9QKY
The structure of the dna-binding domain of nuclear factor 1 x bound to nfi consensus dna sequence
PDB DOI: 10.2210/pdb9qky/pdb
Classification: TRANSCRIPTION Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2025-03-20 Deposition Author(s): Bonnet, D.M.V. , Chaves-Sanjuan, A. , Gourlay, L.J. , Nardini, M. , Tiberi, M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.86 Å
The structure of the dna-binding domain of nuclear factor 1 x bound to nfi consensus dna sequence
Bonnet, D.M.V. , Chaves-Sanjuan, A. , Gourlay, L.J. , Nardini, M. , Tiberi, M.
Primary Citation of Related Structures: 9QKY
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Nuclear factor 1 X-type | A | 182 | Mus Musculus , Synthetic Construct | HMPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDS |
| Nuclear factor 1 X-type | B | 182 | Mus Musculus , Synthetic Construct | HMPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDS |
| Nuclear factor 1 X-type | E | 182 | Mus Musculus , Synthetic Construct | HMPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDS |
| Nuclear factor 1 X-type | F | 182 | Mus Musculus , Synthetic Construct | HMPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDS |
| Nuclear factor 1 X-type | I | 182 | Mus Musculus , Synthetic Construct | HMPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDS |
| Nuclear factor 1 X-type | J | 182 | Mus Musculus , Synthetic Construct | HMPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDS |
| Nuclear factor 1 X-type | M | 182 | Mus Musculus , Synthetic Construct | HMPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDS |
| Nuclear factor 1 X-type | N | 182 | Mus Musculus , Synthetic Construct | HMPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDS |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (31-MER) | c | 31 | NA | GGGTCTCTTTGGCAGGCAGCCAACCAGCAAA |
| DNA (31-MER) | g | 31 | NA | GGGTCTCTTTGGCAGGCAGCCAACCAGCAAA |
| DNA (31-MER) | k | 31 | NA | GGGTCTCTTTGGCAGGCAGCCAACCAGCAAA |
| DNA (31-MER) | o | 31 | NA | GGGTCTCTTTGGCAGGCAGCCAACCAGCAAA |
| DNA (31-MER) | d | 31 | NA | TTTGCTGGTTGGCTGCCTGCCAAAGAGACCC |
| DNA (31-MER) | h | 31 | NA | TTTGCTGGTTGGCTGCCTGCCAAAGAGACCC |
| DNA (31-MER) | l | 31 | NA | TTTGCTGGTTGGCTGCCTGCCAAAGAGACCC |
| DNA (31-MER) | p | 31 | NA | TTTGCTGGTTGGCTGCCTGCCAAAGAGACCC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-03-20 Deposition Author(s): Bonnet, D.M.V. , Chaves-Sanjuan, A. , Gourlay, L.J. , Nardini, M. , Tiberi, M.