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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9OCC

Sf11 bacteriophage tail

PDB DOI: 10.2210/pdb9occ/pdb

Classification: VIRUS
Organism(s): Shigella Phage Sf11 Smd-2017

Deposited: 2025-04-24
Deposition Author(s): Parent, K.N. , Subramanian, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

Literature

Sf11 bacteriophage tail

Parent, K.N. , Subramanian, S.

Primary Citation of Related Structures: 9OCC


Proteins
Molecule Chains Sequence Length Organism Sequence
Putative neck whiskers protein gp24 A 238 Shigella Phage Sf11 Smd-2017 MAICANDKGVLVGRMTRLFLAEGCGDAVPDAGDWKYLGSTTSKGVDYSPQTTTSEADTAGGFVSTLVTSSDMTISAEVEIRKNDPSDEFGFHRLVEIYATELKARRQPSLWVRQVTGATIVTAYCNITSISYEGGTNDIVTGSLEFKVYDSDSVTVESLEPLAFTTDLQSTGSTGTPLTVAVEGGVAPYTYVWRKDGVVVGSESGATLASPTAGVYTVTVTDSSTDPEVIISTACTVS
Putative neck whiskers protein gp24 B 238 Shigella Phage Sf11 Smd-2017 MAICANDKGVLVGRMTRLFLAEGCGDAVPDAGDWKYLGSTTSKGVDYSPQTTTSEADTAGGFVSTLVTSSDMTISAEVEIRKNDPSDEFGFHRLVEIYATELKARRQPSLWVRQVTGATIVTAYCNITSISYEGGTNDIVTGSLEFKVYDSDSVTVESLEPLAFTTDLQSTGSTGTPLTVAVEGGVAPYTYVWRKDGVVVGSESGATLASPTAGVYTVTVTDSSTDPEVIISTACTVS
Tail fiber protein gp17 C 457 Shigella Phage Sf11 Smd-2017 MAIIKYPDWIPLAQRASKNLTQQTPFRSDQPAVGAPIFQKLTTDIVATWSLTWVFTLAEERAFIQWLRSSRYLNKCNNWFTMMIDLGGSGLQEQTLHFTDYPVQTSIDGGVVTWTGNVIAKKLNNTMDEFDDVLVELDYRWYGWLDEVVNRELPQVYMTPILHMPINMLSSTLDSRIVYDGPQVYYINRNGNLVQSAANEWPLTFIDGVAVGRVPPENTSKNVILYNTNLTNVVWARTRMSITPSPQTGMLVNGCFKLTPTTDSNTHLVAQLPVFEILEGEVCTFSVIAKADGYRNVRIRIANNAVFVADVTVNLLSGVIIGGSANSSIENLGGGWFRFSEIVTPTEGGYSAIAMQIWVHDDSNSATFAGDGVSGILVCAPQSDSTGASMSPIATEASPVTRPTASAKVVMNGATSIDITYSDSSTINVPAVDNYAVIPQADSAWGSKYITTIKFNV
Tail fiber protein gp17 D 457 Shigella Phage Sf11 Smd-2017 MAIIKYPDWIPLAQRASKNLTQQTPFRSDQPAVGAPIFQKLTTDIVATWSLTWVFTLAEERAFIQWLRSSRYLNKCNNWFTMMIDLGGSGLQEQTLHFTDYPVQTSIDGGVVTWTGNVIAKKLNNTMDEFDDVLVELDYRWYGWLDEVVNRELPQVYMTPILHMPINMLSSTLDSRIVYDGPQVYYINRNGNLVQSAANEWPLTFIDGVAVGRVPPENTSKNVILYNTNLTNVVWARTRMSITPSPQTGMLVNGCFKLTPTTDSNTHLVAQLPVFEILEGEVCTFSVIAKADGYRNVRIRIANNAVFVADVTVNLLSGVIIGGSANSSIENLGGGWFRFSEIVTPTEGGYSAIAMQIWVHDDSNSATFAGDGVSGILVCAPQSDSTGASMSPIATEASPVTRPTASAKVVMNGATSIDITYSDSSTINVPAVDNYAVIPQADSAWGSKYITTIKFNV
