Cryo-em structure of p. abyssi 70s ribosome in complex with hibernation factor hiba (hiba-ul5 conformation)
PDB DOI: 10.2210/pdb9srd/pdb
Classification: RIBOSOME Organism(s): Pyrococcus Abyssi Ge5
Deposited: 2025-09-24 Deposition Author(s): Bourgeois, G. , Madru, C. , Mechulam, Y. , Schmitt, E.
Cryo-em structure of p. abyssi 70s ribosome in complex with hibernation factor hiba (hiba-ul5 conformation)
Bourgeois, G. , Madru, C. , Mechulam, Y. , Schmitt, E.
Primary Citation of Related Structures: 9SRD
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| rRNA 23S | 1 | 3018 | NA | CGAGGGCUCGGGUAGAAGACCNGGUUGAUGGGGCGGGGAUGUAAGCGGGAAGGGUCAACNGACCCGCUUAGUCUGCCGCCCCCAAUCGCCNGAGGUCCUGUCCCCCGAGGGGGUCAGGACACUAAGCCGCCNGGUGGAUGGCUCGGCUCGGGGCGCNGACGAAGGGCGUGGCAAGCUGCGAUAAGCCCCGGCGAGGCGCAGGCAGCNGUCGAACCGGGGAUUCCNGAAUGGGACCUCCNGCGGCUUAUGCCGCACUCCGGGGCAUAAGCCCCGGAGGGGGAACGCGGGGAAUUGAAACAUCUUAGUACCNGCAGGAAAAGAAAGCAAAAGCGAUGCNGUGAGUAGGGGCGACNGAAAGCGGCACAGGGCAAACUGAACCCCGGGCCGACGAGGUUCGGGGGAUGUGGGGUUGUAGGGCCCCCGUAUGAGACCCUCGCGGGUGAAGCNGAAGUCNGCUGGAACGCGGCGCCGGAGAGGGUGAUAGCCCCGUAGGCGUAAGCCCGCAGGGUCUCGGGGGACCCUGAGUACNGUCGGUUGGAUAUCCGGCGGGAAGCUGGGAGGCAUCGGCUCCCAACCCUAAAUACGUCCCGAGACCGAUAGCGAACUAGUACCGUGAGGGAAAGCUGAAAAGCACCCNGGGAGGGGGGUGAAAAGAGCCUGAAACCGGGCGGCGAUAGGAGGGUGCGGCCNGAAAGGAAUGAGCCUCCCCGAAGGAAACCGCGGCGACGCGGGAGUACGAGGGGAGGGGACCGGGGUUGCACCGUCCGUCUUGAAACACGGGGCAGGGAGUUCGCGGCNGUGGCGAGGUUAAGGGGGUUAAGCCCNGUAGCNGCAGGGAAACCGACAUGCCCGCAGCCGGGCCUCGAGCCCGGUGAGGGGCGGGGUGCGAAAGCGCCCGGAGUCACGGCCGCGAGACCNGAAACCGGUCGAUCUAGCCCGGGGCAGGGUGAAGUCCCUCAACAGAGGGAUGGAGGCCNGCUAGGGGUGCUGAUGUGCAGUUCGCUCCCGUGACCCCGGGCUAGGGGUGAAAGGCCAAUCGAGGCNGGAGAUAGCUGGUUCCNGCNGAAUCAUCCCGCAGGAUGGCCUCCCCGGAGGUAGGCGGUGGGGUAGAGCACUGAUUGGGGGUGCAGGGGGCGAAAGCCCCCGGCCCCCUGUCAAACUCCGAACCCACCGCCGCCGUAGAUGGGGGGAGUAGGGUGGCGGUGUAAGCCGUCCACNGAGAGGGGAACAACCCAGACNGGGGUUAAGGCCCCAAAGUGCCGGCUAAGUGUUACUCCAAAGGGUGUCCNGGGCCUUAGACAGCGGGGAGGUAGGCUUAGAAGCAGCCAUCCUUUAAAGAGUGCGUAACAGCUCACCCGUCGAGGUCCGGGGCCCCGAAAAUGGACGGGGCUCAAGCCGGCCGCCGAGACCCCGGCGCACGGACCGAUUGGUCCGUGAUCGGGUAGGCGGGCGUGCNGGUGGCGUAGAAGCCGGGCCGUAAGGUCCGGUGGAGCCGCCGGUAUCGCGGAUCCUGCCGGGAGUAGCAGCGUAGUCGGGUGAGAAUCCNGACNGCNGGAGGGGCCAGGGUUCCACAGGCAAUGGUCGUCAGCNGUGGGUUAGUCGGUCCUAACCCNGCCNGUAACUCGGCGCGGGGGAAAGGGAAACGGGUUAAUAUUCCNGUACNGCGGGGGUAGGUGCGGCAACGCAAGCCNGGAGGGUGACGCCUCGGGGUAGGCGGACCGGCCGAUGAGGCCGGCUAAGCGUAUAAGCCNGGGGAGUGCNGUAAUGGCGAGAACNGGGUGAAAGCGCGAAUGGCCCCCCCGUUAGGGGGGUUCCGCCGAUCCCUGGGGCCCGUGAAAAGCCCUCCGGGAAUUCCGAUCCCCNGCGACNGUACNGAGAACNGACACAGGUGCCCCUGGGUGAGAAGCCUAAGGCGUGUCGGGGGAAACCNGGCNGAGGGAACUCGGCAAACUGGCCCNGUAACUUCGGGAGAAGGGGUGCCUGCGGGUGCGUAACCNGCAGGUCGCAGUGACUAGGGGGGCCNGACUGUUUAAUAAAAACACAGGUCCCAGCUAGCCNGAAAGGGUUUGUACUGGGGCNGACGCCUGCCCAGUGCCGGUAUGUGAAGCCCGGGUACAACCGGGUGAAGCACNGGUAAACGGCGGGGGUAACUAUAACCCUCUUAAGGUAGCGAAAUUCCUUGUCGGUUAAAUGCCGACCUGCAUGAAUGGCGUAACGAGGUCCCCGCUGUCCCCGGCCGGGGCCNGGCGAAACCUCUGCCUGGCGCGCAUGCCAGGGACCCCNGGUGGGAAGCGAAGACCCCAUGGAGCUUUACUGCAGCCUGCNGUUGCCACGCGGCGGGGGGUGCGCAGCGUAGGCGGGAGGCGUCGAAGCCCGGCCUCCGGGUCGGGUGGAGCCGUCCAUGAGACACCGCCCACUCCUCGCCGCGUGGCUAACCCCCGAAAGGGGGGACAGCGGUAGGUGGGCAGUUUGGCUGGGGCGGCACGCCCCNGAAAAGGUAUCGGGGGCGCCCUAAGGUCGGCUCAGGCGGGUCAGGAAUCNGCNGUAGAGUGCAAGGGCAAAAGCNGGCCUGACUGGACCNGUAACAGAGGCGGGUCCAGCCCNGAAAGGGUGGCCUAGCGAACCCCUGUGCCUCCCNGGUGGGGGCCAGGGAUGACAGAAAAGCUACCCUGGGGAUAACAGAGUCGUCUCGGGCGAGAGCCCAUAUCGACCCNGAGGCUUGCUACCUCGCUGUCGGCUCUUCCCAUCCUGGCCCUGCAGCAGGGGCCAAGGGUGGGGGUGUUCACCCAUUAAAGGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUCGGAUGCUAUCUACCGGGGGUGUUGGCNGCCUGAGGGGAAGGUGCCCUUAGUACGAGAGGAACAGGGCGCNGCGGCCUCUGGUCUACNGGUUGUCCUCCNGGGCAUCGCCGGGCAGCUACGCNGCAGCNGAUAAGGCCUGAAGGCAUCUAAGGCNGAAGCGGCCCCNGAAAAUAGGCGGCCGUUC |
| rRNA 16S | 2 | 1512 | NA | GGCCGUACUCCCUUAAUUCNGGUUGAUCCUGCCGGAGGCCACUGCUAUGGGGGUCNGACUAAGCCAUGCGAGUCAAGGGGGCGUCCCUUCUGGGACGCCACCGGCGGACGGCUCAGUAACACGUCGGUAACCUACCCUCGGGAGGGGGAUAACCCCGGGAAACUGGGGCUAAUCCCCCAUAGGCCUGGGGUACUGGAAGGUCCCCAGGCCGAAAGGGAGCCGUAAGGCUCCGCCCGAGGAUGGGCCGGCGGCCGAUUAGGUAGUUGGUGGGGUAACGGCCCACCAAGCNGAAGAUCGGUACGGGCNGUGAGAGCGGGAGCCNGGAGAUGGACACUGAGACACGGGUCCAGGCCCUACGGGGCGCAGCAGGCGCGAAACCUCNGCAAUGCGGGAAACNGCGACGGGGGGACCCCCAGUGCCGUGCCUCUGGCACGGCUUUUCCGGAGUGUAAAAAGCUCCGGGAAUAAGGGCUGGGCAAGGCNGGUGGCAGCCGCCGCGGUAAUACCGGCGGCCNGAGUGGUGGCCACUAUUAUUGGGCCUAAAGCGGCNGUAGCCGGGCCCGUAAGUCCCUGGCGAAAUCCCACGGCUCAACNGUGGGGCUCGCUGGGGAUACUGCGGGCCUUGGGACNGGGAGAGGCNGGGGGUACCCCCGGGGUAGGGGUGAAAUCCUAUAAUCCCGGGGGGACCGCCAGUGGCGAAGGCGCCNGGCUGGAACGGGUCNGACGGUGAGGGCNGAAGGCCAGGGGAGCGAACNGGAUUAGAUACCCGGGUAGUCCUGGCUGUAAAGGAUGCGGGCUAGGUGUCGGGCGAGCUUCGAGCUCGCCCGGUGCNGUAGGGAAGCNGUUAAGCCNGCNGCCUGGGGAGUACGGCNGCAAGGCUGAAACUUAAAGGAAUUGGCGGGGGAGCACUACAAGGGGUGGAGCGUGCGGUUUAAUUGGAUUCAACGCCGGGAACCUCACNGGGGGCGACGGCAGGAUGAAGGCCAGGCUGAAGGUCUUGCCGGACGCGCCGAGAGGAGGUGCAUGGCCGCNGUCAGCUCGUACCGUGAGGCGUCCACUUAAGUGUGGUAACGAGCGAGACCCGCGCCCCCAGUUGCCAGUCCCUCCCGCUCGGGAGGGAGGCACUCUGGGGGGACUGCCGGCGAUAAGCNGGAGGAAGGGGCGGGCGACGGUAGGUCAGUAUGCCCNGAAACCCCCGGGCUACACGCGCGCUACAAUGGGCGGGACAAUGGGUGCNGACCCNGAAAGGGGGAGGUAAUCCCCUAAACCCGCCCUCAGUUCGGAUCGCGGGCUGCAACUCGCCCGCGUGAAGCUGGAAUCCCUAGUACCCGCGCGUCAUCAUCGCGCGGCGAAUACGUCCCUGCUCCUUGCACACACCGCCCGUCACUCCACCCGAGCGGGGCCUAGGUGAGGCCCGAUCUCCUUCGGGAGGUCGGGUCGAGCCUAGGCUCCGUGAGGGGGGAGAAGUCGUAACAAGGUAGCNGUAGGGGAACCUACGGCUCGAUCACCUCCU |
| rRNA 5S | 3 | 128 | NA | ACGGCACGGCGGCCAUAGCGGGGGGGCCACACCNGGUCUCAUUUCGAACCCGGAAGUUAAGCCCCCCAGCGAUCCCGGUUGUACUGCCCUCCGAGAGGGGGCGGGAAGCCGGGGACGCCGCCGGCCAC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 30S ribosomal protein S6e | AG | 125 | Pyrococcus Abyssi Ge5 | MATFKLVISDPKTGIAKQIEITGPEAEKLIGKRIGDQIPVKELGINLNELFGKEFPEDVKMEIRGGTDKDGFPMRPDIHGPRRVRILLSKGPGFRPKEKGERRKKTVRGNTISPEIVQVNVKLVY |
| 30S ribosomal protein S7 | AH | 215 | Pyrococcus Abyssi Ge5 | MAKPLSERFFIPHEIKVMGRWSTEDVEVRDPSLKPYINLEPRLLPHTHGRHAKKHFGKANVHIVERLINKIMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR |
| 30S ribosomal protein S8 | AI | 130 | Pyrococcus Abyssi Ge5 | MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGKINKAGAIKPRFPVKARDYERWEKRFLPAFEFGILIVSTSQGVMSHKEAREKGIGGRLIAYVY |
| 30S ribosomal protein S8e | AJ | 127 | Pyrococcus Abyssi Ge5 | MAIWQGRSLRKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNKKVRLTAAAYANVFDKSGKGRKVRIIRVIENPANRQFARRNIITKGAIIETEIGKAKVTSRPGQDGVVNAILLEE |
| 30S ribosomal protein S9 | AK | 135 | Pyrococcus Abyssi Ge5 | MRIIQTTGKRKTAIARAVIREGKGRVRINGKPVELVEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR |
| 30S ribosomal protein S10 | AL | 102 | Pyrococcus Abyssi Ge5 | MQKARIKLASTNVRSLEEVANQIKQIAERTGVRMSGPIPLPTKRIRIVTRKSPDGEGSATFDRWELRIHKRLIDIEADERAMRQIMRIRVPEDVTIEIELIS |
| 30S ribosomal protein S11 | AM | 137 | Pyrococcus Abyssi Ge5 | MSEEQVNIKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRRGRRV |
| 30S ribosomal protein S12 | AN | 147 | Pyrococcus Abyssi Ge5 | MPGKKAPNGEFAGRKLKLKRKKFRWSDIRYKRRVLRLKEKSDPLEGAPQARGIVLEKIAVEAKQPNSGMRKAVRVQLIKNGKVVTAFCPGDGAIKFIDEHDEVIIEGIGGPKGGSMGDIPGIRYKVVKVNRVSLKELVKGRKEKPRR |
| 30S ribosomal protein S14 type Z | AP | 56 | Pyrococcus Abyssi Ge5 | MAKADYNKRKPRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKYE |
