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FASTA Sequence PDB Format mmCIF Format
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9S6Y

Cryoem structure of wiv1 spike monomer in complex with neutralizing antibody v1wt_06

PDB DOI: 10.2210/pdb9s6y/pdb

Classification: IMMUNE SYSTEM
Organism(s): Bat Sars-Like Coronavirus Wiv1 , Homo Sapiens

Deposited: 2025-08-01
Deposition Author(s): Alguel, Y. , Cherepanov, P. , Upadhyay, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.98 Å

9s6y
Literature

Cryoem structure of wiv1 spike monomer in complex with neutralizing antibody v1wt_06

Alguel, Y. , Cherepanov, P. , Upadhyay, A.

Primary Citation of Related Structures: 9S6Y


Proteins
Molecule Chains Sequence Length Organism Sequence
V1WT_06 Antibody Light Chain A 220 Bat Sars-Like Coronavirus Wiv1 , Homo Sapiens GDIVMTQTPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCMQATQFPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
V1WT_06 Antibody Heavy Chain B 250 Bat Sars-Like Coronavirus Wiv1 , Homo Sapiens EVQLVQSGAEVKKPGASVKVSCKASGYTFSSHGISWVRQAPGQGLEWMGWISTYNGNTNSAQNLQGRVTMTADTSTSTAYMELRSLRSDDTAVYYCARGPWGYCSGTSCYYWTPDNPAYSYHGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDGTKHHHHHH
Spike glycoprotein C 1239 Bat Sars-Like Coronavirus Wiv1 , Homo Sapiens MKLLVLVFATLVSSYTIEKCLDFDDRTPPANTQFLSSHRGVYYPDDIFRSNVLHLVQDHFLPFDSNVTRFITFGLNFDNPIIPFKDGIYFAATEKSNVIRGWVFGSTMNNKSQSVIIMNNSTNLVIRACNFELCDNPFFVVLKSNNTQIPSYIFNNAFNCTFEYVSKDFNLDLGEKPGNFKDLREFVFRNKDGFLHVYSGYQPISAASGLPTGFNALKPIFKLPLGINITNFRTLLTAFPPRPDYWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVAPSKEVVRFPNITNLCPFGEVFNATTFPSVYAWERKRISNCVADYSVLYNSTSFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFTGCVLAWNTRNIDATQTGNYNYKYRSLRHGKLRPFERDISNVPFSPDGKPCTPPAFNCYWPLNDYGFYITNGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNTSSEVAVLYQDVNCTDVPVAIHADQLTPSWRVHSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSSLSSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAVEQDRNTREVFAQVKQMYKTPTLKDFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGSCDVVIGIINNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQSGRENLYFQGGGGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-08-01
Deposition Author(s): Alguel, Y. , Cherepanov, P. , Upadhyay, A.