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9OMF
Cryo-em structure of neddylated pcmtd1-elobc-cul5-rbx2 (n8-crl5-pcmtd1)
PDB DOI: 10.2210/pdb9omf/pdb
Classification: PROTEIN BINDING Organism(s): Homo Sapiens , Mus Musculus
Deposited: 2025-05-13 Deposition Author(s): Clarke, S.G. , Flowers, C. , Loo, J.A. , Oroudjeva, E. , Pandey, V. , Pang, E.Z. , Rodriguez, J.A. , Sawaya, M.R. , Winters, J.B. , Wohlschlegel, W. , Zhao, B.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 9.72 Å
Cryo-em structure of neddylated pcmtd1-elobc-cul5-rbx2 (n8-crl5-pcmtd1)
Clarke, S.G. , Flowers, C. , Loo, J.A. , Oroudjeva, E. , Pandey, V. , Pang, E.Z. , Rodriguez, J.A. , Sawaya, M.R. , Winters, J.B. , Wohlschlegel, W. , Zhao, B.
Primary Citation of Related Structures: 9OMF
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Protein-L-isoaspartate O-methyltransferase domain-containing protein 1 | A | 358 | Homo Sapiens , Mus Musculus | SMGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDIKEEEEKDHNEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK |
| Cullin-5 | B | 783 | Homo Sapiens , Mus Musculus | GEFMATSNLLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHYGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENVKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYILRDESDINTFIYMA |
| RING-box protein 2 | C | 113 | Homo Sapiens , Mus Musculus | MADVEDGEEPCVLSSHSGSAGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK |
| Elongin-B | D | 118 | Homo Sapiens , Mus Musculus | MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ |
| Elongin-C | E | 96 | Homo Sapiens , Mus Musculus | MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-05-13 Deposition Author(s): Clarke, S.G. , Flowers, C. , Loo, J.A. , Oroudjeva, E. , Pandey, V. , Pang, E.Z. , Rodriguez, J.A. , Sawaya, M.R. , Winters, J.B. , Wohlschlegel, W. , Zhao, B.