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FASTA Sequence PDB Format mmCIF Format
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9OKL

Structure of the bombyx mori apo-bmccan

PDB DOI: 10.2210/pdb9okl/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Bombyx Mori , Spodoptera Frugiperda

Deposited: 2025-05-10
Deposition Author(s): Ciferri, C. , Yatskevich, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

9okl
Literature

Structure of the bombyx mori apo-bmccan

Ciferri, C. , Yatskevich, S.

Primary Citation of Related Structures: 9OKL


Proteins
Molecule Chains Sequence Length Organism Sequence
CS-1 A 108 Bombyx Mori , Spodoptera Frugiperda MSALGNLSQGNQQQDLQNELTTANQLLRLISLELEQIKNLTNPAGDFAANIKKNAELVKKLANIQQVDLTNLPPFTRKYIDLNENANQNVSYEEHNTFRNESEMDESQ
bmCENP-N N 328 Bombyx Mori , Spodoptera Frugiperda MKNSNKLKDLQMTIARMPLQQCCVTVLPEFGVKWREVFRAVRLARLPMTAASVARVLTRHIAKSLEAHELNDILARLKLKLVASQNRMWHVVNMSEQHTAGPITELIETLPEVIENNLKKGKHRFTRPEVQTNLIGDLLYISVQLVSDTKEGSTLYVATPPGESVALFSTLSMSAQIKACVDALGYRKYEDAKLHGKDIPSLLRINDRAWSGMAQNLASVPDYAPKPILTYNGIDYTNRTYDAEYIENILGPDPPLLTDLTIKTSKPFFDASMLSKNINMKITLKSENVAETLKSWVVKGALAPTSEFFHIFHNIKSNNISRNIDDTD
Centromere protein O O 325 Bombyx Mori , Spodoptera Frugiperda MKQTKITKLFQTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQKIVLTNSIDSLKRNLELMSILTGMEVQSYVVGEHCCVVYHMQHDSDNVVKHGLRIEMQAGANVVSKSSLPLGFNINAVMEEYDNIMMPECLGAIRKALVAYYDRLQQFEALKKMLNVEAQLFKLLDASHIEISFSAQSAVEEDEHLNLVLVLDYRVYDIRPKQYSFKDLDIPAGAVAALKEQCTVFKRKPLQRAFRDAFIDGVGPYQMIHQIGFKPVERKSHRRKRFKAHPYNHNNDDTFRPEDCSDQSEEGPEP
bmCENP-P P 638 Bombyx Mori , Spodoptera Frugiperda MPINKIHYDKKTLLLEKQSLLDNIVYCETRIAELLTKKCTNYIEDSDSSGSEDGFTLSIDPGPTVSQLKLLQSSLQTCLQATQELTNLQVLQSEVNVMVTEPELEGEPPVTESGAWREVTADCRIDLVPFSVQFYMHQPDRKFSAPSYRKLCVILVKAAHETELAKSVLPHLTRPSDVVEVLKSYSVAYRSRRTSLARLAEKYESSLYMEPAAEGGYLLRCANLLEVHWRLENKVSAVAPFYHRMKFDLEYMNESYVAKISEAHKQLSDPALSTDERTLLLSKIITVCLEVNGQETVEPSRLDTRQDALDGDPAPNIMAPPKEIPRKLAKKPSKSLKRSQPDTANVSAKKGKSAPDDTTENQSDNINIHNLVDNIDSKKNNFEATTKNVVTSQSTNKDKSSGNTELEKAQMIKKPIAENGGRGNKQSSNSEVNVKSVKSSAASKKIPTHKSRLAEKSSVASAEIKSTSKNVAAIKSRTEKLNLNENDKNVMNTNNKNNGNELIEKVTERNKHITPNKRENVANINVDNSRDKQKNDLQNKKIQKKILIKSHKNPSSKIKAGNNNVLSAGNTDAAKKSKIPQKVSSPVVDSIIKKNMLRISPRRLPANIKSSSETSNKQRLIKTSTSIPRLLKPTSKIK
bmCENP-T T 1016 Bombyx Mori , Spodoptera Frugiperda MPSSKIPSPARSQGSLLTPRRHRTRSTRSVGSPARSNTPSRLTAIIMQNKEPSFVLSPLPTRRSVLNDDTEVEEPQRKSWWRKLDENSRDILEVLEGNKVGETYEAVEEILNVEILSQEKKNYTSDLPDSSDSESINSIVMPQRKLFIQKENVPKKKFGQLIDNRESLANVDKTTAHEKSVTVTTKSLFQNNKRKRVFPAAALNLSPNKTAVDKTKQCIVDPPQNQPRNIFGYRPAAKRKNMFAEFIVSESEDEISEIQPKVFEYQKQFEHRRSRASNSRPIRETSPASSITTDMELDDWKYLPSSTIVESHDQNLTENHANTIVLKEHDPKKQVSTQHAQQPNDEDHEMVCENNVDQKMFQDKETDNRQQGITPYNNDRGNNTSNKDQTQKEAVEVEHSHNEFQENQQNITNKQKNAENISNVDNSGEQADIFTPQNEEIVEQENENNDFRKPENIGSQNNIDIEKHADNEKNNHVEEVDQNAETEEKIHHSNNTDISSEQNAEVIASNEEEQMNSHGNETGIEESDQNAESEASCAEEEQEETVNEECESEENNSERALEDSTVENNDETEIHERSGDQIRESDEDLEIDENMERSELGNESNASNDDEHLYLSDDNDDEPENSAGADINVNDNSPNTDNLDNNEITDRSETVEKVNLPEAILHDKKNESDLFTMQGNNTDLRKTKSIMLMSIRPSLLPPVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTALVDAKEISKMPQANSTEIPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAMKQCKQNVNIFKVPAKPLFARHSTKPVQNKNKVREMKSSMPLGDLPPELLEDMKYKPPKRYQPKNASWTTKRLYKYLEDKLEPKYDYKARVRAEKLVETIYHFTKEVKKHEVAPNDAVDVLKHEMARLDIVKTHFDFYQFFHDFMPREIRVKVVPDIVNKITIPRNGVFSEILSGHAVHA
CS-2 B 82 Bombyx Mori , Spodoptera Frugiperda MASIAPSDSESNVSGFMRYSDKDVKYLYTSIIQSMESINQDISIVETNLKNLVQQAGPLEGQLSALLQSLPKPNLNLPMETD
SFRICE_007223 C 71 Bombyx Mori , Spodoptera Frugiperda MSSASVTSSKREKQNIELAQEIDSMKAMNSSLRAYLEHLRVLKKNILAMNDNCTQLNKVNDEIIEIVNNNK
CS-4 D 81 Bombyx Mori , Spodoptera Frugiperda MNSTISDDLSREHLTFEAVKCLKNISSKTQSVTLLHKELLEINLSITAYIQESKKRLARLRLDLAHDAKNSQKVVEILSDK
bm-CENPH H 239 Bombyx Mori , Spodoptera Frugiperda MSAFKTLKEVSQNFEQELKQLSNVLFSAKIGETFEDAVSKKLQELSLFSSKLKLLRAKPVSLTPQITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSDDEEMDTNSAYYVRLRTLVSKMEMIRWLIGRLVVCRKESRNDPRRALQALKMARQVLDVDTFMSD
Centromere protein I I 661 Bombyx Mori , Spodoptera Frugiperda MCDIGEIIDYIKSLKRGFDKDLFQSKIDELGYIVDSVGLDYDDFHTLFKIWLNLSIPLTKWTSLGACLIPPDAVEEKTVDYAIQWILINYGNQNSFTKTGFLLDWLTAAMECDCIDMKALDFGYELFYSMMTYETLTPQAVKLVYTLTKPSDVTRRRVIEILDCAKKRESKKNLFRQLQILLGLFKSYKPECVPENVPAICVHTAFKKINKDLLGRFKRTQERRNRQSKEKQHLIWLNPINMARGRNKKIVPLVPNMEFFNIGSKQYDQKEPQKNYLDFSDPASVVQLAACGRAARPARLRALLCGPALLLAAAAADQHAFLSHDLRHLLDNCFLDISPYSYAEKQDLLQRLALLQSTLLQGIPVITRFLAQFLPLWNERDYFTEILQLVEWVSVDSPDHLGYIVGPLIKIYHRAQPLEQCAILKSLTQMYINLVYASTRRRQFFMAIDTPKENYDVVLPRLAAELGEMGEKALQYNPDDMRVLFSNIWSVECRSRAHLLYNIGLGPIPGLLSLSLPLLGVSAALIEKMAALLVIYKKIFTRLKSTNAISATHTEQIQILHRYSVDLSSLYTEESLRGRGNGFVFDKLHPQLVSKLYHLIPEPDTKLSVRSHVAFAAYTYVALGDVDERDADNKAWYRAFLEHEFSYLAKFFKKTVPELRM
bmCENP-K K 219 Bombyx Mori , Spodoptera Frugiperda MTSKHNAETLDALKREIKTLQNNCLNVCNIIENAPPETPSANQDEISDKCLSYIQALKTEIENPNTIITTDENLLTSQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSELHGLIYSMFPNTSALIIEFMGQLMAERLNPASSGYIQITAENYQIAELLKDTNIISTNPYNKMEVKLAY
Centromere protein L L 302 Bombyx Mori , Spodoptera Frugiperda MSSLRLDSCWEQEEDGNTSRHVTGDPIALIYNEGLWKINKVSPLYNLQYNGIKLKQYGSKILQALVSSLQMSNTAKYTVVLEELPLLKYSEEDSSGILITVRSSQEDSNTKKVAYVAILLSWGISISMENAIHLPYMLERGEQRVGTVVKTILQTAFDCNIKQFSFTQHQLLNFGFSFIDSDTSRSNDQFTLVYRSPQTEVKSKLSLSFDIGDVRLIWNGIKDETTKKADLIILAYQILQNQIFSLGYLDVTVFDLSEINLTKAEIKCNGGVKMKTPEIVNCVFTVLNEICCDLWQDLNITE
Centromere protein M M 180 Bombyx Mori , Spodoptera Frugiperda MSLLEEDAVIAPWVGPMSAKNSLTAIVLSLNVEVIEKVSEALSEVHKKSRFRWKLVVLRSFHLEEVVKQSDLTGRVAIDFVIIALDTSRLFCLEWAKKELSQVHPDLRRRRVVLVNTSGLPVNAMAITAGELINFYTENNVDLLTADISNTENTTLLAQKLLKYMEVSIGVRTGIPNINV
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-05-10
Deposition Author(s): Ciferri, C. , Yatskevich, S.