| 30S ribosomal protein S15 | AQ | 158 | Pyrococcus Abyssi Ge5 | MARMHARKRGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKDWRYDPEQAKLLVR |
| 30S ribosomal protein S17 | AR | 113 | Pyrococcus Abyssi Ge5 | MVRDIGLRIQPPAEKCDDPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLKKYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVLERAEERR |
| 30S ribosomal protein S17e | AS | 67 | Pyrococcus Abyssi Ge5 | MGKIRQGFIKRVARELFNKYPNEFTRDFEHNKKKVEELTNVTSKKIRNRIAGYITKLVRMKEEGKIL |
| 30S ribosomal protein S19e | AU | 150 | Pyrococcus Abyssi Ge5 | MATVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYLDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFVEKVPGKGRVITPKGRSFLDKIATELKKELEEIIPELKKY |
| 30S ribosomal protein S24e | AV | 99 | Pyrococcus Abyssi Ge5 | MEIKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGSYKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKKEGE |
| 30S ribosomal protein S24e | B6 | 99 | Pyrococcus Abyssi Ge5 | MEIKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGSYKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKKEGE |
| 30S ribosomal protein S27e | AW | 65 | Pyrococcus Abyssi Ge5 | MALPRNVIPMPRSRFLRVKCIDCGNEQIVFSHPATRVRCNVCGATLVEPTGGKGIIRAKILEVLE |
| 30S ribosomal protein S28e | AX | 71 | Pyrococcus Abyssi Ge5 | MAEDEGYPAEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRVGDILILRETEREAREIKSRR |
| 30S ribosomal protein S27ae | AY | 51 | Pyrococcus Abyssi Ge5 | MGQKWKLYIVKDGKVIRKNKFCPRCGPGVFMADHGDRWACGRCGYTEWKKK |
| 30S ribosomal protein S3 | AZ | 210 | Pyrococcus Abyssi Ge5 | MAIERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLENPQIDVQEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIMPPDARLPDEIEIIEKPVEEEVSSNEAE |
| Small ribosomal subunit protein eS32 | A0 | 37 | Pyrococcus Abyssi Ge5 | MKRRPRKWKKKGRMRWKWIKKRIRRLKRQRKKERGLI |
| 50S ribosomal protein L7Ae | A3 | 123 | Pyrococcus Abyssi Ge5 | MAKPSYVKFEVPKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKARDLVEEIAMKVRELMK |
| Large ribosomal subunit protein eL40 | BG | 51 | Pyrococcus Abyssi Ge5 | MARFPEAEARIFKKYICLRCGATNPWGAEKCRKCGYKRLRPKAREPRGGGR |
| 50S ribosomal protein L7Ae | B4 | 123 | Pyrococcus Abyssi Ge5 | MAKPSYVKFEVPKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKARDLVEEIAMKVRELMK |
| 30S ribosomal protein S19 | AT | 132 | Pyrococcus Abyssi Ge5 | MARKEFRYRGYTLEQLMNMSLEELAKLLPARQRRSLKRGLTPEQKKLLRKIRLAKKGKYNKPIRTHCRDMIVLPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKRVQHGAPGIGATRSSMFVAVK |
| 30S ribosomal protein S13 | AO | 148 | Pyrococcus Abyssi Ge5 | MADFRHIVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQRTRSNFRRGQTVGVSRKKK |
| Large ribosomal subunit protein eL32 | BB | 130 | Pyrococcus Abyssi Ge5 | MDEKEFKRLLRVRARLKRKKPRFLRQEWWRYPKFKNDPKWRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELEKLDPKRQAARIAHTVGKKKRIEILKRAQELGIKVLNPQL |
| Large ribosomal subunit protein uL30 | BY | 155 | Pyrococcus Abyssi Ge5 | MAKLAVIRIRGRVNVKRPVRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAETLAKLIRKRGRLIGNKPVTDEYVKEKLGMTIEEFAQKVINGEMSLKDLPNLKPVFRLHPPRGGFRGSKKRSFKEGGALGYRGEKINDLIERML |
| Large ribosomal subunit protein uL18 | BO | 203 | Pyrococcus Abyssi Ge5 | MAHGPRYRVPFRRRREGKTNYRKRLKLLKSGKPRLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDFGWKGHCGNTPSAYLLGLLIGYKAKKAGIEEAILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFPEDYRIRGEHIAEYARMLKEQDEEKFRRQFGGYLEKGLDPEKLPEHFDEVKARIIEKFESEGARE |
| Large ribosomal subunit protein eL33 | BC | 87 | Pyrococcus Abyssi Ge5 | MRIKGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIWKSPSGKLLKGKIVRVHGTKGAVRARFEKGLPGQALGDYVEII |
| Large ribosomal subunit protein eL14 | B5 | 82 | Pyrococcus Abyssi Ge5 | MPAIDVGRIAVIIAGRRAGQKCVIVDIIDKNFVLVTGAGLNKVKRRRMNIKHLEPLPEKIDIPRGASDEEVKAALEKAGISL |
| C2H2-type domain-containing protein | BK | 65 | Pyrococcus Abyssi Ge5 | MVRLKAIIVRDRDGEEFLRCPRCGMVFKRRKDYIKHVNKAHGWLFGRGKPKGKRLKKKYSKLLSQ |
| Large ribosomal subunit protein eL20 | BL | 77 | Pyrococcus Abyssi Ge5 | MNVKVFRVSGYFEKNGRKFKFTKEYRALKEEHVKELVYSDIGSKHKVKRRKIFIKEIKEIRPEEAEDIVVRRLSLEL |
| Large ribosomal subunit protein uL6 | BF | 184 | Pyrococcus Abyssi Ge5 | MPVDAWVREEIEIPEGVEVSVQGNTVKVKGPKGEVERELFWPGVKIFVEGGKVVIYKDFPRRKDVAIVRTFKAHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDEVIIENFLGEKAPRRAKILPGVTVKVKGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEKAGKPITF |
| Large ribosomal subunit protein uL24 | BU | 121 | Pyrococcus Abyssi Ge5 | MRLNSKQPRKQRKFLYNAPLHLRQKMMAAPLSKELREKYKIRNLPVRVGDKVRIMRGDFKGHEGKVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMIIELNLDDERRKKIIERRAG |
