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9QTQ
Structure of the energy converting methyltransferase (mtr) of methanosarcina mazei in complex with a novel protein binder
PDB DOI: 10.2210/pdb9qtq/pdb
Classification: MEMBRANE PROTEIN Organism(s): Methanosarcina Mazei Go1
Deposited: 2025-04-09 Deposition Author(s): Bohn, S. , Herdering, E. , Kumar, A. , Pascoa, T.C. , Reif-Trauttmansdorff, T. , Schmitz, R.A. , Schuller, J.M. , Zimmer, E.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.1 Å
Structure of the energy converting methyltransferase (mtr) of methanosarcina mazei in complex with a novel protein binder
Bohn, S. , Herdering, E. , Kumar, A. , Pascoa, T.C. , Reif-Trauttmansdorff, T. , Schmitz, R.A. , Schuller, J.M. , Zimmer, E.
Primary Citation of Related Structures: 9QTQ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Tetrahydromethanopterin S-methyltransferase subunit A | A | 240 | Methanosarcina Mazei Go1 | MADKREPAPGWPILKGEYEVGDVKNSVLVITCGSHLPGKPILDAGAACTGSCKTENLGIEKVVAHIISNPNIRYLLVTGSEVKGHITGQSMMSLHANGVKENRIAGALGAIPYVENLNAAAVARFQEQVQVVNLLDTEDMGAITSKVRELASKDPGAFDADPLVVEISEEGEEEEEGGVVRPVSGEIAVLRSRLKAIEARMMDIGNLNKFHSGVHAGKVEGAMIGLTITISLLGLLLLGR |
| Tetrahydromethanopterin S-methyltransferase subunit A | B | 240 | Methanosarcina Mazei Go1 | MADKREPAPGWPILKGEYEVGDVKNSVLVITCGSHLPGKPILDAGAACTGSCKTENLGIEKVVAHIISNPNIRYLLVTGSEVKGHITGQSMMSLHANGVKENRIAGALGAIPYVENLNAAAVARFQEQVQVVNLLDTEDMGAITSKVRELASKDPGAFDADPLVVEISEEGEEEEEGGVVRPVSGEIAVLRSRLKAIEARMMDIGNLNKFHSGVHAGKVEGAMIGLTITISLLGLLLLGR |
| Tetrahydromethanopterin S-methyltransferase subunit A | C | 240 | Methanosarcina Mazei Go1 | MADKREPAPGWPILKGEYEVGDVKNSVLVITCGSHLPGKPILDAGAACTGSCKTENLGIEKVVAHIISNPNIRYLLVTGSEVKGHITGQSMMSLHANGVKENRIAGALGAIPYVENLNAAAVARFQEQVQVVNLLDTEDMGAITSKVRELASKDPGAFDADPLVVEISEEGEEEEEGGVVRPVSGEIAVLRSRLKAIEARMMDIGNLNKFHSGVHAGKVEGAMIGLTITISLLGLLLLGR |
| Tetrahydromethanopterin S-methyltransferase subunit B | D | 108 | Methanosarcina Mazei Go1 | MSIVRIAPEINLVMDTESGTVTQERKDSIQYSMEPVFERVDKLDAIADDLVNSLSPSKPLLNTWPGRENTSYIAGIYSNSFYGIIVGLAFSGLLALIIYITRLMGGVV |
| Tetrahydromethanopterin S-methyltransferase subunit B | E | 108 | Methanosarcina Mazei Go1 | MSIVRIAPEINLVMDTESGTVTQERKDSIQYSMEPVFERVDKLDAIADDLVNSLSPSKPLLNTWPGRENTSYIAGIYSNSFYGIIVGLAFSGLLALIIYITRLMGGVV |
| Tetrahydromethanopterin S-methyltransferase subunit B | F | 108 | Methanosarcina Mazei Go1 | MSIVRIAPEINLVMDTESGTVTQERKDSIQYSMEPVFERVDKLDAIADDLVNSLSPSKPLLNTWPGRENTSYIAGIYSNSFYGIIVGLAFSGLLALIIYITRLMGGVV |
