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FASTA Sequence PDB Format mmCIF Format
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9OP8

Herpes simplex virus type 1 (hsv-1) d-capsid pul6 portal protein, dodecameric complex

PDB DOI: 10.2210/pdb9op8/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Alphaherpesvirus 1 Strain Kos

Deposited: 2025-05-17
Deposition Author(s): Crofut, E.H. , Jih, J. , Kashyap, S. , Liu, Y.-T. , Stevens, A. , Zhou, Z.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

9op8
Literature

Herpes simplex virus type 1 (hsv-1) d-capsid pul6 portal protein, dodecameric complex

Crofut, E.H. , Jih, J. , Kashyap, S. , Liu, Y.-T. , Stevens, A. , Zhou, Z.H.

Primary Citation of Related Structures: 9OP8


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid portal protein A 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein B 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein C 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein D 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein E 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein F 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein G 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein H 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein I 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein J 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein K 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Capsid portal protein L 676 Human Alphaherpesvirus 1 Strain Kos MTAPRSWAPTTRARGDTEALCSPEDGWVKVHPTPGTMLFREILHGQLGYTEGQGVYNVVRSSEATTRQLQAAIFHALLNATTYRDLEADWLGHVAARGLQPQRLVRRYRNAREADIAGVAERVFDTWRNTLRTTLLDFAHGLVACFAPGGPSGPSSFPKYIDWLTCLGLVPILRKRQEGGVTQGLRAFLKQHPLTRQLATVAEAAERAGPGFFELALAFDSTRVADYDRVYIYYNHRRGDWLVRDPISGQRGECLVLWPPLWTGDRLVFDSPVQRLFPEIVACHSLREHAHVCRLRNTASVKVLLGRKSDSERGVAGAARVVNKVLGEDDETKAGSAASRLVRLIINMKGMRHVGDINDTVRAYLDEAGGHLIDAPAVDGTLPGFGKGGNSRGSAGQDQGGRAPQLRQAFRTAVVNNINGVLEGYINNLFGTIERLRETNAGLATQLQERDRELRRATAGALERQQRAADLAAESVTGGCGSRPAGADLLRADYDIIDVSKSMDDDTYVANSFQHPYIPSYAQDLERLSRLWEHELVRCFKILCHRNNQGQETSISYSSGAIAAFVAPYFESVLRAPRVGAPITGSDVILGEEELWDAVFKKTRLQTYLTDIAALFVADVQHAALPPPPSPVGADFRPGASPRGRSRSRSPGRTAPGAPDQGGGIGHRDGRRDGRR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-05-17
Deposition Author(s): Crofut, E.H. , Jih, J. , Kashyap, S. , Liu, Y.-T. , Stevens, A. , Zhou, Z.H.