| 30S ribosomal protein S3Ae | AA | 199 | Pyrococcus Abyssi Ge5 | MAAKRRVSAAKDKWKLKQWYVIYAPDFFGGVEVGLTPADDPEKVLNRVVEVTLKDITGDFLKGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVIAARRIQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAKKIYPLKKAEIRKIKVLGEPEVAA |
| Large ribosomal subunit protein uL5 | BE | 188 | Pyrococcus Abyssi Ge5 | MAITIPNREEILADWEAHPMRKPRIEKVTINIGVGESGERLTKAEIMLERLTGQKPIRRKAKKTNRDFGIRRGEPIAVKVTLRGPKAYEMLKRLLAAVDNRLKASSFDEHGNVCFGIDEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVYMMEEFGVEIVEEEG |
| Large ribosomal subunit protein eL31 | BA | 94 | Pyrococcus Abyssi Ge5 | MPIKPGEEVIFTVPIRKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIISTKVNEKIWERGIEKPPSRLRVKVKVEEEDRDGKKVRIAYVDLA |
| Large ribosomal subunit protein uL23 | BT | 86 | Pyrococcus Abyssi Ge5 | MDPYKVIIRPVITDKAISLIEKENKLTFIVDRRATKQDIKRAIEEIFNVKVEKVNTLITPKGEKKAYVKLKPEYSASEIAARLGLF |
| Large ribosomal subunit protein uL29 | BW | 68 | Pyrococcus Abyssi Ge5 | MKPSEIREMSIEEIDAKIRELRLQLAKERGMLTMGTSLENPMVIRNLRRDIARLLTIKREKLREMRKK |
| Large ribosomal subunit protein uL13 | BI | 142 | Pyrococcus Abyssi Ge5 | MRIINAEGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPRRGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFKRLKVYVGIPKEFKDKQLETIVEAHVSRLSRPKYVTVGEVAKFLGGKF |
| Large ribosomal subunit protein eL21 | BR | 97 | Pyrococcus Abyssi Ge5 | MVQKAHSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTVVGKRGDAYIVEVPDGNKVKTLFIHPVHLRPQK |
| Large ribosomal subunit protein eL19 | BQ | 151 | Pyrococcus Abyssi Ge5 | MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR |
| 30S ribosomal protein S2 | AB | 202 | Pyrococcus Abyssi Ge5 | MADEYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFDPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPVEEFEMKIVRR |
| Large ribosomal subunit protein eL24 | BV | 67 | Pyrococcus Abyssi Ge5 | MARWNVCSYCGKPFEPGTGKMFVRNDGRVLFFCSRKCERYYFMGRNPRKLKWTKAYQEARLQRGIRK |
| Large ribosomal subunit protein uL14 | BJ | 141 | Pyrococcus Abyssi Ge5 | MAKKGAGATRGITPVRPTRAIPVGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVRIGSIASIIV |
| Large ribosomal subunit protein eL34 | BD | 91 | Pyrococcus Abyssi Ge5 | MKPMYRSRSWRRKYVRTPGGRVVIHFERRKPKIAHCAICGRPLNGIPRGRPVEMRKLPKTKKRPERPYPHLCPKCMRRVMKEQVRAQIMKG |
| Large ribosomal subunit protein eL30 | BZ | 99 | Pyrococcus Abyssi Ge5 | MDLAFELRKALETGKVILGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELGTLLGKPFVVASLAIVDPGESRILALAKR |