Putative tail protein gp14 E 828 Shigella Phage Sf11 Smd-2017 MPVIHVQKMPGTPKETGIVPAGTNLWKWLNKSNLPASISITVNGRVLGEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVYEPYAFDDVDGQELYGPNELDTDPPPVVIETATTTTVTETEFAGGQIAVKIPKDPAFNYFVDLTMPHDVVFKLNITYAQGGGASVTENVTLSGRLVSATETDDGGLPPANYWYTFIINSINYSGAPISSLSGVTINNTYFNLTDNQPIVSGPYFSPIDGDQLWVHLQHQTNDGNDFSVLIEWWKIDDDNVQIPGTYQSMNYYRDVDRNDTFYYTIKLTPSAGTGRYAIQMRRTNNSSDTSILQLEEIHSIVTRTNVSYSDDTVVKVVVRATENATGSRDRKYNALITRHTIGYNRDAGTVRYTLAPSRSFADAVLHNWLITAGNPENTIDIVRLYEIADSLPDERLGYFDYTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKRDYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANVYYRITDSGIVEGEPTKAKKFDMLYVRNRYQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDMIQVVDMYDDVQQTGVIEARNGNTFTTSEQLTADDNLYVVITSSDGSVSGRLPATVTGLHTFTCNLPSDFQLNIWDGTSVQSESRYVLSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDEMYEYVISSS
gp16 F 156 Shigella Phage Sf11 Smd-2017 MPSLRDYKAKRPNWALFDTITFYHSSFGYVRLVANVLDEMVLGGETYSPVRMDITQSQQSNTPAINATVKFARLANDFKQYLKLWTGSGRIEPISALYQRFEETDTNTPLKPYRLYVSDVAMDGSDVTVALSIKNPIKGNVAKLYDIAQFPGLRNV
Putative tail protein gp13 G 585 Shigella Phage Sf11 Smd-2017 MATVPTNNPIPSEDPRDLKFNAGKIDEVVNSDAHYYTDRFGKQRWTMAGFQKTTQDAIRSYGYITMDGFEDGATLTLPNQVLRYEATGEYYRWDGDFPKTVSSGSTPETAGGVGSGAWLSVGDGSLRADLSSTDDGRGCSLIGTSDGSNVQEALDDINNTIYQDPLTKWPLGGTLKIKQGVYDVSSALTLDYGNYDATFIGSPGVRAHYVGENMAETIFNCQVADFNLKMLGDTVGATQRVHAYDYLGNITLKGSATSYGLLVTKKAYTKLENIVSYGHTNGEGLRTDSVLTAELDNVYLQSNRIGWRVLNTGDESELNAITVNRLTASQNTQWGILGDRWGAGTTINSLTCEGNGTQGDSGTGGMQIAVNGLNGSCALVLNNPYFEANAGGSDLAIDNTGTRPVTVIINGGNFHRVSSTAYTVNNLSITSSGGGKVTVILNGTTFQSVGSYVPSSARPYWVTGANCEVIDIGCTFMEQTSKATSVSSGSIPRSGRINSNGSIDVAPGVSSVNMVTTGVYDVTFSQQLSTSANGYVVQITPISAPDSVSCDVIYSSTTSFRVTLRNTVSGAGIASAFAFSVTRLV
