLQGYDCVEYYATRYNNFPRTLSIIHPKAYSKLAKHIHDNWEEIRFIKENENSMIKPDMHADGRIIIMNYEDAETKTIRELNDGFGRRFKVNADISGCFTNIYSHSIPWAVIGVNNAKIALNTKVKNQDKHWSDKLDYFQRQAKRNETHGVPIGPATSSIVCEIILSAVDKRLRDDGFLFRRYIDDYTCYCKTHDDAKEFLHLLGMELSKYKLSLNLHKTKITNLPGTLNDNWVSLLNVNSPTKKRFTDQDLNKLSSSEVINFLDYAVQLNTQVGGGSILKYAISLVINNLDEYTITQVYDYLLNLSWHYPMLIPYLGVLIEHVYLDDGDEYKNKFNEILSMCAENKCSDGMAWTLYFCIKNNIDIDDDVIEKIICFGDCLSLCLLDSSDIYEEKINNFVSDIIKLDYEYDIDRYWLLFYQRFFKDKAPSPYNDKCFDIMKGYGVDFMPDENYKTKAESYCHVVNNPFLEDGDEIVSFNDYMAIA
Reverse transcriptase domain-containing protein B 549 Escherichia Coli HHHHHHSSGMVIFDEKRHLYEALLRHNYFPNQKGSISEIPPCFSSRTFTPEIAELISSDTSGRRSLQGYDCVEYYATRYNNFPRTLSIIHPKAYSKLAKHIHDNWEEIRFIKENENSMIKPDMHADGRIIIMNYEDAETKTIRELNDGFGRRFKVNADISGCFTNIYSHSIPWAVIGVNNAKIALNTKVKNQDKHWSDKLDYFQRQAKRNETHGVPIGPATSSIVCEIILSAVDKRLRDDGFLFRRYIDDYTCYCKTHDDAKEFLHLLGMELSKYKLSLNLHKTKITNLPGTLNDNWVSLLNVNSPTKKRFTDQDLNKLSSSEVINFLDYAVQLNTQVGGGSILKYAISLVINNLDEYTITQVYDYLLNLSWHYPMLIPYLGVLIEHVYLDDGDEYKNKFNEILSMCAENKCSDGMAWTLYFCIKNNIDIDDDVIEKIICFGDCLSLCLLDSSDIYEEKINNFVSDIIKLDYEYDIDRYWLLFYQRFFKDKAPSPYNDKCFDIMKGYGVDFMPDENYKTKAESYCHVVNNPFLEDGDEIVSFNDYMAIA
Reverse transcriptase domain-containing protein D 549 Escherichia Coli HHHHHHSSGMVIFDEKRHLYEALLRHNYFPNQKGSISEIPPCFSSRTFTPEIAELISSDTSGRRSLQGYDCVEYYATRYNNFPRTLSIIHPKAYSKLAKHIHDNWEEIRFIKENENSMIKPDMHADGRIIIMNYEDAETKTIRELNDGFGRRFKVNADISGCFTNIYSHSIPWAVIGVNNAKIALNTKVKNQDKHWSDKLDYFQRQAKRNETHGVPIGPATSSIVCEIILSAVDKRLRDDGFLFRRYIDDYTCYCKTHDDAKEFLHLLGMELSKYKLSLNLHKTKITNLPGTLNDNWVSLLNVNSPTKKRFTDQDLNKLSSSEVINFLDYAVQLNTQVGGGSILKYAISLVINNLDEYTITQVYDYLLNLSWHYPMLIPYLGVLIEHVYLDDGDEYKNKFNEILSMCAENKCSDGMAWTLYFCIKNNIDIDDDVIEKIICFGDCLSLCLLDSSDIYEEKINNFVSDIIKLDYEYDIDRYWLLFYQRFFKDKAPSPYNDKCFDIMKGYGVDFMPDENYKTKAESYCHVVNNPFLEDGDEIVSFNDYMAIA
