9PZB
Hcmv trimer in complex with e4k, e11k, a9k, e9l, e8k, b1k, e7k, f12l and e10l fabs
PDB DOI: 10.2210/pdb9pzb/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Human Betaherpesvirus 5
Deposited: 2025-08-09 Deposition Author(s): Goldsmith, J.A. , Mclellan, J.S.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.2 Å
Hcmv trimer in complex with e4k, e11k, a9k, e9l, e8k, b1k, e7k, f12l and e10l fabs
Goldsmith, J.A. , Mclellan, J.S.
Primary Citation of Related Structures: 9PZB
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Envelope glycoprotein H | A | 743 | Homo Sapiens , Human Betaherpesvirus 5 | MRPGLPPYLTVFTVYLLSHLPSQRYGADAASEALDPHAFHLLLNTYGRPIRFLRENTTQCTYNSSLRNSTVVRENAISFNFFQSYNQYYVFHMPRCLFAGPLAEQFLNQVDLTETLERYQQRLNTYALVSKDLASYRSFSQQLKAQDSLGQQPTTVPPPIDLSIPHVWMPPQTTPHDWKGSHTTSGLHRPHFNQTCILFDGHDLLFSTVTPCLHQGFYLMDELRYVKITLTEDFFVVTVSIDDDTPMLLIFGHLPRVLFKAPYQRDNFILRQTEKHELLVLVKKAQLNRHSYLKDSDFLDAALDFNYLDLSALLRNSFHRYAVDVLKSGRCQMLDRRTVEMAFAYALALFAAARQEEAGTEISIPRALDRQAALLQIQEFMITCLSQTPPRTTLLLYPTAVDLAKRALWTPDQITDITSLVRLVYILSKQNQQHLIPQWALRQIADFALQLHKTHLASFLSAFARQELYLMGSLVHSMLVHTTERREIFIVETGLCSLAELSHFTQLLAHPHHEYLSDLYTPCSSSGRRDHSLERLTRLFPDATVPATVPAALSILSTMQPSTLETFPDLFCLPLGESFSALTVSEHVSYVVTNQYLIKGISYPVSTTVVGQSLIITQTDSQTKCELTRNMHTTHSITAALNISLENCAFCQSALLEYDDTQGVINIMYMHDSDDVLFALDPYNEVVVSSPRTHYLMLLKNGTVLEVTDVVVDATDSRLLMMSVYALSAIIGIYLLYRMLKTC |
| F12L Fab light chain | K | 115 | Homo Sapiens , Human Betaherpesvirus 5 | QAVLTQPSSLSTSPGASASLTCTLRSGINVHTYRIYWYQQKPGSPPQYLLRYKSDSDNHQGIGVPTRFSGSKDASANAGILLISGLQSEDEADYYCMIWHNSAVVFGGGTRLTVL |
| E9L Fab light chain | L | 107 | Homo Sapiens , Human Betaherpesvirus 5 | SYELTQPPSVSVSPGQAATITCSGDKLGNKYVCWYQQKPGQSPALVIYQDTKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSNTAYVFGTGTKVTVL |
| E9L Fab heavy chaun | M | 118 | Homo Sapiens , Human Betaherpesvirus 5 | QVQLQESGPGLVRPSETLSLTCNVLGGSISTYHWSWIRQPAGKGLEWIGRMDSSGNTNYNPSLKSRVTMSVDTSKNQFSLKLRSVIAADMATYYCARATRNGWYVLDSWGQGILVTVS |
| B1K Fab heavy chain | N | 117 | Homo Sapiens , Human Betaherpesvirus 5 | QGQLVQSGAEVKRPGASVKVSCKASGYTFNTFGITWVRQAPGQGLEWVGRINTYNGNTNYGQKFQGRITMTRDTSTGTAYMELRSLRSDDTAVYYCARDLTWGYCDYWGQGTLVTVS |
| B1K Fab light chain | O | 107 | Homo Sapiens , Human Betaherpesvirus 5 | DIQMTQSPSTLSASVGDRVTITCRASQSIGTSLAWYQQKPGKAPKLLLYMASTLEAGVPSRFSGGGSGTDFALTISSLQPDDFATYYCQHFDTYPYTFGRGTKVDIK |
