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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9RTC

Okeania nrnc bound to pgg

PDB DOI: 10.2210/pdb9rtc/pdb

Classification: HYDROLASE
Organism(s): Okenia , Synthetic Construct

Deposited: 2025-07-02
Deposition Author(s): Burnim, A. , Dufault-Thompson, K. , Jiang, X. , Lipka, A.E. , Mortensen, S. , Sondermann, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3 Å

9rtc
Literature

Okeania nrnc bound to pgg

Burnim, A. , Dufault-Thompson, K. , Jiang, X. , Lipka, A.E. , Mortensen, S. , Sondermann, H.

Primary Citation of Related Structures: 9RTC


Proteins
Molecule Chains Sequence Length Organism Sequence
nanoRNase C A 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C N 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C B 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C C 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C D 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C E 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C F 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C G 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C H 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C I 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C J 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C K 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C L 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C M 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C O 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C P 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C Q 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C R 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C S 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C T 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C U 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C V 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C W 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C X 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C Y 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C Z 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C AA 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C DD 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH
nanoRNase C EE 208 Okenia , Synthetic Construct SMSDFQVCDRDLTEAILSDYLQADSIAVDTETMGLLPWRDRLCLVQLCDAQGKVTAIRIEKGQQEAPNLKQLMEATGIVKIFHFARFDVAMLQHHLDIKVSPIFCTKIASKLARTYTGKHGLKDLVMELEKVELDKSAQSSDWGNAENLTEEQLSYAANDVRYLLSVKEKLIKMLKREERWELAQQCFEFLPVFVGLDLLQYKDIFEH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*GP*G)-3') bb 2 NA GG
RNA (5'-R(P*GP*G)-3') cc 2 NA GG
RNA (5'-R(P*GP*G)-3') ff 2 NA GG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-07-02
Deposition Author(s): Burnim, A. , Dufault-Thompson, K. , Jiang, X. , Lipka, A.E. , Mortensen, S. , Sondermann, H.