PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9MMW

Crispr-associated deaminase cad1 in ca4 bound in hexamer form refined against the consensus map

PDB DOI: 10.2210/pdb9mmw/pdb

Classification: ANTIVIRAL PROTEIN/RNA
Organism(s): Thermoanaerobaculum Aquaticum , Synthetic Construct

Deposited: 2024-12-20
Deposition Author(s): Li, H. , Whyms, C. , Zhao, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.36 Å

9mmw
Literature

Crispr-associated deaminase cad1 in ca4 bound in hexamer form refined against the consensus map

Li, H. , Whyms, C. , Zhao, Y.

Primary Citation of Related Structures: 9MMW


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated ring nuclease and adenosine deaminase, subunit A E 625 Thermoanaerobaculum Aquaticum , Synthetic Construct MRILLCSVGTSWAVVPEAMQLLGSQGFDEVHVLTTASSKISPGVEQLLRYFEMHPGPRFSISRVQDFEDLRSEQDHMLFEEVLWRWLLQRAPQAAHRYICLAGGYKTISAAMQRAAALFGACEVFHVLCEPRFGPQGNREASTLEEVEQAIATNALRFVRLGPEPGWPQLRLLSAPSFPLESTLQGPVHWVRASDMRLRQHVEGVLERSRHILAAWEGISELPIPALAAWPPSHLRWLHEPLDPVQDKAWVQALPKVELHCHLGGFATHGELLHKVRQEAANPESLPPVRAIPLPPGWPIPEEPIGLERYMRLGDNNGSALLKDPGCLRAQCRLLYEALLADHVAYAEIRCSPANYASASRSPWVVLQEIRNHFQQAMEETPEDRRCHVNLLLTATREEGGDRSRIARHLALAITAAEHWKNGCRVVGVDLAGFEDRTTRAAMFATDFEPVHRVGLAVTVHAGENDDVEGIWQAVFKLSARRLGHALHLSRSPDLLRVVAERGIAVELCPYANLQIKGFPLDEEQEGSETYPLRGYLAAGVAVTLNTDNLGISQASLTDNLLLTARLCPGITRLEVLKTQVFAAQAAFANQAERKALWARLAQVPVPTDTEQKNGNDAKASHQPR
CRISPR-associated ring nuclease and adenosine deaminase, subunit A F 625 Thermoanaerobaculum Aquaticum , Synthetic Construct MRILLCSVGTSWAVVPEAMQLLGSQGFDEVHVLTTASSKISPGVEQLLRYFEMHPGPRFSISRVQDFEDLRSEQDHMLFEEVLWRWLLQRAPQAAHRYICLAGGYKTISAAMQRAAALFGACEVFHVLCEPRFGPQGNREASTLEEVEQAIATNALRFVRLGPEPGWPQLRLLSAPSFPLESTLQGPVHWVRASDMRLRQHVEGVLERSRHILAAWEGISELPIPALAAWPPSHLRWLHEPLDPVQDKAWVQALPKVELHCHLGGFATHGELLHKVRQEAANPESLPPVRAIPLPPGWPIPEEPIGLERYMRLGDNNGSALLKDPGCLRAQCRLLYEALLADHVAYAEIRCSPANYASASRSPWVVLQEIRNHFQQAMEETPEDRRCHVNLLLTATREEGGDRSRIARHLALAITAAEHWKNGCRVVGVDLAGFEDRTTRAAMFATDFEPVHRVGLAVTVHAGENDDVEGIWQAVFKLSARRLGHALHLSRSPDLLRVVAERGIAVELCPYANLQIKGFPLDEEQEGSETYPLRGYLAAGVAVTLNTDNLGISQASLTDNLLLTARLCPGITRLEVLKTQVFAAQAAFANQAERKALWARLAQVPVPTDTEQKNGNDAKASHQPR
CRISPR-associated ring nuclease and adenosine deaminase, subunit A G 625 Thermoanaerobaculum Aquaticum , Synthetic Construct MRILLCSVGTSWAVVPEAMQLLGSQGFDEVHVLTTASSKISPGVEQLLRYFEMHPGPRFSISRVQDFEDLRSEQDHMLFEEVLWRWLLQRAPQAAHRYICLAGGYKTISAAMQRAAALFGACEVFHVLCEPRFGPQGNREASTLEEVEQAIATNALRFVRLGPEPGWPQLRLLSAPSFPLESTLQGPVHWVRASDMRLRQHVEGVLERSRHILAAWEGISELPIPALAAWPPSHLRWLHEPLDPVQDKAWVQALPKVELHCHLGGFATHGELLHKVRQEAANPESLPPVRAIPLPPGWPIPEEPIGLERYMRLGDNNGSALLKDPGCLRAQCRLLYEALLADHVAYAEIRCSPANYASASRSPWVVLQEIRNHFQQAMEETPEDRRCHVNLLLTATREEGGDRSRIARHLALAITAAEHWKNGCRVVGVDLAGFEDRTTRAAMFATDFEPVHRVGLAVTVHAGENDDVEGIWQAVFKLSARRLGHALHLSRSPDLLRVVAERGIAVELCPYANLQIKGFPLDEEQEGSETYPLRGYLAAGVAVTLNTDNLGISQASLTDNLLLTARLCPGITRLEVLKTQVFAAQAAFANQAERKALWARLAQVPVPTDTEQKNGNDAKASHQPR
