PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9LLD

Post-fusion ectodomain of kshv gb in complex with 2c4 fab

PDB DOI: 10.2210/pdb9lld/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Gammaherpesvirus 8

Deposited: 2025-01-17
Deposition Author(s): Fang, X.Y. , Liu, Z. , Sun, C. , Xie, C. , Zeng, M.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

9lld
Literature

Post-fusion ectodomain of kshv gb in complex with 2c4 fab

Fang, X.Y. , Liu, Z. , Sun, C. , Xie, C. , Zeng, M.S.

Primary Citation of Related Structures: 9LLD


Proteins
Molecule Chains Sequence Length Organism Sequence
Core gene UL27 family protein C 661 Homo Sapiens , Human Gammaherpesvirus 8 MTPRSRLATLGTVILLVCFCAGAAHSRGDTFQTSSSPTPPGSSSKAPTKPGEEASGPKSVDFYQFRVCSASITGELFRFNLEQTCPDTKDKYHQEGILLVYKKNIVPHIFKVRRYRKIATSVTVYRGHRESAITNKYELPRPVPLYEISHMDSTYQCFSSMKVNVNGVENTFTDRDDVNTTVFLQPVEGLTDNIQRYFSQPVIYAEPGRVEATYRVRTTVNCEIVDMIARSAEPYNYFVTSLGDTVEVSPFCYNESSCSTTPSNKNGLSVQVVLNHTVVTYSDRGTSPTPQNRIFVETGAYTLSWASESKTTAVCPLALWKTFPRSIQTTHEDSFHFVANEITATFTAPLTPVANFTDTYSCLTSDINTTLNASKAKLASTHVPNGTVQYFHTTGGLYLVWQPMSAINLTHAQGDSGNPTSSPPPSASPMTTSASRGGSGGASTAAAGGGGSTDNLSYTQLQFAYDKLRDGINQVLEELSRAWCREQVRDNLMWYELSKINPTSVMTAIYGRPVSAKFVGDAISVTECINVDQSSVNIHKSLRTNSKDVCYARPLVTFKFLNSSNLFTGQLGARNEIILTNNQVETCKDTCEHYFITRNETLVYKDYAYLRTINTTDISTLNTFIALNLSFIQNIDFKAIELYSSAEKRLASSGSHHHHHH
Core gene UL27 family protein A 661 Homo Sapiens , Human Gammaherpesvirus 8 MTPRSRLATLGTVILLVCFCAGAAHSRGDTFQTSSSPTPPGSSSKAPTKPGEEASGPKSVDFYQFRVCSASITGELFRFNLEQTCPDTKDKYHQEGILLVYKKNIVPHIFKVRRYRKIATSVTVYRGHRESAITNKYELPRPVPLYEISHMDSTYQCFSSMKVNVNGVENTFTDRDDVNTTVFLQPVEGLTDNIQRYFSQPVIYAEPGRVEATYRVRTTVNCEIVDMIARSAEPYNYFVTSLGDTVEVSPFCYNESSCSTTPSNKNGLSVQVVLNHTVVTYSDRGTSPTPQNRIFVETGAYTLSWASESKTTAVCPLALWKTFPRSIQTTHEDSFHFVANEITATFTAPLTPVANFTDTYSCLTSDINTTLNASKAKLASTHVPNGTVQYFHTTGGLYLVWQPMSAINLTHAQGDSGNPTSSPPPSASPMTTSASRGGSGGASTAAAGGGGSTDNLSYTQLQFAYDKLRDGINQVLEELSRAWCREQVRDNLMWYELSKINPTSVMTAIYGRPVSAKFVGDAISVTECINVDQSSVNIHKSLRTNSKDVCYARPLVTFKFLNSSNLFTGQLGARNEIILTNNQVETCKDTCEHYFITRNETLVYKDYAYLRTINTTDISTLNTFIALNLSFIQNIDFKAIELYSSAEKRLASSGSHHHHHH