| Tetrahydromethanopterin S-methyltransferase subunit C | G | 267 | Methanosarcina Mazei Go1 | MSAGGAGGEAKGAYPQQTLMALGIVGGLVGIYLGHFMPPAYSFFGGIGAICATVWGADAVRRVASYGLGTGVPSIGMLALGMGILAALFGLALGGIAGPILAVVVAAIIGGVIGALANKVIGMGIPIMEQAMIEISCAGTLVILGLSVVIAGSFDYAAIIENVIANGYIALIFIIGGMGILHPFNACLGPDESQDRTLILAVEKAAIALIITGFASSLHEGLMTAGINILVGLVIWYVAFSKYYALIKRDAYAVVGTGLLPSAEELQ |
| Tetrahydromethanopterin S-methyltransferase subunit C | H | 267 | Methanosarcina Mazei Go1 | MSAGGAGGEAKGAYPQQTLMALGIVGGLVGIYLGHFMPPAYSFFGGIGAICATVWGADAVRRVASYGLGTGVPSIGMLALGMGILAALFGLALGGIAGPILAVVVAAIIGGVIGALANKVIGMGIPIMEQAMIEISCAGTLVILGLSVVIAGSFDYAAIIENVIANGYIALIFIIGGMGILHPFNACLGPDESQDRTLILAVEKAAIALIITGFASSLHEGLMTAGINILVGLVIWYVAFSKYYALIKRDAYAVVGTGLLPSAEELQ |
| Tetrahydromethanopterin S-methyltransferase subunit C | I | 267 | Methanosarcina Mazei Go1 | MSAGGAGGEAKGAYPQQTLMALGIVGGLVGIYLGHFMPPAYSFFGGIGAICATVWGADAVRRVASYGLGTGVPSIGMLALGMGILAALFGLALGGIAGPILAVVVAAIIGGVIGALANKVIGMGIPIMEQAMIEISCAGTLVILGLSVVIAGSFDYAAIIENVIANGYIALIFIIGGMGILHPFNACLGPDESQDRTLILAVEKAAIALIITGFASSLHEGLMTAGINILVGLVIWYVAFSKYYALIKRDAYAVVGTGLLPSAEELQ |
| Tetrahydromethanopterin S-methyltransferase subunit D | J | 250 | Methanosarcina Mazei Go1 | MIDAILGNILWMVFIIIGGVLISWGVHFVPVGGAPAAMAQATGVGTGTVQLATGAGLTGLVSAGFMMNVTDNFPLIVASGAVGAMIMIAVTMIVGTWIYVYGVGCVPSSAKVKVDPITKYRQDLYVSQGTEGHGIPTVSFVSGVIGAALGGIGGSLIYYSLIEVGVSVGLERVGVTSAVTGNSLVAVAAIFAIGIFLVNAVIPSYNIGGTIEGFHDPKFKKWPKAVISSVVASILCAIVAVIAIAQLGGI |
| Tetrahydromethanopterin S-methyltransferase subunit D | K | 250 | Methanosarcina Mazei Go1 | MIDAILGNILWMVFIIIGGVLISWGVHFVPVGGAPAAMAQATGVGTGTVQLATGAGLTGLVSAGFMMNVTDNFPLIVASGAVGAMIMIAVTMIVGTWIYVYGVGCVPSSAKVKVDPITKYRQDLYVSQGTEGHGIPTVSFVSGVIGAALGGIGGSLIYYSLIEVGVSVGLERVGVTSAVTGNSLVAVAAIFAIGIFLVNAVIPSYNIGGTIEGFHDPKFKKWPKAVISSVVASILCAIVAVIAIAQLGGI |
| Tetrahydromethanopterin S-methyltransferase subunit D | L | 250 | Methanosarcina Mazei Go1 | MIDAILGNILWMVFIIIGGVLISWGVHFVPVGGAPAAMAQATGVGTGTVQLATGAGLTGLVSAGFMMNVTDNFPLIVASGAVGAMIMIAVTMIVGTWIYVYGVGCVPSSAKVKVDPITKYRQDLYVSQGTEGHGIPTVSFVSGVIGAALGGIGGSLIYYSLIEVGVSVGLERVGVTSAVTGNSLVAVAAIFAIGIFLVNAVIPSYNIGGTIEGFHDPKFKKWPKAVISSVVASILCAIVAVIAIAQLGGI |