CRISPR-associated ring nuclease and adenosine deaminase, subunit A H 625 Thermoanaerobaculum Aquaticum , Synthetic Construct MRILLCSVGTSWAVVPEAMQLLGSQGFDEVHVLTTASSKISPGVEQLLRYFEMHPGPRFSISRVQDFEDLRSEQDHMLFEEVLWRWLLQRAPQAAHRYICLAGGYKTISAAMQRAAALFGACEVFHVLCEPRFGPQGNREASTLEEVEQAIATNALRFVRLGPEPGWPQLRLLSAPSFPLESTLQGPVHWVRASDMRLRQHVEGVLERSRHILAAWEGISELPIPALAAWPPSHLRWLHEPLDPVQDKAWVQALPKVELHCHLGGFATHGELLHKVRQEAANPESLPPVRAIPLPPGWPIPEEPIGLERYMRLGDNNGSALLKDPGCLRAQCRLLYEALLADHVAYAEIRCSPANYASASRSPWVVLQEIRNHFQQAMEETPEDRRCHVNLLLTATREEGGDRSRIARHLALAITAAEHWKNGCRVVGVDLAGFEDRTTRAAMFATDFEPVHRVGLAVTVHAGENDDVEGIWQAVFKLSARRLGHALHLSRSPDLLRVVAERGIAVELCPYANLQIKGFPLDEEQEGSETYPLRGYLAAGVAVTLNTDNLGISQASLTDNLLLTARLCPGITRLEVLKTQVFAAQAAFANQAERKALWARLAQVPVPTDTEQKNGNDAKASHQPR
CRISPR-associated ring nuclease and adenosine deaminase, subunit A A 625 Thermoanaerobaculum Aquaticum , Synthetic Construct MRILLCSVGTSWAVVPEAMQLLGSQGFDEVHVLTTASSKISPGVEQLLRYFEMHPGPRFSISRVQDFEDLRSEQDHMLFEEVLWRWLLQRAPQAAHRYICLAGGYKTISAAMQRAAALFGACEVFHVLCEPRFGPQGNREASTLEEVEQAIATNALRFVRLGPEPGWPQLRLLSAPSFPLESTLQGPVHWVRASDMRLRQHVEGVLERSRHILAAWEGISELPIPALAAWPPSHLRWLHEPLDPVQDKAWVQALPKVELHCHLGGFATHGELLHKVRQEAANPESLPPVRAIPLPPGWPIPEEPIGLERYMRLGDNNGSALLKDPGCLRAQCRLLYEALLADHVAYAEIRCSPANYASASRSPWVVLQEIRNHFQQAMEETPEDRRCHVNLLLTATREEGGDRSRIARHLALAITAAEHWKNGCRVVGVDLAGFEDRTTRAAMFATDFEPVHRVGLAVTVHAGENDDVEGIWQAVFKLSARRLGHALHLSRSPDLLRVVAERGIAVELCPYANLQIKGFPLDEEQEGSETYPLRGYLAAGVAVTLNTDNLGISQASLTDNLLLTARLCPGITRLEVLKTQVFAAQAAFANQAERKALWARLAQVPVPTDTEQKNGNDAKASHQPR
CRISPR-associated ring nuclease and adenosine deaminase, subunit A B 625 Thermoanaerobaculum Aquaticum , Synthetic Construct MRILLCSVGTSWAVVPEAMQLLGSQGFDEVHVLTTASSKISPGVEQLLRYFEMHPGPRFSISRVQDFEDLRSEQDHMLFEEVLWRWLLQRAPQAAHRYICLAGGYKTISAAMQRAAALFGACEVFHVLCEPRFGPQGNREASTLEEVEQAIATNALRFVRLGPEPGWPQLRLLSAPSFPLESTLQGPVHWVRASDMRLRQHVEGVLERSRHILAAWEGISELPIPALAAWPPSHLRWLHEPLDPVQDKAWVQALPKVELHCHLGGFATHGELLHKVRQEAANPESLPPVRAIPLPPGWPIPEEPIGLERYMRLGDNNGSALLKDPGCLRAQCRLLYEALLADHVAYAEIRCSPANYASASRSPWVVLQEIRNHFQQAMEETPEDRRCHVNLLLTATREEGGDRSRIARHLALAITAAEHWKNGCRVVGVDLAGFEDRTTRAAMFATDFEPVHRVGLAVTVHAGENDDVEGIWQAVFKLSARRLGHALHLSRSPDLLRVVAERGIAVELCPYANLQIKGFPLDEEQEGSETYPLRGYLAAGVAVTLNTDNLGISQASLTDNLLLTARLCPGITRLEVLKTQVFAAQAAFANQAERKALWARLAQVPVPTDTEQKNGNDAKASHQPR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*AP*(A23))-3') q 2 NA AA
RNA (5'-R(*AP*(A23))-3') d 2 NA AA
RNA (5'-R(*AP*(A23))-3') t 2 NA AA
RNA (5'-R(*AP*(A23))-3') i 2 NA AA
RNA (5'-R(*AP*(A23))-3') c 2 NA AA
RNA (5'-R(*AP*(A23))-3') j 2 NA AA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-12-20
Deposition Author(s): Li, H. , Whyms, C. , Zhao, Y.