9MVU
C6 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gb
PDB DOI: 10.2210/pdb9mvu/pdb
Classification: ANTIVIRAL PROTEIN Organism(s): Homo Sapiens , Human Herpesvirus 1 (Strain 17)
Deposited: 2025-01-16 Deposition Author(s): Abernathy, E. , Hung, M. , Lee, C.V. , Viadiu, H. , Xing, W. , Yu, X. , Yu, Y.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.2 Å
C6 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gb
Abernathy, E. , Hung, M. , Lee, C.V. , Viadiu, H. , Xing, W. , Yu, X. , Yu, Y.
Primary Citation of Related Structures: 9MVU
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Envelope glycoprotein B | A | 727 | Homo Sapiens , Human Herpesvirus 1 (Strain 17) | APAAPAAPRASGGVAATVAANGGPASRPPPVPSPATTKARKRKTKKPPKRPEATPPPDANATVAAGHATLRAHLREIKVENADANFYVCPPPTGATVVQFEQPRRCPTRPEGQNYTEGIAVVFKENIAPYKFKATMYYKDVTVSQVWFGHRYSQFMGIFEDRAPVPFEEVIDKINAKGVCRSTAKYVRNNMETTAFHRDDHETDMELKPAKVATRTSRGWHTTDLKYNPSRVEAFHRYGTTVNCIVEEVDARSVYPYDEFVLATGDFVYMSPFYGYREGSHTEHTSYAADRFKQVDGFYARDLTTKARATSPTTRNLLTTPKFTVAWDWVPKRPAVCTMTKWQEVDEMLRAEYGGSFRFSSDAISTTFTTNLTEYSLSRVDLGDCIGRDAREAIDRMFARKYNATHIKVGQPQYYLATGGFLIAYQPLLSNTLAELYVREYMREQDRKPRNATPAPLREAPSANASVERIKTTSSIEFARLQFTYNHIQRHVNDMLGRIAVAWCELQNHELTLWNEARKLNPNAIASATVGRRVSARMLGDVMAVSTCVPVAPDNVIVQNSMRVSSRPGTCYSRPLVSFRYEDQGPLIEGQLGENNELRLTRDALEPCTVGHRRYFIFGGGYVYFEEYAYSHQLSRADVTTVSTFIDLNITMLEDHEFVPLEVYTRHEIKDSGLLDYTEVQRRNQLHDLRFADIDTVIRADANAAGGGSHHHHHHHHGSDYKDDDDK |
| Envelope glycoprotein B | B | 727 | Homo Sapiens , Human Herpesvirus 1 (Strain 17) | APAAPAAPRASGGVAATVAANGGPASRPPPVPSPATTKARKRKTKKPPKRPEATPPPDANATVAAGHATLRAHLREIKVENADANFYVCPPPTGATVVQFEQPRRCPTRPEGQNYTEGIAVVFKENIAPYKFKATMYYKDVTVSQVWFGHRYSQFMGIFEDRAPVPFEEVIDKINAKGVCRSTAKYVRNNMETTAFHRDDHETDMELKPAKVATRTSRGWHTTDLKYNPSRVEAFHRYGTTVNCIVEEVDARSVYPYDEFVLATGDFVYMSPFYGYREGSHTEHTSYAADRFKQVDGFYARDLTTKARATSPTTRNLLTTPKFTVAWDWVPKRPAVCTMTKWQEVDEMLRAEYGGSFRFSSDAISTTFTTNLTEYSLSRVDLGDCIGRDAREAIDRMFARKYNATHIKVGQPQYYLATGGFLIAYQPLLSNTLAELYVREYMREQDRKPRNATPAPLREAPSANASVERIKTTSSIEFARLQFTYNHIQRHVNDMLGRIAVAWCELQNHELTLWNEARKLNPNAIASATVGRRVSARMLGDVMAVSTCVPVAPDNVIVQNSMRVSSRPGTCYSRPLVSFRYEDQGPLIEGQLGENNELRLTRDALEPCTVGHRRYFIFGGGYVYFEEYAYSHQLSRADVTTVSTFIDLNITMLEDHEFVPLEVYTRHEIKDSGLLDYTEVQRRNQLHDLRFADIDTVIRADANAAGGGSHHHHHHHHGSDYKDDDDK |
| Envelope glycoprotein B | C | 727 | Homo Sapiens , Human Herpesvirus 1 (Strain 17) | APAAPAAPRASGGVAATVAANGGPASRPPPVPSPATTKARKRKTKKPPKRPEATPPPDANATVAAGHATLRAHLREIKVENADANFYVCPPPTGATVVQFEQPRRCPTRPEGQNYTEGIAVVFKENIAPYKFKATMYYKDVTVSQVWFGHRYSQFMGIFEDRAPVPFEEVIDKINAKGVCRSTAKYVRNNMETTAFHRDDHETDMELKPAKVATRTSRGWHTTDLKYNPSRVEAFHRYGTTVNCIVEEVDARSVYPYDEFVLATGDFVYMSPFYGYREGSHTEHTSYAADRFKQVDGFYARDLTTKARATSPTTRNLLTTPKFTVAWDWVPKRPAVCTMTKWQEVDEMLRAEYGGSFRFSSDAISTTFTTNLTEYSLSRVDLGDCIGRDAREAIDRMFARKYNATHIKVGQPQYYLATGGFLIAYQPLLSNTLAELYVREYMREQDRKPRNATPAPLREAPSANASVERIKTTSSIEFARLQFTYNHIQRHVNDMLGRIAVAWCELQNHELTLWNEARKLNPNAIASATVGRRVSARMLGDVMAVSTCVPVAPDNVIVQNSMRVSSRPGTCYSRPLVSFRYEDQGPLIEGQLGENNELRLTRDALEPCTVGHRRYFIFGGGYVYFEEYAYSHQLSRADVTTVSTFIDLNITMLEDHEFVPLEVYTRHEIKDSGLLDYTEVQRRNQLHDLRFADIDTVIRADANAAGGGSHHHHHHHHGSDYKDDDDK |
| C6 Neutralizing Nanobody | D | 131 | Homo Sapiens , Human Herpesvirus 1 (Strain 17) | EVQLVESGGGLVQPGGSLRLSCAASGVTFGSNRMGWFRQAPGKGREFVATHSTYFNPARTNYADSVKGRFTISRDNAGNSVYLQMNSLRAEDTAVYYCLFDRRLGTVVTGPEGYWGQGTQVTVSSHHHHHH |
| C6 Neutralizing Nanobody | E | 131 | Homo Sapiens , Human Herpesvirus 1 (Strain 17) | EVQLVESGGGLVQPGGSLRLSCAASGVTFGSNRMGWFRQAPGKGREFVATHSTYFNPARTNYADSVKGRFTISRDNAGNSVYLQMNSLRAEDTAVYYCLFDRRLGTVVTGPEGYWGQGTQVTVSSHHHHHH |
| C6 Neutralizing Nanobody | F | 131 | Homo Sapiens , Human Herpesvirus 1 (Strain 17) | EVQLVESGGGLVQPGGSLRLSCAASGVTFGSNRMGWFRQAPGKGREFVATHSTYFNPARTNYADSVKGRFTISRDNAGNSVYLQMNSLRAEDTAVYYCLFDRRLGTVVTGPEGYWGQGTQVTVSSHHHHHH |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-01-16 Deposition Author(s): Abernathy, E. , Hung, M. , Lee, C.V. , Viadiu, H. , Xing, W. , Yu, X. , Yu, Y.