Crystal structure of ara h 2 immunocomplex with ige fab fragment
PDB DOI: 10.2210/pdb9rtg/pdb
Classification: IMMUNE SYSTEM Organism(s): Arachis Hypogaea , Homo Sapiens
Deposited: 2025-07-02 Deposition Author(s): Parkkinen, T. , Rouvinen, J.
Crystal structure of ara h 2 immunocomplex with ige fab fragment
Primary Citation of Related Structures: 9RTG
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| D08 IgE Fab fragment, L-chain | A | 216 | Arachis Hypogaea , Homo Sapiens | EVVLTQSPATLSLSPGERATLSCRTSQAISNNFLAWYQQRPGQPPRLLIYASSRRATDTPDRFTGSGSGTDFTLTITRLEPEDFAVYFCQYYSDSPPYTFGPGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| D08 IgE Fab fragment, L-chain | C | 216 | Arachis Hypogaea , Homo Sapiens | EVVLTQSPATLSLSPGERATLSCRTSQAISNNFLAWYQQRPGQPPRLLIYASSRRATDTPDRFTGSGSGTDFTLTITRLEPEDFAVYFCQYYSDSPPYTFGPGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| D08 IgE Fab fragment, L-chain | E | 216 | Arachis Hypogaea , Homo Sapiens | EVVLTQSPATLSLSPGERATLSCRTSQAISNNFLAWYQQRPGQPPRLLIYASSRRATDTPDRFTGSGSGTDFTLTITRLEPEDFAVYFCQYYSDSPPYTFGPGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| D08 IgE Fab fragment, L-chain | G | 216 | Arachis Hypogaea , Homo Sapiens | EVVLTQSPATLSLSPGERATLSCRTSQAISNNFLAWYQQRPGQPPRLLIYASSRRATDTPDRFTGSGSGTDFTLTITRLEPEDFAVYFCQYYSDSPPYTFGPGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| D08 IgE Fab fragment, L-chain | I | 216 | Arachis Hypogaea , Homo Sapiens | EVVLTQSPATLSLSPGERATLSCRTSQAISNNFLAWYQQRPGQPPRLLIYASSRRATDTPDRFTGSGSGTDFTLTITRLEPEDFAVYFCQYYSDSPPYTFGPGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| D08 IgE Fab fragment, L-chain | K | 216 | Arachis Hypogaea , Homo Sapiens | EVVLTQSPATLSLSPGERATLSCRTSQAISNNFLAWYQQRPGQPPRLLIYASSRRATDTPDRFTGSGSGTDFTLTITRLEPEDFAVYFCQYYSDSPPYTFGPGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| D08 IgE Fab fragment, H-chain | B | 233 | Arachis Hypogaea , Homo Sapiens | QVQLVESGGGVVQPGKSLRLSCAASAFTFRRFAMHWVRQAPGKGLEWVAVISDNGLREDYEDSVKGRFTISRDNSQNTLYLQMNGLRAEDTAVYYCAKVLDYNEYSLYFGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCHHHHHH |
| D08 IgE Fab fragment, H-chain | D | 233 | Arachis Hypogaea , Homo Sapiens | QVQLVESGGGVVQPGKSLRLSCAASAFTFRRFAMHWVRQAPGKGLEWVAVISDNGLREDYEDSVKGRFTISRDNSQNTLYLQMNGLRAEDTAVYYCAKVLDYNEYSLYFGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCHHHHHH |
| D08 IgE Fab fragment, H-chain | F | 233 | Arachis Hypogaea , Homo Sapiens | QVQLVESGGGVVQPGKSLRLSCAASAFTFRRFAMHWVRQAPGKGLEWVAVISDNGLREDYEDSVKGRFTISRDNSQNTLYLQMNGLRAEDTAVYYCAKVLDYNEYSLYFGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCHHHHHH |
| D08 IgE Fab fragment, H-chain | H | 233 | Arachis Hypogaea , Homo Sapiens | QVQLVESGGGVVQPGKSLRLSCAASAFTFRRFAMHWVRQAPGKGLEWVAVISDNGLREDYEDSVKGRFTISRDNSQNTLYLQMNGLRAEDTAVYYCAKVLDYNEYSLYFGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCHHHHHH |
| D08 IgE Fab fragment, H-chain | J | 233 | Arachis Hypogaea , Homo Sapiens | QVQLVESGGGVVQPGKSLRLSCAASAFTFRRFAMHWVRQAPGKGLEWVAVISDNGLREDYEDSVKGRFTISRDNSQNTLYLQMNGLRAEDTAVYYCAKVLDYNEYSLYFGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCHHHHHH |
| D08 IgE Fab fragment, H-chain | L | 233 | Arachis Hypogaea , Homo Sapiens | QVQLVESGGGVVQPGKSLRLSCAASAFTFRRFAMHWVRQAPGKGLEWVAVISDNGLREDYEDSVKGRFTISRDNSQNTLYLQMNGLRAEDTAVYYCAKVLDYNEYSLYFGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCHHHHHH |
| Conglutin-7 | X | 152 | Arachis Hypogaea , Homo Sapiens | ARQQWELQGDRRCQSQLERANLRPCEQHLMQKIQRDEDSYGRDPYSPSQDPYSPSQDPDRRDPYSPSPYDRRGAGSSQHQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLEVESGGRDRY |
| Conglutin-7 | M | 152 | Arachis Hypogaea , Homo Sapiens | ARQQWELQGDRRCQSQLERANLRPCEQHLMQKIQRDEDSYGRDPYSPSQDPYSPSQDPDRRDPYSPSPYDRRGAGSSQHQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLEVESGGRDRY |
Method: X-RAY DIFFRACTION
Deposited Date: 2025-07-02 Deposition Author(s): Parkkinen, T. , Rouvinen, J.