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9TM6

Structure of duck rig-i (delta cards) bound to 31-mer rna mismatched hairpin with 5'pppg-c blunt end mimicking the influenza a virus vrna promoter (panhandle) and to adp.

PDB DOI: 10.2210/pdb9tm6/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Anas Platyrhynchos , Synthetic Construct

Deposited: 2025-12-12
Deposition Author(s): Cusack, S. , Ivanov, I.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.982 Å

9tm6
Literature

Structure of duck rig-i (delta cards) bound to 31-mer rna mismatched hairpin with 5'pppg-c blunt end mimicking the influenza a virus vrna promoter (panhandle) and to adp.

Cusack, S. , Ivanov, I.

Primary Citation of Related Structures: 9TM6


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA helicase A 692 Anas Platyrhynchos , Synthetic Construct ETKKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNSFEDGTLTSLSIFTLMIFDQCHNTTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTIYSVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFICTEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQTTGMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRDSRRKEIKPKVVEGQKNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCRNNNCQHDWGITVKYLTFDNLPVIKIKSFVMESTATGTQMDFQKWKSINSSLKNFDVEEMSNLYPPF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
31-mer RNA hairpin with 5'pppG-C blunt end mimicking the influenza A virus vRNA promoter (panhandle) r 30 NA GUAGAAACAAGGGGAAACCCUGCUUUUGCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-12-12
Deposition Author(s): Cusack, S. , Ivanov, I.