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9USZ

Cryo-em structure of a17(1-16) peptide-bound d13 trimer from vaccinia virus

PDB DOI: 10.2210/pdb9usz/pdb

Classification: VIRAL PROTEIN
Organism(s): Orthopoxvirus Vaccinia

Deposited: 2025-05-02
Deposition Author(s): Hyun, J.K. , Jang, Y.T. , Jeong, H.S. , Jo, D.G. , Kang, E.S. , Kim, S.M. , Kim, Y.H. , Lee, S.N. , Ryu, B.H. , Sul, J.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.56 Å

Literature

Cryo-em structure of a17(1-16) peptide-bound d13 trimer from vaccinia virus

Hyun, J.K. , Jang, Y.T. , Jeong, H.S. , Jo, D.G. , Kang, E.S. , Kim, S.M. , Kim, Y.H. , Lee, S.N. , Ryu, B.H. , Sul, J.H.

Primary Citation of Related Structures: 9USZ


Proteins
Molecule Chains Sequence Length Organism Sequence
Scaffold protein OPG125 A 552 Orthopoxvirus Vaccinia AMNNTIINSLIGGDDSIKRSNVFAVDSQIPTLYMPQYISLSGVMTNDGPDNQAIASFEIRDQYITALNHLVLSLELPEVKGMGRFGYVPYVGYKCINHVSISSCNGVIWEIEGEELYNNCINNTIALKHSGYSSELNDISIGLTPNDTIKEPSTVYVYIKTPFDVEDTFSSLKLSDSKITVTVTFNPVSDIVIRDSSFDFETFNKEFVYVPELSFIGYMVKNVQIKPSFIEKPRRVIGQINQPTATVTEVHAATSLSVYTKPYYGNTDNKFISYPGYSQDEKDYIDAYVSRLLDDLVIVSDGPPTGYPESAEIVEVPEDGIVSIQDADVYVKIDNVPDNMSVYLHTNLLMFGTRKNSFIYNISKKFSAITGTYSDATKRTIFAHISHSINIIDTSIPVSLWTSQRNVYNGDNRSAESKAKDLFINDPFIKGIDFKNKTDIISRLEVRFGNDVLYSENGPISRIYNELLTKSNNGTRTLTFNFTPKIFFRPTTITANVSRGKDKLSVRVVYSTMDVNHPIYYVQKQLVVVCNDLYKVSYDQGVSITKIMGDNN
Scaffold protein OPG125 B 552 Orthopoxvirus Vaccinia AMNNTIINSLIGGDDSIKRSNVFAVDSQIPTLYMPQYISLSGVMTNDGPDNQAIASFEIRDQYITALNHLVLSLELPEVKGMGRFGYVPYVGYKCINHVSISSCNGVIWEIEGEELYNNCINNTIALKHSGYSSELNDISIGLTPNDTIKEPSTVYVYIKTPFDVEDTFSSLKLSDSKITVTVTFNPVSDIVIRDSSFDFETFNKEFVYVPELSFIGYMVKNVQIKPSFIEKPRRVIGQINQPTATVTEVHAATSLSVYTKPYYGNTDNKFISYPGYSQDEKDYIDAYVSRLLDDLVIVSDGPPTGYPESAEIVEVPEDGIVSIQDADVYVKIDNVPDNMSVYLHTNLLMFGTRKNSFIYNISKKFSAITGTYSDATKRTIFAHISHSINIIDTSIPVSLWTSQRNVYNGDNRSAESKAKDLFINDPFIKGIDFKNKTDIISRLEVRFGNDVLYSENGPISRIYNELLTKSNNGTRTLTFNFTPKIFFRPTTITANVSRGKDKLSVRVVYSTMDVNHPIYYVQKQLVVVCNDLYKVSYDQGVSITKIMGDNN
Scaffold protein OPG125 C 552 Orthopoxvirus Vaccinia AMNNTIINSLIGGDDSIKRSNVFAVDSQIPTLYMPQYISLSGVMTNDGPDNQAIASFEIRDQYITALNHLVLSLELPEVKGMGRFGYVPYVGYKCINHVSISSCNGVIWEIEGEELYNNCINNTIALKHSGYSSELNDISIGLTPNDTIKEPSTVYVYIKTPFDVEDTFSSLKLSDSKITVTVTFNPVSDIVIRDSSFDFETFNKEFVYVPELSFIGYMVKNVQIKPSFIEKPRRVIGQINQPTATVTEVHAATSLSVYTKPYYGNTDNKFISYPGYSQDEKDYIDAYVSRLLDDLVIVSDGPPTGYPESAEIVEVPEDGIVSIQDADVYVKIDNVPDNMSVYLHTNLLMFGTRKNSFIYNISKKFSAITGTYSDATKRTIFAHISHSINIIDTSIPVSLWTSQRNVYNGDNRSAESKAKDLFINDPFIKGIDFKNKTDIISRLEVRFGNDVLYSENGPISRIYNELLTKSNNGTRTLTFNFTPKIFFRPTTITANVSRGKDKLSVRVVYSTMDVNHPIYYVQKQLVVVCNDLYKVSYDQGVSITKIMGDNN
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-05-02
Deposition Author(s): Hyun, J.K. , Jang, Y.T. , Jeong, H.S. , Jo, D.G. , Kang, E.S. , Kim, S.M. , Kim, Y.H. , Lee, S.N. , Ryu, B.H. , Sul, J.H.