PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9R6R

Local refinement of the n-terminal domain (ntd) from the porcine hemagglutinating encephalomyelitis virus (phev) spike in the open conformation bound to 9-o-ac-sia

PDB DOI: 10.2210/pdb9r6r/pdb

Classification: VIRAL PROTEIN
Organism(s): Porcine Hemagglutinating Encephalomyelitis Virus

Deposited: 2025-05-13
Deposition Author(s): Fernandez, I. , Rey, F.A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

9r6r
Literature

Local refinement of the n-terminal domain (ntd) from the porcine hemagglutinating encephalomyelitis virus (phev) spike in the open conformation bound to 9-o-ac-sia

Fernandez, I. , Rey, F.A.

Primary Citation of Related Structures: 9R6R


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein A 1333 Porcine Hemagglutinating Encephalomyelitis Virus VLGDLKCNTSSINDVDTGVPSISSEVVDVTNGLGTFYVLDRVYLNTTLLLNGYYPISGATFRNMALKGTRLLSTLWFKPPFLSPFNDGIFAKVKNSRFFKDGVIYSEFPAITIGSTFVNTSYSIVVEPHTLLINGNLQGLLQISVCQYTMCEYPHTICHPNLGNQRIELWHYDTDVVSCLYRRNFTYDVNADYLYFHFYQEGGTFYAYFTDTGFVTKFLFKLYLGTVLSHYYVMPLTCDSALSLEYWVTPLTTRQFLLAFDQDGVLYHAVDCASDFMSEIMCKTSSITPPTGVYELNGYTVQPVATVYRRIPDLPNCDIEAWLNSKTVSSPLNWERKIFSNCNFNMGRLMSFIQADSFGCNNIDASRLYGMCFGSITIDKFAIPNSRKVDLQVGKSGYLQSFNYKIDTAVSSCQLYYSLPAANVSVTHYNPSSWNRRYGFNNQSFGSRGLHDAVYSQQCFNTPNTYCPCRTSQCIGGAGTGTCPVGTTVRKCFAAVTNATKCTCWCQPDPSTYKGVNAWTCPQSKVSIQPGQHCPGLGLVEDDCSGNPCTCKPQAFIGWSSETCLQNGRCNIFANFILNDVNSGTTCSTDLQQGNTNITTDVCVNYDLYGITGQGILIEVNATYYNSWQNLLYDSSGNLYGFRDYLSNRTFLIRSCYSGRVSAVFHANSSEPALMFRNLKCSHVFNNTILRQIQLVNYFDSYLGCVVNAYNNTASAVSTCDLTVGSGYCVDYVTALRSRRSFTTGYRFTNFEPFAVNLVNDSIEPVGGLYEIQIPSEFTIGNLEEFIQTSSPKVTIDCATFVCGDYAACRQQLAEYGSFCENINAILIEVNELLDTTQLQVANSLMNGVTLSTKIKDGINFNVDDINFSPVLGCLGSECNRASTRSAIEDLLFDKVKLSDVGFVQAYNNCTGGAEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATAASLFPPWTAAAGVPFYLNVQYRINGLGVTMDVLSQNQKLIASAFNNALDAIQEGFDATNSALVKIQSVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAKAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLYFIHFSYVPTKYVTAKVSPGLCIAGDIGISPKSGYFINVNNSWMFTGSGYYYPEPITQNNVVMMSTCAVNYTKAPDLMLNTSTPNLPDFKEELYQWFKNQSSVAPDLSLDYINVTFLDLQDEMNRLQEAIKVLNGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGSLVPRGSHHHHHHHHSAWSHPQFEKGTGGLNDIFEAQKIEWHE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-05-13
Deposition Author(s): Fernandez, I. , Rey, F.A.