9MU4
Structure of a native drosophila melanogaster octameric nucleosome
PDB DOI: 10.2210/pdb9mu4/pdb
Classification: GENE REGULATION Organism(s): Drosophila Melanogaster
Deposited: 2025-01-13 Deposition Author(s): Anand, G. , Armache, J.-P. , Babitzke, P. , Dollinger, R. , Gilmour, D.S. , Murakami, K. , Schultz, J. , Venette-Smith, N.L. , Venkatakrishnan, V. , Vishwakarma, R.K.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.29 Å
Structure of a native drosophila melanogaster octameric nucleosome
Anand, G. , Armache, J.-P. , Babitzke, P. , Dollinger, R. , Gilmour, D.S. , Murakami, K. , Schultz, J. , Venette-Smith, N.L. , Venkatakrishnan, V. , Vishwakarma, R.K.
Primary Citation of Related Structures: 9MU4
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Histone H2A | C | 106 | Drosophila Melanogaster | AKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK |
| Histone H2A | G | 106 | Drosophila Melanogaster | AKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK |
| Histone H2B | D | 97 | Drosophila Melanogaster | KKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK |
| Histone H2B | H | 97 | Drosophila Melanogaster | KKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK |
| Histone H3 | A | 100 | Drosophila Melanogaster | KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
| Histone H3 | E | 100 | Drosophila Melanogaster | KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
| Histone H4 | B | 82 | Drosophila Melanogaster | VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
| Histone H4 | F | 82 | Drosophila Melanogaster | VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (164-MER) | t | 164 | NA | TATATATATATATATATCAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCGATATAT |
| DNA (164-MER) | n | 164 | NA | ATATATCGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTGATATATATATATATATA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-01-13 Deposition Author(s): Anand, G. , Armache, J.-P. , Babitzke, P. , Dollinger, R. , Gilmour, D.S. , Murakami, K. , Schultz, J. , Venette-Smith, N.L. , Venkatakrishnan, V. , Vishwakarma, R.K.