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9LTS

Cryo-em structure of the dinoroseobacter shibae rc-lh1 supercomplex

PDB DOI: 10.2210/pdb9lts/pdb

Classification: PHOTOSYNTHESIS
Organism(s): Dinoroseobacter Shibae Dfl 12 = Dsm 16493

Deposited: 2025-02-06
Deposition Author(s): Liu, L.N. , Liu, Z.K. , Wang, P.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.49 Å

9lts
Literature

Cryo-em structure of the dinoroseobacter shibae rc-lh1 supercomplex

Liu, L.N. , Liu, Z.K. , Wang, P.

Primary Citation of Related Structures: 9LTS


Proteins
Molecule Chains Sequence Length Organism Sequence
Antenna pigment protein alpha chain A 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain 1 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain 5 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain 3 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain W 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain U 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain S 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain Q 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain O 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Reaction center protein M chain M 325 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 PEYQNIFTQVQVQGPAELGVDNENNLTEERTTGTGFSQLIGWIGNAQLGPIYLGWFGIISLVTGTLWFNIVGFNMLSQVGYSIPEFIRQLFWLALEPPSPEYGLRMPPLDDGGWFIIASFFLLVSVISWWLRTYQLAEMHKMGKHVAWAFAAAIWLFLVLGLFRPILMGSWSEAVPYGIFPHLDWTTAFSIRYGNLYYNPFHALSIVFLYGSVLLFAMHGATILAVTRFGGDRELEQIYDRGTASERAGLFWRWTMGFNATMEGIHRWAWWFAVLTPITGGIGILLTGTVVDNWFLWAVEHNFAPDYTQDYGYEAYTTYDGFLGR
Antenna pigment protein alpha chain K 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain G 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain E 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Photosynthetic reaction center cytochrome c subunit C 357 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 KWFDEWNSKNPTDIYKPAIVVGVAGGAVFAAALLVSMGQPLATDSMQTGPRGTGMSVPEFVSDLDTPDPTIEVFLASTSDPVIPEEGAQTAGEAYENVDPVLADLTVENYDRLLAAMRSWTGIPDLLEDPDHYQSKVAINMIQMNQTINEEWAGHVYANAEVGVTCFTCHRGQAVPSEVWYRIDPVTENTSGWASVQNRATSLSQFTSLPSDALYQYLLNYEQIAVHDLESRVETLPGDPTWQNTERTYSLMNYFSNSLGRNCVFCHNSRAFYDPAQHTPQWATAMLGISMVQELNNEWIVPIGEAHLPPERLGPVYNDVPKLACKTCHKGYQQPLQGLNVVADWPELATTEGPFYD
Antenna pigment protein alpha chain I 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain 7 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein alpha chain 9 51 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 MSKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVLLSTEHFNWFELAAANA
Antenna pigment protein beta chain 2 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain 6 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain 4 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain X 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain V 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain T 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain R 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain P 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain N 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Reaction center protein L chain L 273 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 ALLSFERKYRVRGGTLIGGDLFDFWVGPFYVGFFGVTTAFFALLGTILIFWGASQQGTFNPWLINIAPPDLSYGLGMAPLMEGGLWQIITICAIGAFVSWALREVEICRKLGMGYHVPFAFSVAIFAYVTLVVFRPLLMGAWGHGFPYGIWSHLDWVSNTGYAYLHFHYNPAHMLAVTFFFTTTLALALHGALVLSAANPPKGEEVKGPDNEDTFFRDFIGYSIGTLGIHRVGLLLALNAGFWSAVCIIISGPVWTKGWPEWWNWWLEMPIWP
Reaction center protein H chain H 255 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 EETFFGNFDLASLSLWLFYGFFALLIYYLQTENMREGYPLEDEDGNTAANQGPFPLPKEKTFKLQHGRGELTLPGEDVQRRDNLALRKTAHGNGFPMEPTGDPMLDGVGPASWSKRRDVPELDAHGHPKIVPMSAAEGFGVSAGTDPRGLPVMAGDGEIVGLVSDMWIDEAEQLVRYLELELDPEWGDGKRLVQRQMVRIKSDRVKVRSIYGKHFKNVPKTKSPNQVTLLEEDKIMAYYAGGTLYADESRLEPQL
Antenna pigment protein beta chain F 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain D 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain B 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain J 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain 8 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Antenna pigment protein beta chain 0 44 Dinoroseobacter Shibae Dfl 12 = Dsm 16493 DLSFTGLTDEQAQELHSVYMSGLWLFSAVAVVAHLATFIWRPWF
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-02-06
Deposition Author(s): Liu, L.N. , Liu, Z.K. , Wang, P.