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9PIB

Crystal structure of the a/puerto rico/8/1934 (h1n1) influenza virus hemagglutinin in complex with fusion inhibitor clips peptide cp121132 (cp-s1)

PDB DOI: 10.2210/pdb9pib/pdb

Classification: VIRAL PROTEIN
Organism(s): Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct

Deposited: 2025-07-10
Deposition Author(s): Kadam, R.U. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.35 Å

9pib
Literature

Crystal structure of the a/puerto rico/8/1934 (h1n1) influenza virus hemagglutinin in complex with fusion inhibitor clips peptide cp121132 (cp-s1)

Kadam, R.U. , Wilson, I.A.

Primary Citation of Related Structures: 9PIB


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin A 326 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPLQLGKCNIAGWLLGNPECDPLLPVRSWSYIVETPNSENGICYPGDFIDYEELREQLSSVSSFERFEIFPKESSWPNHNTNGVTAACSHEGKSSFYRNLLWLTEKEGSYPKLKNSYVNKKGKEVLVLWGIHHPPNSKEQQNLYQNENAYVSVVTSNYNRRFTPEIAERPKVRDQAGRMNYYWTLLKPGDTIIFEANGNLIAPMYAFALSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin C 326 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPLQLGKCNIAGWLLGNPECDPLLPVRSWSYIVETPNSENGICYPGDFIDYEELREQLSSVSSFERFEIFPKESSWPNHNTNGVTAACSHEGKSSFYRNLLWLTEKEGSYPKLKNSYVNKKGKEVLVLWGIHHPPNSKEQQNLYQNENAYVSVVTSNYNRRFTPEIAERPKVRDQAGRMNYYWTLLKPGDTIIFEANGNLIAPMYAFALSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin E 326 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPLQLGKCNIAGWLLGNPECDPLLPVRSWSYIVETPNSENGICYPGDFIDYEELREQLSSVSSFERFEIFPKESSWPNHNTNGVTAACSHEGKSSFYRNLLWLTEKEGSYPKLKNSYVNKKGKEVLVLWGIHHPPNSKEQQNLYQNENAYVSVVTSNYNRRFTPEIAERPKVRDQAGRMNYYWTLLKPGDTIIFEANGNLIAPMYAFALSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin G 326 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPLQLGKCNIAGWLLGNPECDPLLPVRSWSYIVETPNSENGICYPGDFIDYEELREQLSSVSSFERFEIFPKESSWPNHNTNGVTAACSHEGKSSFYRNLLWLTEKEGSYPKLKNSYVNKKGKEVLVLWGIHHPPNSKEQQNLYQNENAYVSVVTSNYNRRFTPEIAERPKVRDQAGRMNYYWTLLKPGDTIIFEANGNLIAPMYAFALSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin HA2 chain B 176 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKEFNKLEKRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNREKVDGV
Hemagglutinin HA2 chain D 176 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKEFNKLEKRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNREKVDGV
Hemagglutinin HA2 chain F 176 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKEFNKLEKRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNREKVDGV
Hemagglutinin HA2 chain H 176 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKEFNKLEKRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNREKVDGV
CLIPS peptide CP121132 N 13 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct XRCLCYFEWLSCX
CLIPS peptide CP121132 O 13 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct XRCLCYFEWLSCX
CLIPS peptide CP121132 P 13 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct XRCLCYFEWLSCX
CLIPS peptide CP121132 Q 13 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct XRCLCYFEWLSCX
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-07-10
Deposition Author(s): Kadam, R.U. , Wilson, I.A.