Rm017 fab in complex with apex-gt6.2 trimer and rm20a3 fab
PDB DOI: 10.2210/pdb9mqg/pdb
Classification: IMMUNE SYSTEM Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta
Deposited: 2025-01-03 Deposition Author(s): Ozorowski, G. , Pratap, P.P. , Ward, A.B.
Rm017 fab in complex with apex-gt6.2 trimer and rm20a3 fab
Ozorowski, G. , Pratap, P.P. , Ward, A.B.
Primary Citation of Related Structures: 9MQG
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
RM017 Fab heavy chain | H | 235 | Human Immunodeficiency Virus 1 , Macaca Mulatta | DVQLVESGGGLVKPGGSLRLSCVASGFTFSSYLMHWVRQAPGKGLEWVSVISESGGNIYYSDSVKGRFTISRDNAKNSLFLQMNSLRAEDTAVYYCTRGGLFHIDYDDDYAYYYTGRGLDYWGQGVLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
RM017 Fab light chain | L | 220 | Human Immunodeficiency Virus 1 , Macaca Mulatta | DIVMTQTPLSLPVTPGEPASISCRSSQSLLNSEDGNTYLDWYLQKPGQSPQLLIYEVSNRASGVPDRFSGSGSDTDFTLEISRVEAEDVGVYYCMKALEFPFTFGPGTKLDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
RM20A3 Fab light chain | G | 128 | Human Immunodeficiency Virus 1 , Macaca Mulatta | ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL |
RM20A3 Fab light chain | J | 128 | Human Immunodeficiency Virus 1 , Macaca Mulatta | ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL |
RM20A3 Fab light chain | N | 128 | Human Immunodeficiency Virus 1 , Macaca Mulatta | ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL |
RM20A3 Fab heavy chain | I | 125 | Human Immunodeficiency Virus 1 , Macaca Mulatta | EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS |
RM20A3 Fab heavy chain | K | 125 | Human Immunodeficiency Virus 1 , Macaca Mulatta | EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS |
RM20A3 Fab heavy chain | M | 125 | Human Immunodeficiency Virus 1 , Macaca Mulatta | EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS |
Envelope glycoprotein gp120 | A | 473 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVSTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGLQCTNVTNNITDDMRGELKNCSFNATTELRNKRQKVYSLFYRLDIVPMVDLWTNYRLISCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTSVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
Envelope glycoprotein gp120 | C | 473 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVSTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGLQCTNVTNNITDDMRGELKNCSFNATTELRNKRQKVYSLFYRLDIVPMVDLWTNYRLISCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTSVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
Envelope glycoprotein gp120 | D | 473 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVSTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGLQCTNVTNNITDDMRGELKNCSFNATTELRNKRQKVYSLFYRLDIVPMVDLWTNYRLISCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTSVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
Transmembrane protein gp41 | B | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
Transmembrane protein gp41 | E | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
Transmembrane protein gp41 | F | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-01-03 Deposition Author(s): Ozorowski, G. , Pratap, P.P. , Ward, A.B.