| E4K Fab heavy chain | P | 121 | Homo Sapiens , Human Betaherpesvirus 5 | QVHLVQSGAEVKKPGASVKVSCKASGYTFSNYGISWVRQAPGQGLEWMGWISGYNGNTNYAQKFKDRVIMSTDPFTSTVYLEVRSLRSDDTAVYYCAREGSRPYYYRGMDVWGQGTTVTVS |
| E4K Fab light chain | Q | 108 | Homo Sapiens , Human Betaherpesvirus 5 | EIVLTQFPATLSLSPGERATLFCRASQSISSYVAWYQHKPGQAPRLLIYDTVSRATGVPARFSGAGSGTDFTLSISSLESGDFGVYYCQQRGMSLPWTFGQGTKVEIK |
| Envelope glycoprotein L | B | 268 | Homo Sapiens , Human Betaherpesvirus 5 | MSVPTQVLGLLLLWLTDARCVAVSVAPTAAEKVPAECPELTRRCLLGEVFQGDKYESWLRPLVNVTRRDGPLSQLIRYRPVTPEAANSVLLDDAFLDTLALLYNNPDQLRALLTLLSSDTAPRWMTVMRGYSECGDGSPAVYTCVDDLCRGYDLTRLSYGRSIFTEHVLGFELVPPSLFNVVVAIRNEATRTNRAVRLPVSTAAAPEGITLFYGLYNAVKEFCLRHQLDPPLLRHLDKYYAGLPPELKQTRVNLPAHSRYGPQAVDAR |
| E10L Fab light chain | D | 111 | Homo Sapiens , Human Betaherpesvirus 5 | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNHVSWYQERPGKAPQLIIYDVSYRPAGVSSRFSGSKSGNTASLIISWLQAEDEADYYCSSHTNNYGLVVFGGGTKVTVL |
| E10L Fab heavy chain | E | 122 | Homo Sapiens , Human Betaherpesvirus 5 | QVQLVQSGAEVKKPGASVKVSCKASGYTFSNYYMHWVRQAPGEGLEWMGRVNPSGGASTYAQKLQGRVTMTRDTSTSTFYMHLSSLKSDDTAVYYCARGGGLRFGDLFYFQHWGQGTQVTVS |
| A9K Fab heavy chain | F | 116 | Homo Sapiens , Human Betaherpesvirus 5 | QVQLVESGGGVVQPGRSLRLSCAASGFSFSAYAMHWVRQAPGRGLEWVAVIWFDGSKKVYADSVKGRFTISRDNSKNTLHLQMDSLRAEDTAVYYCSREEYRSFNYWGQGTLVTVS |
| A9K Fab light chain | G | 107 | Homo Sapiens , Human Betaherpesvirus 5 | DIQMTQSPSSLSASVGDRVTIICRASRSIGTNLNWYQQRVGKAPNLLIYDASRLHSGVPSRFSGSGTGTAFTLTISSLQPEDFATYYCQQSYSTPRTFGPGTKVDSK |
| E8K Fab heavy chaun | H | 126 | Homo Sapiens , Human Betaherpesvirus 5 | QVQLMQSPGEVKKPGASVKVSCRSFGYSFTFYGMNWLRQAPGQGLEWMGWISTSNGGTNYAQKFQDRLTMTMDTSASTTYMELRSLRSDDTAVYYCARDFPRLYNYDNGNYRWFGSWGQGTLVTVS |
| E8K Fab light chain | I | 113 | Homo Sapiens , Human Betaherpesvirus 5 | DIVMTQSPDSLGVSLGERATISCKSSQSVFFSANQKNYLAWYQQKLGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQVEDVAVYYCQQYYSTPFTFGPGTKVDLK |
| F12L Fab heavy chain | J | 118 | Homo Sapiens , Human Betaherpesvirus 5 | QVQLQESGPGLVKPSQTLSLTCSVSGGSIGGDKYYWTWIRQSPGKGLDWIGYTYFGGTTYYNPSLKSRITISEDMSKNQFSLKLNSVTAADTAVYYCVAATTTVRFDYWGQGMLVTVS |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-08-09 Deposition Author(s): Goldsmith, J.A. , Mclellan, J.S.