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9S6T
Ternary cryo-em structure of chicken alg12 with dol25-pp-glcnac2man7, dol25-p-man, and fab
PDB DOI: 10.2210/pdb9s6t/pdb
Classification: TRANSFERASE Organism(s): Gallus Gallus , Synthetic Construct
Deposited: 2025-08-01 Deposition Author(s): Aebi, M. , Agrawal, P. , Alexander, J.A.N. , Chen, S.Y. , De Capitani, M. , Irobalieva, R.N. , Kossiakoff, A.A. , Kowal, J. , Locher, K.P. , Meirelles, M.A. , Mukherjee, S. , Reymond, J.L. , Riniker, S. , Rossi, L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.42 Å
Ternary cryo-em structure of chicken alg12 with dol25-pp-glcnac2man7, dol25-p-man, and fab
Aebi, M. , Agrawal, P. , Alexander, J.A.N. , Chen, S.Y. , De Capitani, M. , Irobalieva, R.N. , Kossiakoff, A.A. , Kowal, J. , Locher, K.P. , Meirelles, M.A. , Mukherjee, S. , Reymond, J.L. , Riniker, S. , Rossi, L.
Primary Citation of Related Structures: 9S6T
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Mannosyltransferase | A | 496 | Gallus Gallus , Synthetic Construct | GPGGSTMAQKRSSSGRSFPLLLLIIVVAFVHLTVCPFTKVQESFNLQAIHDVVYHQLDLDKYDHHEFPGVVPRTFLGPIFIAALSSPAIYILSLLKMSKFYSQLIVRGSLGLSVIYTLWKLQKEVRKQFGATTSTVFCLITVTQFHLMFYCTRTLPNVFALPFVLLALTFWIQQKQRPFIWFSALAIIVFRSELAIFLGLMLLVTFLTKRISVLKILSHAVPAGFFWLGLTVAVDSLFWRQLVWPEGKVLWYNTILNKSSNWGTSPFFWYFYSALPRALGCSIVFVPLGAAEKRTRILLLPALGFIFLYSFLPHKELRFIIYTFPVFNIVAAKVCSRILNNYRKSWLYKLGSLFVVMHLLVNAAYSGTSLYVSHFNYPGGVAIQKLHELVPSTAEVSVHIDVAAAQTGVSRFLEINSDWRYDKREDVKPGDQLMFSYTHILMETNPLQISHYKTTHRPLANIPGISKIGLNLTALPPFTLNLKPKLVLLEKLPLSS |
| Gg12-11 Fab heavy chain | H | 234 | Gallus Gallus , Synthetic Construct | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASISSYYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYWDWWRGGWAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT |
| Gg12-11 Fab light chain | L | 215 | Gallus Gallus , Synthetic Construct | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSYDPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-08-01 Deposition Author(s): Aebi, M. , Agrawal, P. , Alexander, J.A.N. , Chen, S.Y. , De Capitani, M. , Irobalieva, R.N. , Kossiakoff, A.A. , Kowal, J. , Locher, K.P. , Meirelles, M.A. , Mukherjee, S. , Reymond, J.L. , Riniker, S. , Rossi, L.