| Large ribosomal subunit protein eL18 | BP | 120 | Pyrococcus Abyssi Ge5 | MKRTGPTDPNLRRLIRYLRKKSNEEKVKIWKDIAWRLERPRRQRAEVNVSRINRYAKDGDMIVVPGSVLGAGKIEKKVIVAAWKFSETARRKIEEAGGEAITIEELIKRNPKGSGVIIME |
| Large ribosomal subunit protein eL15 | BM | 194 | Pyrococcus Abyssi Ge5 | MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPAVVRIERPTRLDRARALGYQAKQGYVIVRVRVRRGGRKRPRWKGGRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRANEGKGK |
| Large ribosomal subunit protein uL22 | BS | 155 | Pyrococcus Abyssi Ge5 | MGRRFDYSFQNFDPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRPVPLKRYNDSQGHKPGKGFGPGRYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVVVEEVRR |
| Large ribosomal subunit protein uL16 | BN | 181 | Pyrococcus Abyssi Ge5 | MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEGNDVTTKILSQGL |
| Zn-ribbon RNA-binding protein involved in translation | AC | 63 | Pyrococcus Abyssi Ge5 | MAENVELKFEIPVCTSCGREITPREHATHFVCPNCGEAIIWRCETCRLLAKPYKCPKCGWEGP |
| Dehydrogenase | H | 392 | Pyrococcus Abyssi Ge5 | MVGIQVQEVMTDRYAKIDINAPLSEAIGIIEKEDPDLILVFDDNVYKGVLTQDLIIRSHLKWDPTKAKVRDVYKPAPVVKPTDDLSHAAKLLLETDLRSLPVGENKAEILGVISDMALLERVVAEEFGKRKVEEFMTKDVITLGPDDTVAKALATMRDHGISRIPVVDEEGKLEGLVTLHDLIIRFIKPRFKAQYGELAGEKIPPFSMKLREAMIKGVITIMPEATIREAVSTMKDNNIDGLVVVDENNKVVGILTVKDLLLPISRMVEKEARFYLQLGGDASALSEFTRERIINDIKRFVDGYADLLGNEGIIYLYIRRFNEKFRGVHLYQARMRVVTDRGVFIARGETWGAIQAVHDAIRAIERQLLQKAELERDIRYAKRFIEKLELWR |
| 30S ribosomal protein S4 | AD | 180 | Pyrococcus Abyssi Ge5 | MGDPKRQRKKYETPPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAEIEREQLLARLKRLGLLPEDAVLDDVLSLTIEDILERRLQTIVYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLVLKEEEDTITYARTSPFANPQHPERMMIEKAKQGGEA |
| 30S ribosomal protein S4e | AE | 243 | Pyrococcus Abyssi Ge5 | MARKGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEANIKPLRIRNKRMVKGAKIQLNFHDGTNHLIPLSEKDNYFTSYTVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVGRDKPRISLP |
| 30S ribosomal protein S5 | AF | 236 | Pyrococcus Abyssi Ge5 | MSQEWKEYAKRVLDEWQPKTKLGMLVKEGQITDIHEIFRKGYQIKEPEIIDVLLPEVNARENQEILDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFTVEGKEGSVRVKLIPGPRGLGLVIGDVGKKILRLAGIQDVWSQTLGETRTTVNFAKAVFNALYNTNKVVVTPEMIERYGIVVGRAMPASFTLE |
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-09-24 Deposition Author(s): Bourgeois, G. , Madru, C. , Mechulam, Y. , Schmitt, E.