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9MB0

Cryo-em structure of dengue virus serotype2 thsti/trc/01 strain bound with j9 fab

PDB DOI: 10.2210/pdb9mb0/pdb

Classification: VIRUS
Organism(s): Dengue Virus Type 2 , Homo Sapiens

Deposited: 2025-03-14
Deposition Author(s): Prasad, V.M. , Roy, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 7.21 Å

Literature

Cryo-em structure of dengue virus serotype2 thsti/trc/01 strain bound with j9 fab

Prasad, V.M. , Roy, A.

Primary Citation of Related Structures: 9MB0


Proteins
Molecule Chains Sequence Length Organism Sequence
Membrane glycoprotein B 75 Dengue Virus Type 2 , Homo Sapiens SVALVPHVGMGLETRTETWMSSEGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTYFQRVLIFILLTAVAPSMT
Membrane glycoprotein D 75 Dengue Virus Type 2 , Homo Sapiens SVALVPHVGMGLETRTETWMSSEGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTYFQRVLIFILLTAVAPSMT
Membrane glycoprotein F 75 Dengue Virus Type 2 , Homo Sapiens SVALVPHVGMGLETRTETWMSSEGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTYFQRVLIFILLTAVAPSMT
Envelope Glycoprotein A 495 Dengue Virus Type 2 , Homo Sapiens MRCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPTLDFELIKTEAKQPATLRKYCIEAKLTNTTTASRCPTQGEPSLNEEQDKRFVCKHSMVDRGWGNGCGLFGKGGIVTCAMFTCKKNMEGKIVQPENLEYTIVITPHSGEENAVGNDTGKHGKEVKVTPQSSITEAELTGYGTVTMECSPRTGLDFNEMVLLQMENKAWLVHRQWFLDLPLPWLPGADTQGSNWIQKETLVTFKNPHAKKQDVVVLGSQEGAMHTALTGATEIQMSSGNLLFTGHLKCRLRMDKLQLKGMSYSMCTGKFKVVKEIAETQHGTIVIRVQYEGDGSPCKIPFEIMDLEKRHVLGRLITVNPIVTEKDSPVNIEAEPPFGDSYIIIGVEPGQLKLSWFKKGSSIGQMFETTMRGAKRMAILGDTAWDFGSLGGVFTSIGKALHQVFGAIYGAAFSGVSWTMKILIGVVITWIGMNSRSTSLSVSLVLVGVVTLYLGVMVQA
Envelope Glycoprotein C 495 Dengue Virus Type 2 , Homo Sapiens MRCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPTLDFELIKTEAKQPATLRKYCIEAKLTNTTTASRCPTQGEPSLNEEQDKRFVCKHSMVDRGWGNGCGLFGKGGIVTCAMFTCKKNMEGKIVQPENLEYTIVITPHSGEENAVGNDTGKHGKEVKVTPQSSITEAELTGYGTVTMECSPRTGLDFNEMVLLQMENKAWLVHRQWFLDLPLPWLPGADTQGSNWIQKETLVTFKNPHAKKQDVVVLGSQEGAMHTALTGATEIQMSSGNLLFTGHLKCRLRMDKLQLKGMSYSMCTGKFKVVKEIAETQHGTIVIRVQYEGDGSPCKIPFEIMDLEKRHVLGRLITVNPIVTEKDSPVNIEAEPPFGDSYIIIGVEPGQLKLSWFKKGSSIGQMFETTMRGAKRMAILGDTAWDFGSLGGVFTSIGKALHQVFGAIYGAAFSGVSWTMKILIGVVITWIGMNSRSTSLSVSLVLVGVVTLYLGVMVQA
Envelope Glycoprotein E 495 Dengue Virus Type 2 , Homo Sapiens MRCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPTLDFELIKTEAKQPATLRKYCIEAKLTNTTTASRCPTQGEPSLNEEQDKRFVCKHSMVDRGWGNGCGLFGKGGIVTCAMFTCKKNMEGKIVQPENLEYTIVITPHSGEENAVGNDTGKHGKEVKVTPQSSITEAELTGYGTVTMECSPRTGLDFNEMVLLQMENKAWLVHRQWFLDLPLPWLPGADTQGSNWIQKETLVTFKNPHAKKQDVVVLGSQEGAMHTALTGATEIQMSSGNLLFTGHLKCRLRMDKLQLKGMSYSMCTGKFKVVKEIAETQHGTIVIRVQYEGDGSPCKIPFEIMDLEKRHVLGRLITVNPIVTEKDSPVNIEAEPPFGDSYIIIGVEPGQLKLSWFKKGSSIGQMFETTMRGAKRMAILGDTAWDFGSLGGVFTSIGKALHQVFGAIYGAAFSGVSWTMKILIGVVITWIGMNSRSTSLSVSLVLVGVVTLYLGVMVQA
J9 heavy chain variable region H 116 Dengue Virus Type 2 , Homo Sapiens AEVRKPGSSVKVSCKTSGGSLNSYGISWVRQAPGGQGLEWMGGIIPFFGTVIYSDNYQGRASFSSDESTTTAYMELRSLRSEDTAVYYCARYCYSASCYHNWFDPWGQGTLVTVST
J9 heavy chain variable region K 116 Dengue Virus Type 2 , Homo Sapiens AEVRKPGSSVKVSCKTSGGSLNSYGISWVRQAPGGQGLEWMGGIIPFFGTVIYSDNYQGRASFSSDESTTTAYMELRSLRSEDTAVYYCARYCYSASCYHNWFDPWGQGTLVTVST
J9 Light chain variable region L 105 Dengue Virus Type 2 , Homo Sapiens VLTQSPATLSLSPGERATLSCRASQSVGSSLAWYQQKPGQAPRLLIYDASKRASGFPARFSGSGSGTDFTLTISSLEPGDFAVYYCQQRSSWPPYMYTFGQGTKL
J9 Light chain variable region M 105 Dengue Virus Type 2 , Homo Sapiens VLTQSPATLSLSPGERATLSCRASQSVGSSLAWYQQKPGQAPRLLIYDASKRASGFPARFSGSGSGTDFTLTISSLEPGDFAVYYCQQRSSWPPYMYTFGQGTKL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-03-14
Deposition Author(s): Prasad, V.M. , Roy, A.