Reverse transcriptase domain-containing protein F 549 Escherichia Coli HHHHHHSSGMVIFDEKRHLYEALLRHNYFPNQKGSISEIPPCFSSRTFTPEIAELISSDTSGRRSLQGYDCVEYYATRYNNFPRTLSIIHPKAYSKLAKHIHDNWEEIRFIKENENSMIKPDMHADGRIIIMNYEDAETKTIRELNDGFGRRFKVNADISGCFTNIYSHSIPWAVIGVNNAKIALNTKVKNQDKHWSDKLDYFQRQAKRNETHGVPIGPATSSIVCEIILSAVDKRLRDDGFLFRRYIDDYTCYCKTHDDAKEFLHLLGMELSKYKLSLNLHKTKITNLPGTLNDNWVSLLNVNSPTKKRFTDQDLNKLSSSEVINFLDYAVQLNTQVGGGSILKYAISLVINNLDEYTITQVYDYLLNLSWHYPMLIPYLGVLIEHVYLDDGDEYKNKFNEILSMCAENKCSDGMAWTLYFCIKNNIDIDDDVIEKIICFGDCLSLCLLDSSDIYEEKINNFVSDIIKLDYEYDIDRYWLLFYQRFFKDKAPSPYNDKCFDIMKGYGVDFMPDENYKTKAESYCHVVNNPFLEDGDEIVSFNDYMAIA
Reverse transcriptase domain-containing protein H 549 Escherichia Coli HHHHHHSSGMVIFDEKRHLYEALLRHNYFPNQKGSISEIPPCFSSRTFTPEIAELISSDTSGRRSLQGYDCVEYYATRYNNFPRTLSIIHPKAYSKLAKHIHDNWEEIRFIKENENSMIKPDMHADGRIIIMNYEDAETKTIRELNDGFGRRFKVNADISGCFTNIYSHSIPWAVIGVNNAKIALNTKVKNQDKHWSDKLDYFQRQAKRNETHGVPIGPATSSIVCEIILSAVDKRLRDDGFLFRRYIDDYTCYCKTHDDAKEFLHLLGMELSKYKLSLNLHKTKITNLPGTLNDNWVSLLNVNSPTKKRFTDQDLNKLSSSEVINFLDYAVQLNTQVGGGSILKYAISLVINNLDEYTITQVYDYLLNLSWHYPMLIPYLGVLIEHVYLDDGDEYKNKFNEILSMCAENKCSDGMAWTLYFCIKNNIDIDDDVIEKIICFGDCLSLCLLDSSDIYEEKINNFVSDIIKLDYEYDIDRYWLLFYQRFFKDKAPSPYNDKCFDIMKGYGVDFMPDENYKTKAESYCHVVNNPFLEDGDEIVSFNDYMAIA
Reverse transcriptase domain-containing protein K 549 Escherichia Coli HHHHHHSSGMVIFDEKRHLYEALLRHNYFPNQKGSISEIPPCFSSRTFTPEIAELISSDTSGRRSLQGYDCVEYYATRYNNFPRTLSIIHPKAYSKLAKHIHDNWEEIRFIKENENSMIKPDMHADGRIIIMNYEDAETKTIRELNDGFGRRFKVNADISGCFTNIYSHSIPWAVIGVNNAKIALNTKVKNQDKHWSDKLDYFQRQAKRNETHGVPIGPATSSIVCEIILSAVDKRLRDDGFLFRRYIDDYTCYCKTHDDAKEFLHLLGMELSKYKLSLNLHKTKITNLPGTLNDNWVSLLNVNSPTKKRFTDQDLNKLSSSEVINFLDYAVQLNTQVGGGSILKYAISLVINNLDEYTITQVYDYLLNLSWHYPMLIPYLGVLIEHVYLDDGDEYKNKFNEILSMCAENKCSDGMAWTLYFCIKNNIDIDDDVIEKIICFGDCLSLCLLDSSDIYEEKINNFVSDIIKLDYEYDIDRYWLLFYQRFFKDKAPSPYNDKCFDIMKGYGVDFMPDENYKTKAESYCHVVNNPFLEDGDEIVSFNDYMAIA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*CP*CP*CP*AP*A)-3') i 5 NA CCCAA
DNA (5'-D(P*CP*CP*CP*AP*A)-3') c 5 NA CCCAA
DNA (5'-D(P*CP*CP*CP*AP*A)-3') e 5 NA CCCAA
DNA (5'-D(P*CP*CP*CP*AP*A)-3') g 5 NA CCCAA
DNA (5'-D(P*CP*CP*CP*AP*A)-3') j 5 NA CCCAA
DNA (5'-D(P*CP*CP*CP*AP*A)-3') l 5 NA CCCAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-06-09
Deposition Author(s): Deng, Z. , Wang, Y.