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FASTA Sequence PDB Format mmCIF Format
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9NRI

Methanosarcina acetivorans 50s subunit obtained from acetate-grown cells

PDB DOI: 10.2210/pdb9nri/pdb

Classification: RIBOSOME
Organism(s): Methanosarcina Acetivorans

Deposited: 2025-03-14
Deposition Author(s): Armache, J.-P. , Bevilacqua, P.C. , Ferry, J.G. , Fordjour, G.N.R. , Ghosh, A. , Murakami, K.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.85 Å

9nri
Literature

Methanosarcina acetivorans 50s subunit obtained from acetate-grown cells

Armache, J.-P. , Bevilacqua, P.C. , Ferry, J.G. , Fordjour, G.N.R. , Ghosh, A. , Murakami, K.S.

Primary Citation of Related Structures: 9NRI


Proteins
Molecule Chains Sequence Length Organism Sequence
Large ribosomal subunit protein eL32 BA 161 Methanosarcina Acetivorans MIMMAEEFNEVEGTNEVEDINEVEGTSVSTLDMDPESRRLFNVRKVQKGKKPQFKRTCSHKFKRLDDNWRRPRGSQGKQRRKYVSKGALVQVGYGSPAAVKGLHPSGYSDVLISSIAELELVDPSYEAIRIAGTIGAQKKALILAKAEEAGIKVLNSGRSE
Large ribosomal subunit protein uL13 BJ 143 Methanosarcina Acetivorans MLKMTVIDAKGLILGRLASSVAKQLLSGDEKVYIINAEQAIISGSRAATLREYRETRERGATEFGPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGVPYELKGAETVTIPDADMRLLSSSRYVELGEVSQKMGSKF
Large ribosomal subunit protein uL14 BK 132 Methanosarcina Acetivorans MKGMRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPVAREVAERFPKIGTTASIIV
Large ribosomal subunit protein uL15 BL 140 Methanosarcina Acetivorans MDTKKFRGSRTCGGGTHKNRRGAGNRGGRGKAGGCKHHFVRAMMRGYSYGKHGFKRPDEVSRDVSIVNVGELDELASYLVEEGLAEVKDGAYHINLENLGIEKVLGSGRVTKNLVVTSEEFSASAREKIENAGGSCIDAE
Large ribosomal subunit protein eL15 BM 196 Methanosarcina Acetivorans MVKSFYGYVRDAWKNPDETYVNELRWERLQVWRKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRGGLGHVRPNRGRRTQKMGKNKVSGGMSIQRIAEVRADRRYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWVCDPSSRGRATRGKTSAGRKGRGMATRGKGTEKTRPSIRAYKSRGK
Large ribosomal subunit protein uL18 BN 174 Methanosarcina Acetivorans MATGPRYKVPFRRRREGRTNYHLRLKLLLSRQDRVVVRKSSRNVQIQLIAPTPDGDITYSSAVSNELAKYGYTGATGNTTAAYLTGLLFGLKSLQKGYEGGILDIGLQASSAGSRVYAALKGVVDSGFEIPCSPEVFPPDERIRGEHIAGYREESSDLPEQFEATKEKIFAEFS
Large ribosomal subunit protein eL18 BO 126 Methanosarcina Acetivorans MGKKSLVKLTRKTNPRIVSLILTLKERANGDSAPIWKDIAKRLEAPSRNYAAVNISKINRHTAEDDVLLIPGKVLGAGLLDHPVTIAALTFSDSAFEKITEAGGKCLSLEEIMEANPKGSGIRIFR
Large ribosomal subunit protein eL19 BP 151 Methanosarcina Acetivorans MSDLSNQRKLASKVLGCGLDRVWLNPEASEEIASAITREDIRGLIEEGTIKAKPVKGVSRGRARALAAKRKYGHCKGHGSRKGKKGARTPKKEQWIKKIRALRRRLKELRADGALDKSVYCRLYRKAKGGEYRSVSHLNSHLESEKLLKKE
Large ribosomal subunit protein eL20 BQ 61 Methanosarcina Acetivorans MVMMKSFIVKGKFKAGSTWEKFTKKIESQNEKNATDKTYSIFGSKHGVKRSQVQIESVAEE
Large ribosomal subunit protein eL21 BR 97 Methanosarcina Acetivorans MTNSHGEKRCTRYKLQKTVRERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGSTGKVIGQRGRSYVLEVRSGNAMKEVFSLPQHLKPQKY
Large ribosomal subunit protein uL22 BS 151 Methanosarcina Acetivorans MARINYSINGDPETTSKAMGSELHISPKKSREVCCKIKGMKASEARKFLEDVIAMKQAVPFKKHHDGSGHRKGPMAAGKYPISASKEILKVLKNAESNAEYKGLEPANMYIIHAAIQRGRVIHGFMPRARGRATPKDTETVNIEMILSEVR
Large ribosomal subunit protein eL43 BB 94 Methanosarcina Acetivorans MAKKFTKKGRISRSAGRFGPRYGRKDRKLVADLEERMRAPHVCTKCARPTVERIGTGIWKCSKCGHTFAGGTYIPYTSVGQTLLRTMKNIAEAK
