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FASTA Sequence PDB Format mmCIF Format
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9RDC

Crystal structure of phytophthora infestans effector avrcap1b in complex with the enth domain of nicotiana benthamiana nbtol9a protein

PDB DOI: 10.2210/pdb9rdc/pdb

Classification: PROTEIN BINDING
Organism(s): Nicotiana Benthamiana , Phytophthora Infestans

Deposited: 2025-06-02
Deposition Author(s): Contreras, M.P. , Kamoun, S. , Lawson, D.M. , Madhuprakash, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4.1 Å

9rdc
Literature

Crystal structure of phytophthora infestans effector avrcap1b in complex with the enth domain of nicotiana benthamiana nbtol9a protein

Contreras, M.P. , Kamoun, S. , Lawson, D.M. , Madhuprakash, J.

Primary Citation of Related Structures: 9RDC


Proteins
Molecule Chains Sequence Length Organism Sequence
RxLR effector protein PITG_16705 A 619 Nicotiana Benthamiana , Phytophthora Infestans GPAPSIVENIKALVKSSAVTPAKLQQWLDERLPAGLVFKNMNLDEPNIFSLLHEPNFAKWVQYADDLSAKSSHKESSVISTLTSLHGDKVVYDTIQAAKLYPQLSELALKLEKDQIRFWIATRKDPSVVFEALNLNWAGISIFPKPEFSAWLKYVDDVNARHPKEAPLSIIPTLKQRFSRGDEAGTDVLLKLIANGKATTEAKTVANKVESALFDFWLNSRETPDKVMDAFKYGTTTQAFLGSPRWKEWERYLSAYNARYPEKKATAIETLTRKYGDAQLLDTLIGASSKGETKTLAAKLQAQQFDRWMNLKESPLDVYNRLRSSYGDTAFFNEPQLNVWVSYMNVFVDKNPSKVDKMFLELGDTFGDMRLFRVLGEAKKFPNLESTATKLQMEKASTLFASGKSPEGIFKVLALDNVGDDILSNTLFHKWLAYLQKFNKEHPNNQESWFDMLRISYQPFGVERIIETGRKNPLTRLMAEKVENAYHNYWLDIKMEPKTAFRSLHLDESGEKLLADPKFNTWVQYLKTFNDRYPNEKTTVIDGLRDNSHDIALLRMFSAAKNDPSTEKLATDLQSALILKWQDAKKTPEELKRVFVGVPAADEMLDRYIKLLAVASSTP
RxLR effector protein PITG_16705 B 619 Nicotiana Benthamiana , Phytophthora Infestans GPAPSIVENIKALVKSSAVTPAKLQQWLDERLPAGLVFKNMNLDEPNIFSLLHEPNFAKWVQYADDLSAKSSHKESSVISTLTSLHGDKVVYDTIQAAKLYPQLSELALKLEKDQIRFWIATRKDPSVVFEALNLNWAGISIFPKPEFSAWLKYVDDVNARHPKEAPLSIIPTLKQRFSRGDEAGTDVLLKLIANGKATTEAKTVANKVESALFDFWLNSRETPDKVMDAFKYGTTTQAFLGSPRWKEWERYLSAYNARYPEKKATAIETLTRKYGDAQLLDTLIGASSKGETKTLAAKLQAQQFDRWMNLKESPLDVYNRLRSSYGDTAFFNEPQLNVWVSYMNVFVDKNPSKVDKMFLELGDTFGDMRLFRVLGEAKKFPNLESTATKLQMEKASTLFASGKSPEGIFKVLALDNVGDDILSNTLFHKWLAYLQKFNKEHPNNQESWFDMLRISYQPFGVERIIETGRKNPLTRLMAEKVENAYHNYWLDIKMEPKTAFRSLHLDESGEKLLADPKFNTWVQYLKTFNDRYPNEKTTVIDGLRDNSHDIALLRMFSAAKNDPSTEKLATDLQSALILKWQDAKKTPEELKRVFVGVPAADEMLDRYIKLLAVASSTP
Target of myb protein 1 C 150 Nicotiana Benthamiana , Phytophthora Infestans GPMVNSMVERATSDMLIGPDWAMNIEICDICNHDPAQAKDVVKGIKRRLGSKNPKVQLLALTLLETIVKNCGDIVHMHVAEKDLLHEMVKIVKKKQPDLHVKEKVLILIDTWQEAFGGPRARYPQFYGAYQELLRIGAVFPQRSERSAPV
Target of myb protein 1 D 150 Nicotiana Benthamiana , Phytophthora Infestans GPMVNSMVERATSDMLIGPDWAMNIEICDICNHDPAQAKDVVKGIKRRLGSKNPKVQLLALTLLETIVKNCGDIVHMHVAEKDLLHEMVKIVKKKQPDLHVKEKVLILIDTWQEAFGGPRARYPQFYGAYQELLRIGAVFPQRSERSAPV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-06-02
Deposition Author(s): Contreras, M.P. , Kamoun, S. , Lawson, D.M. , Madhuprakash, J.