9OC4
High-resolution cryo-em structure of kdpfabc in the e1p-adp state in lipid nanodisc
PDB DOI: 10.2210/pdb9oc4/pdb
Classification: TRANSPORT PROTEIN Organism(s): Sphingobium Sp. (Strain Nbrc 103272 / Syk-6)
Deposited: 2025-04-23 Deposition Author(s): Hussein, A.K. , Pedersen, B.P. , Stokes, D.L. , Zhang, X.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.1 Å
High-resolution cryo-em structure of kdpfabc in the e1p-adp state in lipid nanodisc
Hussein, A.K. , Pedersen, B.P. , Stokes, D.L. , Zhang, X.
Primary Citation of Related Structures: 9OC4
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Potassium-transporting ATPase potassium-binding subunit | A | 557 | Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) | MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVERVLFRALGVSDREMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSMSTLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVMGDRRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGTDSSINMEGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLVSKKSQAASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS |
| Potassium-transporting ATPase ATP-binding subunit | B | 682 | Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) | MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSLLTTCISIAMASGAMPGNALFSAAISGWLWITVLFANFAEALAEGRSKAQANSLKGVKKTAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITGESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMCLHSPDSAILSAVIFNALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV |
| Potassium-transporting ATPase KdpC subunit | C | 208 | Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) | MSGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIREGDTVRGSALIGQNFTGNGYFHGRPSATAEMPYNPQASGGSNLAVSNPELDKLIAARVAALRAANPDASASVPVELVTASASGLDNNITPQAAAWQIPRVAKARNLSVEQLTQLIAKYSQQPLVKYIGQPVVNIVELNLALDKLDEGTGLVPRGSSHHHHHHHH |
| Potassium-transporting ATPase KdpF subunit | D | 29 | Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) | MSAGVITGVLLVFLLLGYLVYALINAEAF |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-04-23 Deposition Author(s): Hussein, A.K. , Pedersen, B.P. , Stokes, D.L. , Zhang, X.