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9MX5

Cryo-em structure of ancestral dicer helicase bound to 27-bp dsrna in internally-bound transition state

PDB DOI: 10.2210/pdb9mx5/pdb

Classification: ANTIVIRAL PROTEIN/RNA
Organism(s): Fremyella Diplosiphon , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2025-01-17
Deposition Author(s): Aderounmu, A.M. , Bass, B.L. , Consalvo, C.D. , Shen, P.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

9mx5
Literature

Cryo-em structure of ancestral dicer helicase bound to 27-bp dsrna in internally-bound transition state

Aderounmu, A.M. , Bass, B.L. , Consalvo, C.D. , Shen, P.S.

Primary Citation of Related Structures: 9MX5


Proteins
Molecule Chains Sequence Length Organism Sequence
AncD1D2 A 652 Fremyella Diplosiphon , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MDETDEDEFTPRPYQVELLERAMKKNTIVCLGTGSGKTFIAVMLIKELAHEIRGPFNEGGKRTFFLVNTVPLVNQQAKVIRKHTSLKVGEYVGDMGVDSWNKEKWNQEFEKHQVLVMTAQIFLDILNHGFISLSQVNLLIFDECHHAVKNHPYRQIMRHYKNLEQNDRPRILGLTASVINSKCKPNQVEKKIKELEATLNSRVVTASDLEEVAVQKYATKPKEIIVSYNSDRKSDTSEVIENIINQALEQLSNIEETSNLNDTNSLKQIKKVLRDIKNILDELGPWCAHRVIKSRIRQLEKRESETAEELRTIRELLQSIFEQIINVLKNLEKLQKNNSVEFVSPKVKKLLEILKQYFSNNNNSSKELCGIIFVERRYTAYVLYKLLNELSAKRDDDFSFIKCDFVVGHNSSPSSKEKSTEMNSKKQKEVLKKFRKGECNLLVATSVVEEGIDIPKCNLVVRFDLPKNFRSYVQSKGRARAKNSKYIIMVEEDEKNKFQEDLNQYQEIEKILLRLCHNRDAPSEEDFDSFEDELLPPYMPYGTDGPRVTMSSAISLLHRYCSKLPSDRFTTLTPKFTYIEQNNEEENKMFRCTLRLPINSPLREPITGQPMPSKKLAKRSAALEACKKLHEMGELDDHLLPVKISRKNAELK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (27-MER) b 27 NA AUACGUCCUGAUAGUUAGUAUCCAUCG
RNA (27-MER) c 27 NA CGAUGGAUACUAACUAUCAGGACGUAU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-01-17
Deposition Author(s): Aderounmu, A.M. , Bass, B.L. , Consalvo, C.D. , Shen, P.S.