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9QV5

Asgard archaeal hhob nucleosome in the closed conformation

PDB DOI: 10.2210/pdb9qv5/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct

Deposited: 2025-04-11
Deposition Author(s): Dodonova, S.O. , Ranawat, H.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

9qv5
Literature

Asgard archaeal hhob nucleosome in the closed conformation

Dodonova, S.O. , Ranawat, H.M.

Primary Citation of Related Structures: 9QV5


Proteins
Molecule Chains Sequence Length Organism Sequence
Archaeal histone A A 68 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct MAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A B 68 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct MAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A C 68 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct MAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A D 68 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct MAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A E 68 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct MAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A F 68 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct MAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A G 68 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct MAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK
Archaeal histone A H 68 Candidatus Heimdallarchaeota Archaeon Lc_3 , Synthetic Construct MAGNFANARVEKLIRQAGAQRVSADAVDKMNEILTDWGKNIAKYAVEIARHSGRKTVKENDIKLAAQK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (120-MER) part of a full 147 bp Widom601 DNA x 120 NA GTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGA
DNA (120-MER) part of a full 147 bp Widom601 DNA y 120 NA TCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCAC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-04-11
Deposition Author(s): Dodonova, S.O. , Ranawat, H.M.