Putative tail protein gp13 H 585 Shigella Phage Sf11 Smd-2017 MATVPTNNPIPSEDPRDLKFNAGKIDEVVNSDAHYYTDRFGKQRWTMAGFQKTTQDAIRSYGYITMDGFEDGATLTLPNQVLRYEATGEYYRWDGDFPKTVSSGSTPETAGGVGSGAWLSVGDGSLRADLSSTDDGRGCSLIGTSDGSNVQEALDDINNTIYQDPLTKWPLGGTLKIKQGVYDVSSALTLDYGNYDATFIGSPGVRAHYVGENMAETIFNCQVADFNLKMLGDTVGATQRVHAYDYLGNITLKGSATSYGLLVTKKAYTKLENIVSYGHTNGEGLRTDSVLTAELDNVYLQSNRIGWRVLNTGDESELNAITVNRLTASQNTQWGILGDRWGAGTTINSLTCEGNGTQGDSGTGGMQIAVNGLNGSCALVLNNPYFEANAGGSDLAIDNTGTRPVTVIINGGNFHRVSSTAYTVNNLSITSSGGGKVTVILNGTTFQSVGSYVPSSARPYWVTGANCEVIDIGCTFMEQTSKATSVSSGSIPRSGRINSNGSIDVAPGVSSVNMVTTGVYDVTFSQQLSTSANGYVVQITPISAPDSVSCDVIYSSTTSFRVTLRNTVSGAGIASAFAFSVTRLV
Putative tail protein gp13 I 585 Shigella Phage Sf11 Smd-2017 MATVPTNNPIPSEDPRDLKFNAGKIDEVVNSDAHYYTDRFGKQRWTMAGFQKTTQDAIRSYGYITMDGFEDGATLTLPNQVLRYEATGEYYRWDGDFPKTVSSGSTPETAGGVGSGAWLSVGDGSLRADLSSTDDGRGCSLIGTSDGSNVQEALDDINNTIYQDPLTKWPLGGTLKIKQGVYDVSSALTLDYGNYDATFIGSPGVRAHYVGENMAETIFNCQVADFNLKMLGDTVGATQRVHAYDYLGNITLKGSATSYGLLVTKKAYTKLENIVSYGHTNGEGLRTDSVLTAELDNVYLQSNRIGWRVLNTGDESELNAITVNRLTASQNTQWGILGDRWGAGTTINSLTCEGNGTQGDSGTGGMQIAVNGLNGSCALVLNNPYFEANAGGSDLAIDNTGTRPVTVIINGGNFHRVSSTAYTVNNLSITSSGGGKVTVILNGTTFQSVGSYVPSSARPYWVTGANCEVIDIGCTFMEQTSKATSVSSGSIPRSGRINSNGSIDVAPGVSSVNMVTTGVYDVTFSQQLSTSANGYVVQITPISAPDSVSCDVIYSSTTSFRVTLRNTVSGAGIASAFAFSVTRLV
Putative tail protein gp13 J 585 Shigella Phage Sf11 Smd-2017 MATVPTNNPIPSEDPRDLKFNAGKIDEVVNSDAHYYTDRFGKQRWTMAGFQKTTQDAIRSYGYITMDGFEDGATLTLPNQVLRYEATGEYYRWDGDFPKTVSSGSTPETAGGVGSGAWLSVGDGSLRADLSSTDDGRGCSLIGTSDGSNVQEALDDINNTIYQDPLTKWPLGGTLKIKQGVYDVSSALTLDYGNYDATFIGSPGVRAHYVGENMAETIFNCQVADFNLKMLGDTVGATQRVHAYDYLGNITLKGSATSYGLLVTKKAYTKLENIVSYGHTNGEGLRTDSVLTAELDNVYLQSNRIGWRVLNTGDESELNAITVNRLTASQNTQWGILGDRWGAGTTINSLTCEGNGTQGDSGTGGMQIAVNGLNGSCALVLNNPYFEANAGGSDLAIDNTGTRPVTVIINGGNFHRVSSTAYTVNNLSITSSGGGKVTVILNGTTFQSVGSYVPSSARPYWVTGANCEVIDIGCTFMEQTSKATSVSSGSIPRSGRINSNGSIDVAPGVSSVNMVTTGVYDVTFSQQLSTSANGYVVQITPISAPDSVSCDVIYSSTTSFRVTLRNTVSGAGIASAFAFSVTRLV
