Cryo-em structure of the nipah g head domain in complex with three fabs
PDB DOI: 10.2210/pdb9lue/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Henipavirus Nipahense , Mesocricetus Auratus
Deposited: 2025-02-08 Deposition Author(s): Deng, Z. , Wang, Y. , Zhao, H.
Method: ELECTRON MICROSCOPY Resolution: 3.03 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Glycoprotein G | G | 426 | Henipavirus Nipahense , Mesocricetus Auratus | GVSNLVGLPNNICLQKTSNQILKPKLISYTLPVVGQSGTCITDPLLAMDEGYFAYSHLERIGSCSRGVSKQRIIGVGEVLDRGDEVPSLFMTNVWTPPNPNTVYHCSAVYNNEFYYVLCAVSTVGDPILNSTYWSGSLMMTRLAVKPKSNGGGYNQHQLALRSIEKGRYDKVMPYGPSGIKQGDTLYFPAVGFLVRTEFKYNDSNCPITKCQYSKPENCRLSMGIRPNSHYILRSGLLKYNLSDGENPKVVFIEISDQRLSIGSPSKIYDSLGQPVFYQASFSWDTMIKFGDVLTVNPLVVNWRNNTVISRPGQSQCPRFNTCPEICWEGVYNDAFLIDRINWISAGVFLDSNQTAENPVFTVFKDNEILYRAQLASEDTNAQKTITNCFLLKNKIWCISLVEIYDTGDNVIRPKLFAVKIPEQCT |
| NIV LN3D3 Fab Light Chain | L | 107 | Henipavirus Nipahense , Mesocricetus Auratus | EIQMTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINNLETEDFGMYFCQHSDSWPFTFGSGTKLEIK |
| NiV S2B10 Fab Heavy Chain | A | 119 | Henipavirus Nipahense , Mesocricetus Auratus | QMQLQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPRNKLEWMGFITYSGSTSYNPSLKSRISLTRDTSKNQFFLQLSSVTTEDTATYYCARSGANWDWFAYWGQGTLVTVSA |
| NiV S2B10 Fab Light Chain | B | 111 | Henipavirus Nipahense , Mesocricetus Auratus | DIQMTQSPASLAVSLGQRATISCRASESVDNYGNSFMHWYQQKPGQPPKLLIYRASKLESGIPARFSGSGSRTDFTLTINPVEADDVATYHCQQSNEDPWTFGGGTKLEIK |
| NiV S1E2 Fab Heavy Chain | C | 120 | Henipavirus Nipahense , Mesocricetus Auratus | QMQLQESGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFSGNKLEWMGYINHDGSKNYNPSLKNRISITRDTSKNQFFLKLNSVTTEDTATYYCARDYGSYYYPMDYWGQGTSVTVSS |
| NiV S1E2 Fab Light Chain | D | 106 | Henipavirus Nipahense , Mesocricetus Auratus | EIVLTQSPPIMSASPGEKVTITCSASSSVTFMHWFQQKPGTSPKLWIFSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPFTFGSGTKLEIK |
| NIV LN3D3 Fab Heavy Chain | H | 119 | Henipavirus Nipahense , Mesocricetus Auratus | EVKLEESGPELVKPGASVKMSCKASGYTFTNYVMHWVKQKPGQGLEWIGYVNPYNDGTQYNEKFRDKATLTSDKSSSTVYMELNSLTSEDSAVYYCTRGDYPYWVFEVWGAGTTVTVSS |
Method: ELECTRON MICROSCOPY