| Tetrahydromethanopterin S-methyltransferase subunit E | M | 334 | Methanosarcina Mazei Go1 | MEPLIGMGVLALIGVAATIAGASEDLESDIGSQSNPNSQVQLAPQMMFPHRIFNKAISGEPPSNALMCSIGAAIATVLISEFTVSPLFALVFGSVIAASVHATFAVTATMGRCASQSRFKQPIYLDMIRSHTPAIMGYAFITTFCVLIVSYLMTVVLGHPFPLTMLAFIWGITIGAIGSSTGDVHYGAEREFQQFEFGSGLNASNSGNIVRYAESGLRNGFDNSWFCSKFGGPTTGIAFGMTVFLGSWITTIFDPAQGLSMGWLSVIAGVIIVLILIIWNWKIEVQARKAYGPYKEDKAEEASASAWSHPQFEKGGGSGGGSGGSAWSHPQFEK |
| Tetrahydromethanopterin S-methyltransferase subunit E | N | 334 | Methanosarcina Mazei Go1 | MEPLIGMGVLALIGVAATIAGASEDLESDIGSQSNPNSQVQLAPQMMFPHRIFNKAISGEPPSNALMCSIGAAIATVLISEFTVSPLFALVFGSVIAASVHATFAVTATMGRCASQSRFKQPIYLDMIRSHTPAIMGYAFITTFCVLIVSYLMTVVLGHPFPLTMLAFIWGITIGAIGSSTGDVHYGAEREFQQFEFGSGLNASNSGNIVRYAESGLRNGFDNSWFCSKFGGPTTGIAFGMTVFLGSWITTIFDPAQGLSMGWLSVIAGVIIVLILIIWNWKIEVQARKAYGPYKEDKAEEASASAWSHPQFEKGGGSGGGSGGSAWSHPQFEK |
| Tetrahydromethanopterin S-methyltransferase subunit E | O | 334 | Methanosarcina Mazei Go1 | MEPLIGMGVLALIGVAATIAGASEDLESDIGSQSNPNSQVQLAPQMMFPHRIFNKAISGEPPSNALMCSIGAAIATVLISEFTVSPLFALVFGSVIAASVHATFAVTATMGRCASQSRFKQPIYLDMIRSHTPAIMGYAFITTFCVLIVSYLMTVVLGHPFPLTMLAFIWGITIGAIGSSTGDVHYGAEREFQQFEFGSGLNASNSGNIVRYAESGLRNGFDNSWFCSKFGGPTTGIAFGMTVFLGSWITTIFDPAQGLSMGWLSVIAGVIIVLILIIWNWKIEVQARKAYGPYKEDKAEEASASAWSHPQFEKGGGSGGGSGGSAWSHPQFEK |
| Tetrahydromethanopterin S-methyltransferase subunit F | P | 72 | Methanosarcina Mazei Go1 | MAEEHEKGVPMVLAPQMGAIDATVESIRYRAQLIARNQKLDSGVAATGIIGFAAGFLFSLLMVIVLPVAVGL |
| Tetrahydromethanopterin S-methyltransferase subunit F | Q | 72 | Methanosarcina Mazei Go1 | MAEEHEKGVPMVLAPQMGAIDATVESIRYRAQLIARNQKLDSGVAATGIIGFAAGFLFSLLMVIVLPVAVGL |
| Tetrahydromethanopterin S-methyltransferase subunit F | R | 72 | Methanosarcina Mazei Go1 | MAEEHEKGVPMVLAPQMGAIDATVESIRYRAQLIARNQKLDSGVAATGIIGFAAGFLFSLLMVIVLPVAVGL |
| Tetrahydromethanopterin S-methyltransferase subunit G | S | 72 | Methanosarcina Mazei Go1 | MDGKAPAAFVEPGEFNEVMKRLDQIDEKVEFVNSEVAQRIGKKVGRDIGILYGGVIGLLLFLIYVQISSMFM |
| Tetrahydromethanopterin S-methyltransferase subunit G | T | 72 | Methanosarcina Mazei Go1 | MDGKAPAAFVEPGEFNEVMKRLDQIDEKVEFVNSEVAQRIGKKVGRDIGILYGGVIGLLLFLIYVQISSMFM |
| Tetrahydromethanopterin S-methyltransferase subunit G | U | 72 | Methanosarcina Mazei Go1 | MDGKAPAAFVEPGEFNEVMKRLDQIDEKVEFVNSEVAQRIGKKVGRDIGILYGGVIGLLLFLIYVQISSMFM |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-04-09 Deposition Author(s): Bohn, S. , Herdering, E. , Kumar, A. , Pascoa, T.C. , Reif-Trauttmansdorff, T. , Schmitz, R.A. , Schuller, J.M. , Zimmer, E.