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9M5U

Cryo-em structure of arabidopsis thaliana met1 (aa:621-1534) in complex with hemimethylated dna analog

PDB DOI: 10.2210/pdb9m5u/pdb

Classification: STRUCTURAL PROTEIN/DNA
Organism(s): Arabidopsis Thaliana , Synthetic Construct

Deposited: 2025-03-06
Deposition Author(s): Arita, K. , Kikuchi, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.74 Å

9m5u
Literature

Cryo-em structure of arabidopsis thaliana met1 (aa:621-1534) in complex with hemimethylated dna analog

Arita, K. , Kikuchi, A.

Primary Citation of Related Structures: 9M5U


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA (cytosine-5)-methyltransferase 1 A 919 Arabidopsis Thaliana , Synthetic Construct GPLGSKRKAMQATTTRLVNRIWGEFYSNYSPEDPLQATAAENGEDEVEEEGGNGEEEVEEEGENGLTEDTVPEPVEVQKPHTPKKIRGSSGKREIKWDGESLGKTSAGEPLYQQALVGGEMVAVGGAVTLEVDDPDEMPAIYFVEYMFESTDHCKMLHGRFLQRGSMTVLGNAANERELFLTNECMTTQLKDIKGVASFEIRSRPWGHQYRKKNITADKLDWARALERKVKDLPTEYYCKSLYSPERGGFFSLPLSDIGRSSGFCTSCKIREDEEKRSTIKLNVSKTGFFINGIEYSVEDFVYVNPDSIGGLKEGSKTSFKSGRNIGLRAYVVCQLLEIVPKESRKADLGSFDVKVRRFYRPEDVSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLSREYPISDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEPPKEIRLATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAIMEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQSSWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIRGNTIALTDHICKAMNELNLIRCKLIPTRPGADWHDLPKRKVTLSDGRVEEMIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFALGRKLKEALHLKKSPQHQP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*CP*TP*TP*AP*(5CM)P*GP*GP*AP*AP*GP*G)-3') c 12 NA ACTTACGGAAGG
DNA (5'-D(*CP*CP*TP*TP*CP*(A1L82)P*GP*TP*AP*AP*GP*T)-3') d 12 NA CCTTCXGTAAGT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-03-06
Deposition Author(s): Arita, K. , Kikuchi, A.