Large ribosomal subunit protein uL23 BT 82 Methanosarcina Acetivorans MSSINYPFVTEKAMMLLDENKLQFIVDTRSNKKQILEDVEKMYGFKVKSVRTMTTMKGMKKAVLAFEEPEAAHEIATRIGLM
Large ribosomal subunit protein uL24 BU 119 Methanosarcina Acetivorans MIAMVSKQPRKQRKARYAAPLHIRQKFMGARLSEALTKEYGTRSAAVITGDTVKVMRGDFKGTEGKVQSVSLMDGTITVDGVISTKVDGTEVPRPLNPSNVMITKLEMKDGRRASSIKK
Large ribosomal subunit protein eL24 BV 62 Methanosarcina Acetivorans MEQRKCYFCGKMLEPGTGKLYVKKDGSTYFMCSSKCMSNFALGRLPRRTEWTEKGKIQLKKA
Large ribosomal subunit protein uL29 BW 67 Methanosarcina Acetivorans MAILRTSEIRTMTIEERADELENLNNELVRERALTSAGGAPENPGRIGEIRRTIARIKTIQHELNEI
Large ribosomal subunit protein uL30 BX 153 Methanosarcina Acetivorans MYAVVRLRGQVNVRYTIEDTMKMLRLHKVNHCVFVPENPHYKGMVQKVKDYVAYGKIDAKTLAEVLENRGRLEGDTRLTEEYIRENTDYDSIQAFAEAVIEGKSSLKDIPKLKPVFRLHPPRKGHAGIKRTVQQGGVLGNHDENINVLLHKMR
Large ribosomal subunit protein eL30 BY 99 Methanosarcina Acetivorans MMKMKINVDKSLIKAVKTGKVIVGANRTIDAAANGSAKMVVLASNCPEDIKKKIQATDIPVLEYEGTSVELGPVCGKPFTIAAMAILDVGESDILAATA
Large ribosomal subunit protein eL31 BZ 89 Methanosarcina Acetivorans MADDMVKEQIYTIPLREVRKVPAWKRANRAVIEVRGFLVRHMKTESVQVKLDKSINEHLWEKGCEKPPLSIRVRAVKFADGEVQAELAQ
Large ribosomal subunit protein uL2 BC 238 Methanosarcina Acetivorans MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVDENSSLRGEVVGIEHDPARSAPIAKVAFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTHEATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLIAARRTGMKR
Large ribosomal subunit protein uL3 BD 337 Methanosarcina Acetivorans MASIHRPKRGSLAFSPRKRAKSHIPRFRAWPEATGEPKLQSFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRRIPIPAAGNQAEALENIGKLIEEGRVSDVRAVIYTLPKSLTGVPKKVPDIMESGISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEEVTPEGGFINYGLVRGDYILIKGSVPGPSKRLIRLRDPIRAKKADLGEPNILYISRESKQG
Large ribosomal subunit protein uL4 BE 253 Methanosarcina Acetivorans MATAKTIDLTGKAVGEVELPAVFDADYRPDLIKKAVLAAQANRLQPYGPRLYSGMETSARGWGSGRGVSHVPRLVNSSRAARVPHAKGGRRAHPPKPEADRSEKVNTKERRYAIRSAIAATTDPTLVSLRGHIFEAELPIVAVNDLESLERTKQVIEFLEAAGLYEDVLRAKYGRHIRAGRGKLRGRKYKHKKSVLIVAGENTPILKAARNLSGVDVVTVDSLNAELLAPGTHAGRLTVWTESAIGKLEGAFQ
Large ribosomal subunit protein uL5 BF 165 Methanosarcina Acetivorans MRTPIVEKVIVHMGVGESGQHLVNAEDILRNITGQEVVRCFAKRTLPAFSIKKNEPIGCKVTLRGQKAQEFLETALGIVEKTLNRSQFDSFGNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKRPGERICKRRIAARKIPAGHRVTVDDAIAFLNESYGVEVM
Large ribosomal subunit protein uL6 BG 176 Methanosarcina Acetivorans MVKEIARTIEIPEGVSVSLAQDVFTATGPKGTVERKLWYPGIMIDVKDGEVVVDAEYARKEQKAMVGTFASHIRNLVKGVNEGFECKMSIVYAHFPMQVKVDGKTLIIGNFLGEKKPRFAKIIGETKVKVSGNDVTITGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQKA
Large ribosomal subunit protein eL8 BH 120 Methanosarcina Acetivorans MAQLAKFDVPEELTNKALEALELARDTGKIKKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIFIKNQKELGAASGLGVSCATVAIVDAGKAAEMVQDIAQKLEALK
Large ribosomal subunit protein uL16 BI 173 Methanosarcina Acetivorans MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKANTSFPVKISLIVEEKCQIRHTALEAARITANRHLVADTGKMGFYMKLRVYPHEVIRENKQATGAGADRVSSGMRRAFGKNVGTAARVKPMQKIFTVAVEKQNFKAAKEALWHAGQKLPTPCRIVVDEGAELVQ
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-03-14
Deposition Author(s): Armache, J.-P. , Bevilacqua, P.C. , Ferry, J.G. , Fordjour, G.N.R. , Ghosh, A. , Murakami, K.S.