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9NRT

Crystal structure of the h5 influenza virus hemagglutinin from a/duck/france/161108h/2016 (h5n8) clade 2.3.4.4b in complex with o-linked glycan 25

PDB DOI: 10.2210/pdb9nrt/pdb

Classification: VIRAL PROTEIN
Organism(s): Influenza A Virus , Synthetic Construct

Deposited: 2025-03-14
Deposition Author(s): Wilson, I.A. , Zhu, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.98 Å

Literature

Crystal structure of the h5 influenza virus hemagglutinin from a/duck/france/161108h/2016 (h5n8) clade 2.3.4.4b in complex with o-linked glycan 25

Wilson, I.A. , Zhu, X.

Primary Citation of Related Structures: 9NRT


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin HA1 chain A 329 Influenza A Virus , Synthetic Construct DPGDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGSLNDYEELKHLLSRINHFEKILIIPKSSWPNHETSLGVSAACPYQGTPSFFRNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPTTYISVGTSTLNQRLVPKIATRSQVNGQRGRMDFFWTILKPNDAIHFESNGNFIAPEYAYKIVKKGDSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLRNSPQRETR
Hemagglutinin HA1 chain C 329 Influenza A Virus , Synthetic Construct DPGDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGSLNDYEELKHLLSRINHFEKILIIPKSSWPNHETSLGVSAACPYQGTPSFFRNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPTTYISVGTSTLNQRLVPKIATRSQVNGQRGRMDFFWTILKPNDAIHFESNGNFIAPEYAYKIVKKGDSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLRNSPQRETR
Hemagglutinin HA1 chain E 329 Influenza A Virus , Synthetic Construct DPGDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGSLNDYEELKHLLSRINHFEKILIIPKSSWPNHETSLGVSAACPYQGTPSFFRNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPTTYISVGTSTLNQRLVPKIATRSQVNGQRGRMDFFWTILKPNDAIHFESNGNFIAPEYAYKIVKKGDSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLRNSPQRETR
Hemagglutinin HA2 chain B 181 Influenza A Virus , Synthetic Construct GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEIGSGRLVPR
Hemagglutinin HA2 chain D 181 Influenza A Virus , Synthetic Construct GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEIGSGRLVPR
Hemagglutinin HA2 chain F 181 Influenza A Virus , Synthetic Construct GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEIGSGRLVPR
Peptide linker G 5 Influenza A Virus , Synthetic Construct FVTIG
Peptide linker H 5 Influenza A Virus , Synthetic Construct FVTIG
Peptide linker I 5 Influenza A Virus , Synthetic Construct FVTIG
Peptide linker J 5 Influenza A Virus , Synthetic Construct FVTIG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-03-14
Deposition Author(s): Wilson, I.A. , Zhu, X.