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FASTA Sequence PDB Format mmCIF Format
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9MKN

Structure of the respiratory syncytial virus fusion protein bound to human antibodies rsv_2245 and rsv_3301

PDB DOI: 10.2210/pdb9mkn/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Respiratory Syncytial Virus

Deposited: 2024-12-17
Deposition Author(s): Johnson, N.V. , Mclellan, J.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

9mkn
Literature

Structure of the respiratory syncytial virus fusion protein bound to human antibodies rsv_2245 and rsv_3301

Johnson, N.V. , Mclellan, J.S.

Primary Citation of Related Structures: 9MKN


Proteins
Molecule Chains Sequence Length Organism Sequence
Fusion glycoprotein F2 A 70 Homo Sapiens , Respiratory Syncytial Virus NITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKEIKCNGTDAKVKLIKQELDKYKNAVTELQLL
Fusion glycoprotein F2 C 70 Homo Sapiens , Respiratory Syncytial Virus NITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKEIKCNGTDAKVKLIKQELDKYKNAVTELQLL
Fusion glycoprotein F2 E 70 Homo Sapiens , Respiratory Syncytial Virus NITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKEIKCNGTDAKVKLIKQELDKYKNAVTELQLL
Fusion glycoprotein F1 B 370 Homo Sapiens , Respiratory Syncytial Virus FLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSIPNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFI
Fusion glycoprotein F1 D 370 Homo Sapiens , Respiratory Syncytial Virus FLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSIPNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFI
Fusion glycoprotein F1 F 370 Homo Sapiens , Respiratory Syncytial Virus FLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSIPNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFI
2245 Fab Heavy Chain H 226 Homo Sapiens , Respiratory Syncytial Virus QVQLVQSGAEVKKPGASVKVSCKASGYSFSSFGVSWVRQAPGQGLEWLGWISAYNGNTDYAQKVQGRLTMTTDTSTNTAYMELRNLRSDDTAVYYCARDPPASAAAMFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
2245 Fab Heavy Chain I 226 Homo Sapiens , Respiratory Syncytial Virus QVQLVQSGAEVKKPGASVKVSCKASGYSFSSFGVSWVRQAPGQGLEWLGWISAYNGNTDYAQKVQGRLTMTTDTSTNTAYMELRNLRSDDTAVYYCARDPPASAAAMFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
2245 Fab Heavy Chain J 226 Homo Sapiens , Respiratory Syncytial Virus QVQLVQSGAEVKKPGASVKVSCKASGYSFSSFGVSWVRQAPGQGLEWLGWISAYNGNTDYAQKVQGRLTMTTDTSTNTAYMELRNLRSDDTAVYYCARDPPASAAAMFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
2245 Fab Light Chain L 219 Homo Sapiens , Respiratory Syncytial Virus DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGDTYLSWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPPAFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
2245 Fab Light Chain M 219 Homo Sapiens , Respiratory Syncytial Virus DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGDTYLSWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPPAFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
2245 Fab Light Chain N 219 Homo Sapiens , Respiratory Syncytial Virus DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGDTYLSWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPPAFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3301 Fab Heavy Chain O 231 Homo Sapiens , Respiratory Syncytial Virus QVQLVESGPTLVKPTQTLTLTCSFSGFSLSTRGVGVGWVRQPPGKALECLGFTYWDGDEYYSPSLRNRVTISKDTSKNQVVLTLTNMDPVDTATYFCVHSDLYDRGGYYLYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
3301 Fab Heavy Chain Q 231 Homo Sapiens , Respiratory Syncytial Virus QVQLVESGPTLVKPTQTLTLTCSFSGFSLSTRGVGVGWVRQPPGKALECLGFTYWDGDEYYSPSLRNRVTISKDTSKNQVVLTLTNMDPVDTATYFCVHSDLYDRGGYYLYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
3301 Fab Heavy Chain S 231 Homo Sapiens , Respiratory Syncytial Virus QVQLVESGPTLVKPTQTLTLTCSFSGFSLSTRGVGVGWVRQPPGKALECLGFTYWDGDEYYSPSLRNRVTISKDTSKNQVVLTLTNMDPVDTATYFCVHSDLYDRGGYYLYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
3301 Fab Light Chain P 214 Homo Sapiens , Respiratory Syncytial Virus DIRVTQSPSSLSASVGDRVTITCRASQTIASYVNWYQQKPGRAPELLIYAASILQSGVPSRFSGRGSGTDFTLTINGLQPEDFATYYCQQSYSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3301 Fab Light Chain R 214 Homo Sapiens , Respiratory Syncytial Virus DIRVTQSPSSLSASVGDRVTITCRASQTIASYVNWYQQKPGRAPELLIYAASILQSGVPSRFSGRGSGTDFTLTINGLQPEDFATYYCQQSYSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3301 Fab Light Chain T 214 Homo Sapiens , Respiratory Syncytial Virus DIRVTQSPSSLSASVGDRVTITCRASQTIASYVNWYQQKPGRAPELLIYAASILQSGVPSRFSGRGSGTDFTLTINGLQPEDFATYYCQQSYSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-12-17
Deposition Author(s): Johnson, N.V. , Mclellan, J.S.