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FASTA Sequence PDB Format mmCIF Format
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9NP6

Cryo-em structure of adna(d934a)-adnb(d1014a) in complex with amppnp and blunt end dna

PDB DOI: 10.2210/pdb9np6/pdb

Classification: ISOMERASE/DNA
Organism(s): Mycolicibacterium Smegmatis Mc2 155 , Synthetic Construct

Deposited: 2025-03-11
Deposition Author(s): De La Cruz, M.J. , Goldgur, Y. , Shuman, S. , Warren, G.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

9np6
Literature

Cryo-em structure of adna(d934a)-adnb(d1014a) in complex with amppnp and blunt end dna

De La Cruz, M.J. , Goldgur, Y. , Shuman, S. , Warren, G.M.

Primary Citation of Related Structures: 9NP6


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA 3'-5' helicase A 1046 Mycolicibacterium Smegmatis Mc2 155 , Synthetic Construct SMTTRPAESAPQTASTLLEPGSNGVVRLLGGPGTGKSSLLVDTAVQHILAGADPESVLLLTGSARLRTAARAAITARLLGAGTVGVVREPLVRTVHSYAFAVLRLAAQRNGDPPPRLITSAEQDGIIRELLAGDLEDGHRSPVGWPEQLWPALTTAGFATELRDLMARCTERGVDPIALQRLGRTAKRPEWLAAGRFAQAYEQIMLLRSAVGMAAPQATVPALGAAELVGAALEALGADDELLDTERNRIKLLLVDDAQHLDPQAARLVRALAAGTGLTVIAGDPDQSVFGYRGADPVLLRDDTHPAITLTQSYRCAPEIASAITGLGQRLPGVSDTRHWTGNPQREGTVTVRLAASTHAEGTMIADALRRAHLVDGIPWSQMAVIVRSVPRVGTALARALTAAGVPVQDNGTDVPVGRQPAAAALLTVLDVTATGHLDADSAVALLTGPIGRVDPVTLRQLRRALRRADGSQPPRDFGDLLVDAIEREPKGLSAEHARTLRRLRAVLTAARRSDASGADPRYTLWQAWHASGLQRRWLAASERGGSVGAQADRDLDAVTTLFDVADQYVNRTAGASLRGLVDHVTRLGAAVARTEPETAAEAVAVLSVHGALAGEWDFVVIAGVQEGLWPNMIPRGGVLGTQHLVDVLDGVADMTDRTVSTRAPLVAEERRLLMAAMGRARTRVMITAVDSDTGDESLLPSPFCAEISAWATEPVAEPPLVAPRVLAPSALVGRLRAVVCAPDGAVDDDARACAAAQLARLAAAGVPGADPSQWHAMTSLTTEEPLWSEPGHVVTLSPSTLQMLTDCPLRWLLERHGGDDGRDVRSTVGSLVHALVSEPGKTESQLVNELEKVWDDLPYDAKWYSDNELARHRAMLETFTRWREDTRRQLTEVATEIPVEGIVVEPGENTPGVRVRGRLDRLERDEAGRLVVVALKTGKSPVTKDDAQNHAQLAMYQLAVAAGLLDDGDEPGGGKLVYLGKAGAAGATEREQDPLTPDKRAEWLETVGEAAAATAGPRFVARVNNGCANCPVRSSCPAQANGDRP
DNA 3'-5' helicase B 1095 Mycolicibacterium Smegmatis Mc2 155 , Synthetic Construct MTQVASPVVQARYSPVELSAALGLFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGFATPSQVLGLTFTRKAAGQLLRRVRTRLARLAGAGLAPGSGASDESATVSTYHAFAGTLLREHGLLLPVEPDTRLLSETELWQLAYDVVCAHPGHLDTEKTPAAVTAMVLRLSGALAEHLVDTDQLRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELVPLIDALHQRMRAEKVMDFGMQMAAAARLAARFPQVGEQLRQRFRVVLLDEYQDTGHAQRIALSSLFGGGADDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPYSDGTPAPTLELRTSWRNPPSTLHVANAVSEEARRRSVAVRALRPRPDAEPGTIRCALLNNVAAERDWVADHLARAYHGAIGRGEAAPTAAVLVRRNADAAPMAEALTARGVPVEVVGVAGLLAVPEVADLVAMLRLIADPTAGSAVMRILTGPRWRFGARDIAALWRRAVELDDRPKGELGTADIVAQAAPDADTACVADAICDPGDAERYSPAGYERIVALGRELTMLRAHLGHPLPELVAEVRRVLGLDAEARAARPVAAGWAGTENLDRFSDLVSDFAGHAGASVSALLAYLDAAVEVENGLAPAELTVSHDRVQILTVHAAKGLEWQVVAVPHLSARVFPSTTQARTWLTDASDLPPLLRGDRATESEIGVPVLDTSDIYDRKILSDKISDHKKSLDQRRVDEERRLLYVAITRAEDTLLLSGHHWGATESKPRGPSEFLCELKTILEEATAAGTPCGEIEHWAPDPAPGETNPLRDQVVEALWPPVASADDHVHRGAQLVAAAMAGEVSAEADQEGWAADVDALLAERERPPQQEDTELPGQLSVSTLVELSRDPKAALTRLRRRLPQRPDPHALLGTTFHEWVQRYFHAERLFDLDDLPGAVDSDSGRAVEESLAELQDAFVKSPWAARTPVEVEVPFDMVLGETVVRGRIDAVFAEPDGTTMVLAWKTGDPPETPEAKEHAAVQLAVYRLAWAAMRGCPPESVRAAFHYVRSGQTVIPETLPGAEELVKLLAAAPTETAEEADRIT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (30-MER) x 59 NA TCATATCCTCTAATGCGAGCACTGCTATTCCCTAGCAGTGCTCGCATTAGAGGATATGA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-03-11
Deposition Author(s): De La Cruz, M.J. , Goldgur, Y. , Shuman, S. , Warren, G.M.