Core gene UL27 family protein B 661 Homo Sapiens , Human Gammaherpesvirus 8 MTPRSRLATLGTVILLVCFCAGAAHSRGDTFQTSSSPTPPGSSSKAPTKPGEEASGPKSVDFYQFRVCSASITGELFRFNLEQTCPDTKDKYHQEGILLVYKKNIVPHIFKVRRYRKIATSVTVYRGHRESAITNKYELPRPVPLYEISHMDSTYQCFSSMKVNVNGVENTFTDRDDVNTTVFLQPVEGLTDNIQRYFSQPVIYAEPGRVEATYRVRTTVNCEIVDMIARSAEPYNYFVTSLGDTVEVSPFCYNESSCSTTPSNKNGLSVQVVLNHTVVTYSDRGTSPTPQNRIFVETGAYTLSWASESKTTAVCPLALWKTFPRSIQTTHEDSFHFVANEITATFTAPLTPVANFTDTYSCLTSDINTTLNASKAKLASTHVPNGTVQYFHTTGGLYLVWQPMSAINLTHAQGDSGNPTSSPPPSASPMTTSASRGGSGGASTAAAGGGGSTDNLSYTQLQFAYDKLRDGINQVLEELSRAWCREQVRDNLMWYELSKINPTSVMTAIYGRPVSAKFVGDAISVTECINVDQSSVNIHKSLRTNSKDVCYARPLVTFKFLNSSNLFTGQLGARNEIILTNNQVETCKDTCEHYFITRNETLVYKDYAYLRTINTTDISTLNTFIALNLSFIQNIDFKAIELYSSAEKRLASSGSHHHHHH
2C4 Fab H chain H 252 Homo Sapiens , Human Gammaherpesvirus 8 MGWSCIILFLVATATGVHSQVQLVQSGAELKTPGSSVKVSCKASGGTFSSNTVSWLRQAPGQGLEWMGRIIPIVDVTNYAQKFQGRVKITADKSTTTAYMQLSSLRSEDTAVYFCARDDAIDPFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSHHHHHHHH
2C4 Fab H chain D 252 Homo Sapiens , Human Gammaherpesvirus 8 MGWSCIILFLVATATGVHSQVQLVQSGAELKTPGSSVKVSCKASGGTFSSNTVSWLRQAPGQGLEWMGRIIPIVDVTNYAQKFQGRVKITADKSTTTAYMQLSSLRSEDTAVYFCARDDAIDPFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSHHHHHHHH
2C4 Fab H chain E 252 Homo Sapiens , Human Gammaherpesvirus 8 MGWSCIILFLVATATGVHSQVQLVQSGAELKTPGSSVKVSCKASGGTFSSNTVSWLRQAPGQGLEWMGRIIPIVDVTNYAQKFQGRVKITADKSTTTAYMQLSSLRSEDTAVYFCARDDAIDPFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSHHHHHHHH
2C4 Fab L chain L 235 Homo Sapiens , Human Gammaherpesvirus 8 MGWSCIILFLVATATGSWASSELSQPASVSGSPGQSITISCTGTSSDVGAYNFVSWYQQHPGKAPKLMIYDVTKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYASSNTYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
2C4 Fab L chain F 235 Homo Sapiens , Human Gammaherpesvirus 8 MGWSCIILFLVATATGSWASSELSQPASVSGSPGQSITISCTGTSSDVGAYNFVSWYQQHPGKAPKLMIYDVTKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYASSNTYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
2C4 Fab L chain G 235 Homo Sapiens , Human Gammaherpesvirus 8 MGWSCIILFLVATATGSWASSELSQPASVSGSPGQSITISCTGTSSDVGAYNFVSWYQQHPGKAPKLMIYDVTKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYASSNTYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-01-17
Deposition Author(s): Fang, X.Y. , Liu, Z. , Sun, C. , Xie, C. , Zeng, M.S.