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9NZP

Cryo-em structure of rhcas12f-grna-dna ternary complex

PDB DOI: 10.2210/pdb9nzp/pdb

Classification: RNA BINDING PROTEIN/DNA/RNA
Organism(s): Ruminiclostridium Herbifermentans , Synthetic Construct

Deposited: 2025-04-01
Deposition Author(s): Guan, K. , Ocampo, R.F. , Taylor, D.W.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.07 Å

Literature

Cryo-em structure of rhcas12f-grna-dna ternary complex

Guan, K. , Ocampo, R.F. , Taylor, D.W.

Primary Citation of Related Structures: 9NZP


Proteins
Molecule Chains Sequence Length Organism Sequence
IS200/IS605 family element transposase accessory protein TnpB A 415 Ruminiclostridium Herbifermentans , Synthetic Construct MITVRKLKILIDGESRNESYKFIRDSMYAQYLALNKAMSYLGTAYLSRDKEIFKEAIKSLNNSNPIFDNINFGKGIDTKSSVNQTVKKHIQADIKNGLAKGERSIRNYKRDYPLMTRGRDLKFFYCDTNSTKVKVKWVNGIIFDVMLGKEYNKNDLELRSFLNRVINKEYKISQSSICFDKHNRLILNLSVNITDNIPNEVVKGRIVGVDLGMKIPAYVTLNDSEYIGKPIGDINDFLKVRKQFKERKERLQKQLAINKGGRGITNKMQLMDAFTNKEKNFANTYNHGVSKAIINFAKKYKAEQINVEFLALAGSEKEILSSTIRYWSYYQLQQMIEYKANREGIAVKYVDPYLTSQTCCKCGNYEVGQRINQELFECKLCGNKMNADRNASFNIARSTKYISSKEESDFYKQLK
IS200/IS605 family element transposase accessory protein TnpB B 415 Ruminiclostridium Herbifermentans , Synthetic Construct MITVRKLKILIDGESRNESYKFIRDSMYAQYLALNKAMSYLGTAYLSRDKEIFKEAIKSLNNSNPIFDNINFGKGIDTKSSVNQTVKKHIQADIKNGLAKGERSIRNYKRDYPLMTRGRDLKFFYCDTNSTKVKVKWVNGIIFDVMLGKEYNKNDLELRSFLNRVINKEYKISQSSICFDKHNRLILNLSVNITDNIPNEVVKGRIVGVDLGMKIPAYVTLNDSEYIGKPIGDINDFLKVRKQFKERKERLQKQLAINKGGRGITNKMQLMDAFTNKEKNFANTYNHGVSKAIINFAKKYKAEQINVEFLALAGSEKEILSSTIRYWSYYQLQQMIEYKANREGIAVKYVDPYLTSQTCCKCGNYEVGQRINQELFECKLCGNKMNADRNASFNIARSTKYISSKEESDFYKQLK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Target strand DNA c 45 NA AATTCCACTGAGGACTCCAACATCACCATGCAGGTGGGTTACGTA
Non-target strand DNA d 45 NA TACGTAACCCACCTGCATGGTGATGTTGGAGTCCTCAGTGGAATT
guide RNA e 160 NA ACGGCUGAUUUAGCAGCCGAAGUCUGAGGGCAUGUAGAAAAAAGUAUAGGUAUAUACCAACAUACUUGCAUUGCCACUCGGAAAGGGUUAACCUUGGUCAUUGUGUUACCGACCAAGCAUUCCAGAAAUGGAAUGUAAAUCCUGCAUGGUGAUGUUGGAG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-04-01
Deposition Author(s): Guan, K. , Ocampo, R.F. , Taylor, D.W.