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FASTA Sequence PDB Format mmCIF Format
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9S1F

Cryo-em structure of activated retron eco2 (ec67)

PDB DOI: 10.2210/pdb9s1f/pdb

Classification: ANTIVIRAL PROTEIN
Organism(s): Escherichia Coli Nctc 86

Deposited: 2025-07-18
Deposition Author(s): Grigaitis, R. , Jasnauskaite, M. , Malinauskaite, L. , Pausch, P. , Skorupskaite, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

9s1f
Literature

Cryo-em structure of activated retron eco2 (ec67)

Grigaitis, R. , Jasnauskaite, M. , Malinauskaite, L. , Pausch, P. , Skorupskaite, A.

Primary Citation of Related Structures: 9S1F


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (132-MER) d 132 NA CACGCAUGUAGGCAGAUUUGUUGGUUGUGAAUCGCAACCAGUGGCCUUAAUGGCAGGAGGAAUCGCCUCCCUAAAAUCCUUGAUUCAGAGCUAUACGGCAGGUGUGCUGUGCGAAGGAGUGCCUGCAUGCGU
RNA (132-MER) e 132 NA CACGCAUGUAGGCAGAUUUGUUGGUUGUGAAUCGCAACCAGUGGCCUUAAUGGCAGGAGGAAUCGCCUCCCUAAAAUCCUUGAUUCAGAGCUAUACGGCAGGUGUGCUGUGCGAAGGAGUGCCUGCAUGCGU
RNA (132-MER) f 132 NA CACGCAUGUAGGCAGAUUUGUUGGUUGUGAAUCGCAACCAGUGGCCUUAAUGGCAGGAGGAAUCGCCUCCCUAAAAUCCUUGAUUCAGAGCUAUACGGCAGGUGUGCUGUGCGAAGGAGUGCCUGCAUGCGU
msDNA (67-MER) g 67 NA TCCTTCGCACAGCACACCTGCCGTATAGCTCTGAATCAAGGATTTTAGGGAGGCGATTCCTCCTGCC
msDNA (67-MER) i 67 NA TCCTTCGCACAGCACACCTGCCGTATAGCTCTGAATCAAGGATTTTAGGGAGGCGATTCCTCCTGCC
msDNA (67-MER) h 67 NA TCCTTCGCACAGCACACCTGCCGTATAGCTCTGAATCAAGGATTTTAGGGAGGCGATTCCTCCTGCC

Proteins
Molecule Chains Sequence Length Organism Sequence
Retron Ec67 protein B 596 Escherichia Coli Nctc 86 MTKTSKLDALRAATSREDLAKILDVKLVFLTNVLYRIGSDNQYTQFTIPKKGKGVRTISAPTDRLKDIQRRICDLLSDCRDEIFAIRKISNNYSFGFERGKSIILNAYKHRGKQIILNIDLKDFFESFNFGRVRGYFLSNQDFLLNPVVATTLAKAACYNGTLPQGSPCSPIISNLICNIMDMRLAKLAKKYGCTYSRYADDITISTNKNTFPLEMATVQPEGVVLGKVLVKEIENSGFEINDSKTRLTYKTSRQEVTGLTVNRIVNIDRCYYKKTRALAHALYRTGEYKVPDENGVLVSGGLDKLEGMFGFIDQVDKFNNIKKKLNKQPDRYVLTNATLHGFKLKLNAREKAYSKFIYYKFFHGNTCPTIITEGKTDRIYLKAALHSLETSYPELFREKTDSKKKEINLNIFKSNEKTKYFLDLSGGTADLKKFVERYKNNYASYYGSVPKQPVIMVLDNDTGPSDLLNFLRNKVKSCPDDVTEMRKMKYIHVFYNLYIVLTPLSPSGEQTSMEDLFPKDILDIKIDGKKFNKNNDGDSKTEYGKHIFSMRVVRDKKRKIDFKAFCCIFDAIKDIKEHYKLMLNSGSWSHPQFEK
Retron Ec67 protein A 596 Escherichia Coli Nctc 86 MTKTSKLDALRAATSREDLAKILDVKLVFLTNVLYRIGSDNQYTQFTIPKKGKGVRTISAPTDRLKDIQRRICDLLSDCRDEIFAIRKISNNYSFGFERGKSIILNAYKHRGKQIILNIDLKDFFESFNFGRVRGYFLSNQDFLLNPVVATTLAKAACYNGTLPQGSPCSPIISNLICNIMDMRLAKLAKKYGCTYSRYADDITISTNKNTFPLEMATVQPEGVVLGKVLVKEIENSGFEINDSKTRLTYKTSRQEVTGLTVNRIVNIDRCYYKKTRALAHALYRTGEYKVPDENGVLVSGGLDKLEGMFGFIDQVDKFNNIKKKLNKQPDRYVLTNATLHGFKLKLNAREKAYSKFIYYKFFHGNTCPTIITEGKTDRIYLKAALHSLETSYPELFREKTDSKKKEINLNIFKSNEKTKYFLDLSGGTADLKKFVERYKNNYASYYGSVPKQPVIMVLDNDTGPSDLLNFLRNKVKSCPDDVTEMRKMKYIHVFYNLYIVLTPLSPSGEQTSMEDLFPKDILDIKIDGKKFNKNNDGDSKTEYGKHIFSMRVVRDKKRKIDFKAFCCIFDAIKDIKEHYKLMLNSGSWSHPQFEK
Retron Ec67 protein C 596 Escherichia Coli Nctc 86 MTKTSKLDALRAATSREDLAKILDVKLVFLTNVLYRIGSDNQYTQFTIPKKGKGVRTISAPTDRLKDIQRRICDLLSDCRDEIFAIRKISNNYSFGFERGKSIILNAYKHRGKQIILNIDLKDFFESFNFGRVRGYFLSNQDFLLNPVVATTLAKAACYNGTLPQGSPCSPIISNLICNIMDMRLAKLAKKYGCTYSRYADDITISTNKNTFPLEMATVQPEGVVLGKVLVKEIENSGFEINDSKTRLTYKTSRQEVTGLTVNRIVNIDRCYYKKTRALAHALYRTGEYKVPDENGVLVSGGLDKLEGMFGFIDQVDKFNNIKKKLNKQPDRYVLTNATLHGFKLKLNAREKAYSKFIYYKFFHGNTCPTIITEGKTDRIYLKAALHSLETSYPELFREKTDSKKKEINLNIFKSNEKTKYFLDLSGGTADLKKFVERYKNNYASYYGSVPKQPVIMVLDNDTGPSDLLNFLRNKVKSCPDDVTEMRKMKYIHVFYNLYIVLTPLSPSGEQTSMEDLFPKDILDIKIDGKKFNKNNDGDSKTEYGKHIFSMRVVRDKKRKIDFKAFCCIFDAIKDIKEHYKLMLNSGSWSHPQFEK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-07-18
Deposition Author(s): Grigaitis, R. , Jasnauskaite, M. , Malinauskaite, L. , Pausch, P. , Skorupskaite, A.