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FASTA Sequence PDB Format mmCIF Format
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9OEG

Structure of the human astrovirus va1 capsid spike bound to antibody 2a2

PDB DOI: 10.2210/pdb9oeg/pdb

Classification: VIRAL PROTEIN
Organism(s): Astrovirus Va1 , Mus Musculus

Deposited: 2025-04-28
Deposition Author(s): Balasco Serrao, V.H. , Dubois, R.M. , Dzimianski, J.V. , Ghosh, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.05 Å

9oeg
Literature

Structure of the human astrovirus va1 capsid spike bound to antibody 2a2

Balasco Serrao, V.H. , Dubois, R.M. , Dzimianski, J.V. , Ghosh, A.

Primary Citation of Related Structures: 9OEG


Proteins
Molecule Chains Sequence Length Organism Sequence
2A2 heavy chain H 224 Astrovirus Va1 , Mus Musculus DVQLVESGGGLVQPGGSRKLSCAASGFTFSYFGMHWVRQAPEKGLEWVAYISSGSNTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARAYYGNHYYAMDFWGPGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
2A2 heavy chain J 224 Astrovirus Va1 , Mus Musculus DVQLVESGGGLVQPGGSRKLSCAASGFTFSYFGMHWVRQAPEKGLEWVAYISSGSNTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARAYYGNHYYAMDFWGPGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
2A2 light chain K 215 Astrovirus Va1 , Mus Musculus DIQMTQSPASLSVSVGETVTITCRASENIYSNLAWYQQKRGKSPQLLVHAARDLATGVPSRFSGSGSGTQYSLKINSLQSEDFGTYYCQHFWETPWTFGGGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
2A2 light chain L 215 Astrovirus Va1 , Mus Musculus DIQMTQSPASLSVSVGETVTITCRASENIYSNLAWYQQKRGKSPQLLVHAARDLATGVPSRFSGSGSGTQYSLKINSLQSEDFGTYYCQHFWETPWTFGGGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Capsid polyprotein VP90 A 289 Astrovirus Va1 , Mus Musculus MGPIPPTGVPVGDFFVCGRMTTLHMGGQSGIQATTLVNGMIYRTDHPEPSTSPVSNWEFTVLENNTIVGAGMGCVWFQKSEALVWTLDGQKLSGWNTLDGVGTTQLTVAWRQHNRTIYGWANVVAWNSEEWHTNAEQPHQPILRLTYWLVKINVLSEPEDFDVVQKSPLAYLEDYTTAQSKSAIQKLNFQTFQKPEGGGTLRAQYSTTPRQGDFAVIWQIGRHNFDMSTGKGTPVESLSDYVMPQQKDAHIGMWYRALTSVGPRTDVLTLHFHLPTVEKAAAELALVPR
Capsid polyprotein VP90 B 289 Astrovirus Va1 , Mus Musculus MGPIPPTGVPVGDFFVCGRMTTLHMGGQSGIQATTLVNGMIYRTDHPEPSTSPVSNWEFTVLENNTIVGAGMGCVWFQKSEALVWTLDGQKLSGWNTLDGVGTTQLTVAWRQHNRTIYGWANVVAWNSEEWHTNAEQPHQPILRLTYWLVKINVLSEPEDFDVVQKSPLAYLEDYTTAQSKSAIQKLNFQTFQKPEGGGTLRAQYSTTPRQGDFAVIWQIGRHNFDMSTGKGTPVESLSDYVMPQQKDAHIGMWYRALTSVGPRTDVLTLHFHLPTVEKAAAELALVPR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-04-28
Deposition Author(s): Balasco Serrao, V.H. , Dubois, R.M. , Dzimianski, J.V. , Ghosh, A.