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9QV6

Asgard hhob hypernucleosome in the closed state

PDB DOI: 10.2210/pdb9qv6/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct

Deposited: 2025-04-11
Deposition Author(s): Dodonova, S.O. , Ranawat, H.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.6 Å

9qv6
Literature

Asgard hhob hypernucleosome in the closed state

Dodonova, S.O. , Ranawat, H.M.

Primary Citation of Related Structures: 9QV6


Proteins
Molecule Chains Sequence Length Organism Sequence
Archaeal histone A A 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A B 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A C 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A D 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A E 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A F 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A G 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A H 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A I 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A J 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A K 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A L 71 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct SNAMAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (180-MER) x 180 NA CTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGTCTGGAGAATCCCGGTGCCGAGGCCGCTCAATTG
DNA (180-MER) y 180 NA CAATTGAGCGGCCTCGGCACCGGGATTCTCCAGACAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCAG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-04-11
Deposition Author(s): Dodonova, S.O. , Ranawat, H.M.