Putative tail protein gp13 K 585 Shigella Phage Sf11 Smd-2017 MATVPTNNPIPSEDPRDLKFNAGKIDEVVNSDAHYYTDRFGKQRWTMAGFQKTTQDAIRSYGYITMDGFEDGATLTLPNQVLRYEATGEYYRWDGDFPKTVSSGSTPETAGGVGSGAWLSVGDGSLRADLSSTDDGRGCSLIGTSDGSNVQEALDDINNTIYQDPLTKWPLGGTLKIKQGVYDVSSALTLDYGNYDATFIGSPGVRAHYVGENMAETIFNCQVADFNLKMLGDTVGATQRVHAYDYLGNITLKGSATSYGLLVTKKAYTKLENIVSYGHTNGEGLRTDSVLTAELDNVYLQSNRIGWRVLNTGDESELNAITVNRLTASQNTQWGILGDRWGAGTTINSLTCEGNGTQGDSGTGGMQIAVNGLNGSCALVLNNPYFEANAGGSDLAIDNTGTRPVTVIINGGNFHRVSSTAYTVNNLSITSSGGGKVTVILNGTTFQSVGSYVPSSARPYWVTGANCEVIDIGCTFMEQTSKATSVSSGSIPRSGRINSNGSIDVAPGVSSVNMVTTGVYDVTFSQQLSTSANGYVVQITPISAPDSVSCDVIYSSTTSFRVTLRNTVSGAGIASAFAFSVTRLV
Putative tail protein gp13 L 585 Shigella Phage Sf11 Smd-2017 MATVPTNNPIPSEDPRDLKFNAGKIDEVVNSDAHYYTDRFGKQRWTMAGFQKTTQDAIRSYGYITMDGFEDGATLTLPNQVLRYEATGEYYRWDGDFPKTVSSGSTPETAGGVGSGAWLSVGDGSLRADLSSTDDGRGCSLIGTSDGSNVQEALDDINNTIYQDPLTKWPLGGTLKIKQGVYDVSSALTLDYGNYDATFIGSPGVRAHYVGENMAETIFNCQVADFNLKMLGDTVGATQRVHAYDYLGNITLKGSATSYGLLVTKKAYTKLENIVSYGHTNGEGLRTDSVLTAELDNVYLQSNRIGWRVLNTGDESELNAITVNRLTASQNTQWGILGDRWGAGTTINSLTCEGNGTQGDSGTGGMQIAVNGLNGSCALVLNNPYFEANAGGSDLAIDNTGTRPVTVIINGGNFHRVSSTAYTVNNLSITSSGGGKVTVILNGTTFQSVGSYVPSSARPYWVTGANCEVIDIGCTFMEQTSKATSVSSGSIPRSGRINSNGSIDVAPGVSSVNMVTTGVYDVTFSQQLSTSANGYVVQITPISAPDSVSCDVIYSSTTSFRVTLRNTVSGAGIASAFAFSVTRLV
Tail tape measure protein gp18 M 780 Shigella Phage Sf11 Smd-2017 MAEEVGGIVYEVGMDVKGLKAGATTANKTLDDLESSLNKTTGEFNKLDKGARNAGSGMKNAGGAASGLKTSMSMLAGAISVSLIIEWGKRFLEVADNMTQLQARIARLSTDAKTANETFSSLANIASTTGASLSDTTKLWETLTSSLKEAGATNAQVLNLTDTLQKIGRIGGSSTEEMANALRQFGQSIASGTIRAEEFNSILEQMPELARQIAAGLGISMGELRARMLDGKLTAEDALNAIQDRTSVVNAEFEKLPRTMDQAVGSLEVSFSKLVVAVNDATGASKTAVEIIDQLAKYIDFLGDKSTSTSDKILSLATVISKLNPGAWAQMGVDALFGDDDIEKQKQYNDQVERFVKASAEGYEQTKKQAEATKHLKIAQAPTKDKKGKGKGKSAEERQAESVAEKLEKLRQQTMLNATSTGELSREQAILNAQQSLGKAATQEQIKLAGEYAAKIWDQKNALKEQAAAEKERIDAVKGYSALKSKASPMFAVETSYQKDMADLDAYAKAYPQKMAEIQQTRATIEEQYRQQRMDAMWQEWSQQNAATQAAAAAFDAFGQTAGNALTGILTGSMSVSEALRSIGSNILSSVINAFVQMGIQWAQSVIMGQAGMAAASAATIAQAAAISAAMAPAAAMTSLATAGTNSAPAMAGMSATVGLAKTLSIAGALKNGGPAQEGSMYRVGENNLPEIFQASNGHQYMIPGDSGRVISNKDLTGGGGGVVVYNNVINNSSAQVSSSARDNGDGSVTIETIISDIENNGPIGQSISRNYSANRRATE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-04-24
Deposition Author(s): Parent, K.N. , Subramanian, S.