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9NW1

Cryo-em structure of rhesus antibody ch42-apex2.01 in complex with hiv env trimer q23-apex-gt2

PDB DOI: 10.2210/pdb9nw1/pdb

Classification: VIRAL PROTEIN/IMMUE SYSTEM
Organism(s): Human Immunodeficiency Virus Type 1 , Macaca Mulatta

Deposited: 2025-03-21
Deposition Author(s): Kwong, P.D. , Roark, R.S. , Shapiro, L.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

9nw1
Literature

Cryo-em structure of rhesus antibody ch42-apex2.01 in complex with hiv env trimer q23-apex-gt2

Kwong, P.D. , Roark, R.S. , Shapiro, L.S.

Primary Citation of Related Structures: 9NW1


Proteins
Molecule Chains Sequence Length Organism Sequence
CH42-Apex2.01 heavy chain H 244 Human Immunodeficiency Virus Type 1 , Macaca Mulatta EVQLVESGPAVVKPSETLSLTCVVSGVSINSNNWWTWIRQSPGKGLEWIGEIHDSGGNTQYNPSLKSRVTISIDTSENQLSLKLTSVTAADTAVYYCARQTEEYYLDDYDYSYNGYNRFDVWGAGVLVTISSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGGLEVLFQ
CH42-Apex2.01 kappa chain L 214 Human Immunodeficiency Virus Type 1 , Macaca Mulatta AIQMTQSPSSLSASVGDRVTITCRPSENINNYLHWYQQKPGKAPKLLIYAAYTLQGGVPSRFSGSGSGTDFALTISSLQAEDVATYFCQHSWTTPYSFGQGTKVEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC
HIV envelope gp120 B 478 Human Immunodeficiency Virus Type 1 , Macaca Mulatta AENLWVTVYYGVPVWRDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLDNVTEKFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLHCRNVTSVNTTGDREELKNCTFNMTTELRDKRQKVYSLFYRLDIVPINENQGSEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDEGFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKNITIRSENITNNAKIIIVQLVQPVTIKCIRPNNYTRKSIRIGPGQAFYAMGDIIGDIRQAHCNVSRSRWNKTLQEVAEKLRTYFGNKTIIFANSSGGDLEITTHSFNCGGEFFYCNTSGLFNSTWYVNSTWNDTDSTQESNDTITLPCRIKQIINMWQRAGQCMYAPPIPGVIKCESNITGLLLTRDGGKDNNVNETFRPGGGDMRDNWRSELYKYKVVEIEPLGVAPTRCKRRVVEGGGGSGGGGS
HIV envelope gp120 D 478 Human Immunodeficiency Virus Type 1 , Macaca Mulatta AENLWVTVYYGVPVWRDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLDNVTEKFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLHCRNVTSVNTTGDREELKNCTFNMTTELRDKRQKVYSLFYRLDIVPINENQGSEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDEGFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKNITIRSENITNNAKIIIVQLVQPVTIKCIRPNNYTRKSIRIGPGQAFYAMGDIIGDIRQAHCNVSRSRWNKTLQEVAEKLRTYFGNKTIIFANSSGGDLEITTHSFNCGGEFFYCNTSGLFNSTWYVNSTWNDTDSTQESNDTITLPCRIKQIINMWQRAGQCMYAPPIPGVIKCESNITGLLLTRDGGKDNNVNETFRPGGGDMRDNWRSELYKYKVVEIEPLGVAPTRCKRRVVEGGGGSGGGGS
HIV envelope gp120 F 478 Human Immunodeficiency Virus Type 1 , Macaca Mulatta AENLWVTVYYGVPVWRDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLDNVTEKFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLHCRNVTSVNTTGDREELKNCTFNMTTELRDKRQKVYSLFYRLDIVPINENQGSEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDEGFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKNITIRSENITNNAKIIIVQLVQPVTIKCIRPNNYTRKSIRIGPGQAFYAMGDIIGDIRQAHCNVSRSRWNKTLQEVAEKLRTYFGNKTIIFANSSGGDLEITTHSFNCGGEFFYCNTSGLFNSTWYVNSTWNDTDSTQESNDTITLPCRIKQIINMWQRAGQCMYAPPIPGVIKCESNITGLLLTRDGGKDNNVNETFRPGGGDMRDNWRSELYKYKVVEIEPLGVAPTRCKRRVVEGGGGSGGGGS
HIV envelope gp41 ectodomain C 153 Human Immunodeficiency Virus Type 1 , Macaca Mulatta AVGIGAVRRGFLGAAGSTMGAASITLTVQARQLLSGIVQPQNNLLRAPEAQQHLLKLGVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNKSLDEIWNNMTWLQWDKEIGNYTQLIYRLIEESQNQQEKNEKELLALD
HIV envelope gp41 ectodomain E 153 Human Immunodeficiency Virus Type 1 , Macaca Mulatta AVGIGAVRRGFLGAAGSTMGAASITLTVQARQLLSGIVQPQNNLLRAPEAQQHLLKLGVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNKSLDEIWNNMTWLQWDKEIGNYTQLIYRLIEESQNQQEKNEKELLALD
HIV envelope gp41 ectodomain G 153 Human Immunodeficiency Virus Type 1 , Macaca Mulatta AVGIGAVRRGFLGAAGSTMGAASITLTVQARQLLSGIVQPQNNLLRAPEAQQHLLKLGVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNKSLDEIWNNMTWLQWDKEIGNYTQLIYRLIEESQNQQEKNEKELLALD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-03-21
Deposition Author(s): Kwong, P.D. , Roark, R.S. , Shapiro, L.S.