9MIA
206-3g08 fab in complex with hiv-1 gt1.1 v4.1 sosip env trimer and rm20a3 fab
PDB DOI: 10.2210/pdb9mia/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta
Deposited: 2024-12-12 Deposition Author(s): Ozorowski, G. , Phulera, S. , Ward, A.B.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.8 Å
206-3g08 fab in complex with hiv-1 gt1.1 v4.1 sosip env trimer and rm20a3 fab
Ozorowski, G. , Phulera, S. , Ward, A.B.
Primary Citation of Related Structures: 9MIA
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RM20A3 heavy chain Fv | G | 125 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS |
| RM20A3 heavy chain Fv | J | 125 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS |
| RM20A3 heavy chain Fv | O | 125 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS |
| 206-3G08 heavy chain Fv | H | 121 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGHYMHWVRQAPGQGLEWMGWINPYSSGTNYAQNFQGRVTMTRDTSITTAYMELSRLRSDDTAVYYCARAPDYGDRWDFDYWGQGTLVTVSS |
| 206-3G08 heavy chain Fv | K | 121 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGHYMHWVRQAPGQGLEWMGWINPYSSGTNYAQNFQGRVTMTRDTSITTAYMELSRLRSDDTAVYYCARAPDYGDRWDFDYWGQGTLVTVSS |
| 206-3G08 heavy chain Fv | P | 121 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGHYMHWVRQAPGQGLEWMGWINPYSSGTNYAQNFQGRVTMTRDTSITTAYMELSRLRSDDTAVYYCARAPDYGDRWDFDYWGQGTLVTVSS |
| RM20A3 light chain Fv | I | 128 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL |
| RM20A3 light chain Fv | M | 128 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL |
| RM20A3 light chain Fv | Q | 128 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL |
| 206-3G08 lambda chain Fv | L | 105 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKVIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQADDEADYYCSSYEVFGTGTKVTVL |
| 206-3G08 lambda chain Fv | N | 105 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKVIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQADDEADYYCSSYEVFGTGTKVTVL |
| 206-3G08 lambda chain Fv | R | 105 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKVIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQADDEADYYCSSYEVFGTGTKVTVL |
| GT1.1 v4.1 SOSIP gp120 | A | 509 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKRQKVHALFYKLDIVPINENQNTSYRLINCNTAAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSKDIRNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCDTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTDSTTETFRPSGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
| GT1.1 v4.1 SOSIP gp120 | C | 509 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKRQKVHALFYKLDIVPINENQNTSYRLINCNTAAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSKDIRNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCDTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTDSTTETFRPSGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
| GT1.1 v4.1 SOSIP gp120 | E | 509 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKRQKVHALFYKLDIVPINENQNTSYRLINCNTAAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSKDIRNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCDTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTDSTTETFRPSGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
| Envelope glycoprotein gp160 | B | 153 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| Envelope glycoprotein gp160 | D | 153 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| Envelope glycoprotein gp160 | F | 153 | Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-12-12 Deposition Author(s): Ozorowski, G. , Phulera, S. , Ward, A.B.