Crystal structure of broadly neutralizing antibody hepc108 in complex with hepatitis c virus envelope glycoprotein e2 ectodomain
PDB DOI: 10.2210/pdb9o3d/pdb
Classification: IMMUNE SYSTEM Organism(s): Hepatitis C Virus Subtype 1B , Homo Sapiens
Deposited: 2025-04-07 Deposition Author(s): Flyak, A.I. , Wilcox, X.E.
Crystal structure of broadly neutralizing antibody hepc108 in complex with hepatitis c virus envelope glycoprotein e2 ectodomain
Primary Citation of Related Structures: 9O3D
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HEPC108 Fab Heavy Chain | A | 237 | Hepatitis C Virus Subtype 1B , Homo Sapiens | QVQLVQSGAEVKKPGSSVKVSCKASGDTFSSSAISWVRQAPGQGLEWMGGSIPIFGATKYAQKFQGRVTITTDKSTSTAYMELSSLRFEDTAVYYCARASIVNISGFVRFRFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH |
| HEPC108 Fab Heavy Chain | E | 237 | Hepatitis C Virus Subtype 1B , Homo Sapiens | QVQLVQSGAEVKKPGSSVKVSCKASGDTFSSSAISWVRQAPGQGLEWMGGSIPIFGATKYAQKFQGRVTITTDKSTSTAYMELSSLRFEDTAVYYCARASIVNISGFVRFRFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH |
| HEPC108 Fab Heavy Chain | H | 237 | Hepatitis C Virus Subtype 1B , Homo Sapiens | QVQLVQSGAEVKKPGSSVKVSCKASGDTFSSSAISWVRQAPGQGLEWMGGSIPIFGATKYAQKFQGRVTITTDKSTSTAYMELSSLRFEDTAVYYCARASIVNISGFVRFRFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH |
| HEPC108 Fab Heavy Chain | I | 237 | Hepatitis C Virus Subtype 1B , Homo Sapiens | QVQLVQSGAEVKKPGSSVKVSCKASGDTFSSSAISWVRQAPGQGLEWMGGSIPIFGATKYAQKFQGRVTITTDKSTSTAYMELSSLRFEDTAVYYCARASIVNISGFVRFRFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH |
| HEPC108 Fab Light Chain | B | 216 | Hepatitis C Virus Subtype 1B , Homo Sapiens | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDVSNLEIGVPSRFSGSGSGTEFTLTINSLQPEDLATYFCQHYDDVPPVYTFGQGTSLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| HEPC108 Fab Light Chain | F | 216 | Hepatitis C Virus Subtype 1B , Homo Sapiens | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDVSNLEIGVPSRFSGSGSGTEFTLTINSLQPEDLATYFCQHYDDVPPVYTFGQGTSLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| HEPC108 Fab Light Chain | J | 216 | Hepatitis C Virus Subtype 1B , Homo Sapiens | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDVSNLEIGVPSRFSGSGSGTEFTLTINSLQPEDLATYFCQHYDDVPPVYTFGQGTSLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| HEPC108 Fab Light Chain | L | 216 | Hepatitis C Virus Subtype 1B , Homo Sapiens | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDVSNLEIGVPSRFSGSGSGTEFTLTINSLQPEDLATYFCQHYDDVPPVYTFGQGTSLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Envelope Glycoprotein E2 | C | 262 | Hepatitis C Virus Subtype 1B , Homo Sapiens | STHVTGGTASHTTRHFASLFSSGASQRVQLINTNGSWHINRTALNCNDSLHTGFLAALFYTHKFNASGCPERMAHCRPIDEFAQGWGPITYAEGHGSDQRPYCWHYAPRQCGTIPASQVCGPVYCFTPSPVVVGTTDRFGAPTYTWGENETDVLILNNTRPPQGNWFGCTWMNSTGFTKTCGGPPCNIGGVGNNTLTCPTDCFRKHPEATYTKCGSGPWLTPRCLVDYPYRLWHYPCTVNFTIFKVRMYVGGVEHRLNAACN |
| Envelope Glycoprotein E2 | D | 262 | Hepatitis C Virus Subtype 1B , Homo Sapiens | STHVTGGTASHTTRHFASLFSSGASQRVQLINTNGSWHINRTALNCNDSLHTGFLAALFYTHKFNASGCPERMAHCRPIDEFAQGWGPITYAEGHGSDQRPYCWHYAPRQCGTIPASQVCGPVYCFTPSPVVVGTTDRFGAPTYTWGENETDVLILNNTRPPQGNWFGCTWMNSTGFTKTCGGPPCNIGGVGNNTLTCPTDCFRKHPEATYTKCGSGPWLTPRCLVDYPYRLWHYPCTVNFTIFKVRMYVGGVEHRLNAACN |
| Envelope Glycoprotein E2 | G | 262 | Hepatitis C Virus Subtype 1B , Homo Sapiens | STHVTGGTASHTTRHFASLFSSGASQRVQLINTNGSWHINRTALNCNDSLHTGFLAALFYTHKFNASGCPERMAHCRPIDEFAQGWGPITYAEGHGSDQRPYCWHYAPRQCGTIPASQVCGPVYCFTPSPVVVGTTDRFGAPTYTWGENETDVLILNNTRPPQGNWFGCTWMNSTGFTKTCGGPPCNIGGVGNNTLTCPTDCFRKHPEATYTKCGSGPWLTPRCLVDYPYRLWHYPCTVNFTIFKVRMYVGGVEHRLNAACN |
| Envelope Glycoprotein E2 | K | 262 | Hepatitis C Virus Subtype 1B , Homo Sapiens | STHVTGGTASHTTRHFASLFSSGASQRVQLINTNGSWHINRTALNCNDSLHTGFLAALFYTHKFNASGCPERMAHCRPIDEFAQGWGPITYAEGHGSDQRPYCWHYAPRQCGTIPASQVCGPVYCFTPSPVVVGTTDRFGAPTYTWGENETDVLILNNTRPPQGNWFGCTWMNSTGFTKTCGGPPCNIGGVGNNTLTCPTDCFRKHPEATYTKCGSGPWLTPRCLVDYPYRLWHYPCTVNFTIFKVRMYVGGVEHRLNAACN |
Method: X-RAY DIFFRACTION
Deposited Date: 2025-04-07 Deposition Author(s): Flyak, A.I. , Wilcox, X.E.