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FASTA Sequence PDB Format mmCIF Format
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9T6H

Cryo-em structure of the 70s ribosome from francisella tularensis bound to antibiotics chloramphenicol and gentamicin

PDB DOI: 10.2210/pdb9t6h/pdb

Classification: RIBOSOME
Organism(s): Francisella Tularensis

Deposited: 2025-11-07
Deposition Author(s): Boura, E. , Klima, M. , Silhan, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.4 Å

9t6h
Literature

Cryo-em structure of the 70s ribosome from francisella tularensis bound to antibiotics chloramphenicol and gentamicin

Boura, E. , Klima, M. , Silhan, J.

Primary Citation of Related Structures: 9T6H


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
16S ribosomal RNA a 1528 NA UAAACUGAAGAGUUUGAUCCUGGCUCAGAUUGAACGCUGGUGGCAUGCUUAACACAUGCAAGUCGAACGGUAACAGGUCUUAGGAUGCUGACGAGUGGCGGACGGGUGAGUAACGCGUAGGAAUCUGCCCAUUUGAGGGGGAUACCAGUUGGAAACGACUGUUAAUACCGCAUAAUAUCUGUGGAUUAAAGGUGGCUUUCGGGCUGUCGCAGAUGGAUGAGCCUGCGUUGGAUUAGCUAGUUGGUGGGGUAAGGGCCCACCAAGGCUACGAUCCAUAGCUGAUUUGAGAGGAUGAUCAGCCACAUUGGGACUGAGACACGGCCCAAACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGGGGCAACCCUGAUCCAGCAAUGCCAUGUGUGUGAAGAAGGCCCUAGGGUUGUAAAGCACUUUAGUUGGGGAGGAAAGCCUCAAGGUUAAUAGCCUUGGGGGAGGACGUUACCCAAAGAAUAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGGGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGGGUCUGUAGGUGGUUUGUUAAGUCAGAUGUGAAAGCCCAGGGCUCAACCUUGGAACUGCAUUUGAUACUGGCAAACUAGAGUACGGUAGAGGAAUGGGGAAUUUCUGGUGUAGCGGUGAAAUGCGUAGAGAUCAGAAGGAACACCAAUGGCGAAGGCAACAUUCUGGACCGAUACUGACACUGAGGGACGAAAGCGUGGGGAUCAAACAGGAUUAGAUACCCUGGUAGUCCACGCUGUAAACGAUGAGUACUAGCUGUUGGAGUCGGUGUAAAGGCUCUAGUGGCGCAGCUAACGCGAUAAGUACUCCGCCUGGGGACUACGGCCGCAAGGCUAAAACUCAAAGGAAUUGACGGGGACCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCUGCGAACUUUCUAGAGAUAGAUUGGUGCCUUCGGGAACGCAGUGACAGGUGCUGCACGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCUAUUGAUAGUUACCAUCAUUAAGUUGGGUACUCUAUUAAGACUGCCGCUGACAAGGCGGAGGAAGGUGGGGACGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGGUAUUACAGAGGGCUGCGAAGGUGCGAGCUGGAGCGAAACUCAAAAAGGUACUCUUAGUCCGGAUUGCAGUCUGCAACUCGACUGCAUGAAGUCGGAAUCGCUAGUAAUCGCAGGUCAGAAUACUGCGGUGAAUACGUUCCCGGGUCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCUCCAGAAGUAGAUAGCUUAACGAAUGGGCGUUUACCACGGAGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCCUU

Proteins
Molecule Chains Sequence Length Organism Sequence
Small ribosomal subunit protein uS10 J 105 Francisella Tularensis MAINNQRIRIRLKAFDHKLIDISTQEIVDTAKKTGAQVKGPIPLPVRKEKFTILISPHVNKKARDQYEIRTHKRLIDIVEPTDKTVDALMKLDLASGVDVQISLS
Small ribosomal subunit protein uS11 K 129 Francisella Tularensis MAKSVRSSKKKVKRVVPDAVAHIYSSFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTPFAAQVAAERAADMALEYGVKNVDVLVKGPGSGRDSAIRALNAKNLKVTSITDVTPLPHNGCRPPKKRRV
Small ribosomal subunit protein uS12 L 124 Francisella Tularensis MATINQLVNNPRKRSVVKSKVPALKACPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSRFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTSGVNNRKHGRSKYGTKRPKS
Small ribosomal subunit protein uS13 M 118 Francisella Tularensis MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQTCNVDPTVKIKDLSEEQVESLRTEVAKFTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRKGPRKPIKA
Small ribosomal subunit protein uS14 N 101 Francisella Tularensis MAKKSMIQRELKREKLVAKYAQKRAEFKAIILDINSTEEQIWEAQIKLQKLPVNSSASRVQRRCKVTGRPHAVYRKFGLCRNKLREYAMAGDVPGLKKASW
Small ribosomal subunit protein uS15 O 88 Francisella Tularensis MLTAQDKQKIIKENQLAESDTGSPEVQVALLTARINDLKGHFEAHKKDNHSRRGLLRLVSQRRKLLDYLHDKDVERYRSLIKKLNIRR
Small ribosomal subunit protein bS16 P 82 Francisella Tularensis MVVIRMARGGAKKRSFYRIVVADKRSPRDGRFIEKLGFFNPLAKGGEERLKLDVAKAEAWLAKGAQPSDRVASLIKEAKKAA
Small ribosomal subunit protein uS17 Q 83 Francisella Tularensis MSDKTRLLEGKVSSVAMDKTVVVRAERYVKHPLYGKFVKKTTKYYVHDENNECKEGDVIKFKETRPYSKTKKWCLVDIIHREK
Small ribosomal subunit protein bS18 R 72 Francisella Tularensis MSRRKVCRFTIEGVKEIDYKDVNKLKAYINETGKIVPSRVTGTSAKYQRQLATAIKRARFLALLPYCDRHFN
Small ribosomal subunit protein uS19 S 92 Francisella Tularensis MPRSLKKGPFVDHHLLKKVFEAQESNSKKPIKTWSRRSMIVPDMIGLTIAVHNGQQHVPVLMTEEMVGHKLGEFVVTRNYRGHAADKKAKKK
Small ribosomal subunit protein uS2 B 222 Francisella Tularensis SLMKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGKILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGTLESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVAIVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ
Small ribosomal subunit protein bS20 T 90 Francisella Tularensis MANSKQAKKRIIQAERNRQHNVARRSMMRTFLKKTAYAIEKGDVEAAKENFTKVVPILDKYASKGLIHKNKAARHKSRLSAKIKALATAA
Small ribosomal subunit protein bS21B U 65 Francisella Tularensis MPSVRIKEREPFDVALRRFKRSCEKAGIVSELRRREYFEKPTWARKRKKTAAVKRAHKSNIIVKR
Large ribosomal subunit protein bL27 V 84 Francisella Tularensis MAHKKAGGSTRNGRDSNPKYLGVKRYGGELVKAGTIIIRQRGTKTHPGVNVGCGKDHTLFALKDGTVKFHTGGALNRKFVSIEE
Large ribosomal subunit protein bL28 W 78 Francisella Tularensis MSKVCIVTGKRPATGNNVSHAQNKTKRRFLPNLHAHRFWVESENRYIKLRVSSKGMRIIDKKGIDTVLSDLRAQGHKI
Large ribosomal subunit protein uL29 X 66 Francisella Tularensis MKRKDTLKDYRGKSIDQLQEVKIELLQQLFSLRMQKGTGQLKKNHLFKSAKRDIARINTIISEKNK
