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9MXS
Cryo-em structure of hiv-1 reverse transcriptase p66 homodimer in complex with 5-{2-[2-(2-oxo-4-sulfanylidene-3,4-dihydropyrimidin-1(2h)-yl)ethoxy] phenoxy}naphthalene-2-carbonitrile, a non-nucleoside inhibitor, with an additional pocket of density
PDB DOI: 10.2210/pdb9mxs/pdb
Classification: VIRAL PROTEIN Organism(s): Human Immunodeficiency Virus 1
Deposited: 2025-01-20 Deposition Author(s): Anderson, K.S. , Devarkar, S.C. , Hollander, K. , Jorgensen, W.L. , Ma, S. , Tang, S. , Xiong, Y.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.09 Å
Cryo-em structure of hiv-1 reverse transcriptase p66 homodimer in complex with 5-{2-[2-(2-oxo-4-sulfanylidene-3,4-dihydropyrimidin-1(2h)-yl)ethoxy] phenoxy}naphthalene-2-carbonitrile, a non-nucleoside inhibitor, with an additional pocket of density
Anderson, K.S. , Devarkar, S.C. , Hollander, K. , Jorgensen, W.L. , Ma, S. , Tang, S. , Xiong, Y.
Primary Citation of Related Structures: 9MXS
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Reverse transcriptase/ribonuclease H | A | 563 | Human Immunodeficiency Virus 1 | MVPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGENLYFQ |
| Reverse transcriptase/ribonuclease H | B | 563 | Human Immunodeficiency Virus 1 | MVPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGENLYFQ |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-01-20 Deposition Author(s): Anderson, K.S. , Devarkar, S.C. , Hollander, K. , Jorgensen, W.L. , Ma, S. , Tang, S. , Xiong, Y.