Large ribosomal subunit protein uL30 Y 61 Francisella Tularensis MTQAKTFKVTLVKSLIGRKENHIASARGLGLRKINHTVEVLDTPENRGMANKIYYMVKIEG
Large ribosomal subunit protein bL31 Z 72 Francisella Tularensis MRQEIHPKYTEVTVTCSCGNTFVTRSTAGKKEMNIDICSECHPFYTGKQRIVDTAGRVDKFKKRFGGMKKYN
Large ribosomal subunit protein bL32 0 60 Francisella Tularensis MAVQQVKKSRSKRDMRRSHDSLTNPTLSTDKSTGELHLRHHVSPNGFYKGRKVVDTKSED
Large ribosomal subunit protein bL33 1 51 Francisella Tularensis MREKIRLVSSAKTGHFYTTTKNKKEMPNKMEIKKYDPVVRKHVMYKEAKIK
Large ribosomal subunit protein bL34 2 44 Francisella Tularensis MKRTFQPSNLKRKRTHGFRARMKTLSGRKVIRNRRAKGRAKLAA
Small ribosomal subunit protein uS3 C 209 Francisella Tularensis GQKVNPNGIRLGYIRDWRSTWYADSSRYATKLNEDIKVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRADVDYATAEALTTYGVIGVKVWIYKGEILPG
Large ribosomal subunit protein bL35 3 65 Francisella Tularensis MPKLKTKSGAAKRFKKTGKGGFKHRCANRAHINTKMTTKRKRHLRGMNQVAKVDTTSLVQQMPYA
Large ribosomal subunit protein bL36 4 37 Francisella Tularensis MKVRASVKKMCRNCKVIKRNRVVRVICTDPRHKQRQG
Large ribosomal subunit protein uL3 D 210 Francisella Tularensis MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSNVNKPMAGHYAKASVEPGRGLWEFTVDAAAEYQVGSSFDATMFEAGQKVDVRGVSKGKGFQGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVVRVDAENGLLLLKGGIPGSVGGDIIVTPAVKS
Large ribosomal subunit protein uL4 E 207 Francisella Tularensis MDLNIKSLAGQEAGSLGVAEGVFAADYNEALIHQVVVAYMAGARQGTKAQKTRSEVSGGGAKPWRQKGTGRARAGTIRSPIFRKGGVTFAAKPKSYKQKVNRKMYSGAVKSILSELLRSGRMTIVEELKLETPKTREFKSVIDSLGVKDVLFVVGVEEFSENLYLSSRNLKNVAVCDSVEINPVSLVCFENVVLTKKAIKEIEEKLV
Large ribosomal subunit protein uL5 F 179 Francisella Tularensis MARLKDYYQKELVAKLKTELGLDNIMEVPAIKKITLNMGVGDAAKDKKIMTFALNDLTAIAGQKPVVTKSKKSIAGFKIRDGWPIGAKVTLRGDRMYEFLDRLITIAIPRIRDFRGLSAKSFDGRGNYSLGMREQISFPEIDYDKVDSIRGLDISITTTAKNDDQGRALLKAFGFPFKS
Large ribosomal subunit protein uL6 G 178 Francisella Tularensis MSRIGKKPVVIPSGVTINVAAGNKVEVKGAKATLSKTFSTDVTFSVADNVATITPNNNSKNAVAQSGTARAILSNMVEGVSKGFERKLKIIGVGYRAKAQGNELNLTLGFSHPVVYKLPQGITAETPAPTEIILKGADKELLGKVASEVREYRKPEPYKGKGVRYEDEYVAKKEAKKK
Large ribosomal subunit protein bL9 H 151 Francisella Tularensis MQVILKEKVENLGVLGDIVNVKPGYARNFLIPFGKAVQATQANIKAFEAQKAELEKAEKARFEAAVAVADAIKDKVYTIAAQAGEGGKLFGSVGIAEVAEAVSNQSGKKIEKSQVRMPEGVIRSIGEFELTVHVYTDVDADIKVNVVAAEA
Large ribosomal subunit protein uL13 I 142 Francisella Tularensis MKTFTAKPSNIKREWLLIDATDKTLGRLATEVAMILRGKNKPEYTPHMDTGDYVVIVNAEKVAVTGNKRKAKTYYHHTGYIGGIKSVSFEKLIATHPERAIEKAVRGMLPRTPLGRTMFKKLKVYAGEAHPHTAQQPKAHNI
Ribosome hibernation promoting factor 9 98 Francisella Tularensis MNIQITGRHVEVTDSIKNYVNEKVGKVGHYFDNITSTKVILDVEKDHQVAEAIVTVPGSEFVAKAEDKDLYAAIDMLEDKLARQLKKHKDKMRCNHGE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-11-07
Deposition Author(s): Boura, E. , Klima, M. , Silhan, J.