PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9LDG

The structure of tkokpta/dna/appr>p complex-b

PDB DOI: 10.2210/pdb9ldg/pdb

Classification: TRANSFERASE/DNA
Organism(s): Thermococcus Kodakarensis , Synthetic Construct

Deposited: 2025-01-06
Deposition Author(s): Cao, C.L. , Gan, J.H. , Yang, J. , Zhang, W.Z.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

Literature

The structure of tkokpta/dna/appr>p complex-b

Cao, C.L. , Gan, J.H. , Yang, J. , Zhang, W.Z.

Primary Citation of Related Structures: 9LDG


Proteins
Molecule Chains Sequence Length Organism Sequence
Probable RNA 2'-phosphotransferase A 180 Thermococcus Kodakarensis , Synthetic Construct MKPERKRVSKLMAYILRHSPEEFGLRPDVEGFVSLNELVNALKTVYPEVTEEFVREIVENDPKGRYEIRGDRIRARYGHSFPVSLDHEEDTESRFLYHGTPRRNLPSILKEGLKPMKRQYVHVSTDKIEALETGRRHGREVVLLVIDAECLRKRGFKIYKAGKNVRIVERVPPDCITLAV
Probable RNA 2'-phosphotransferase B 180 Thermococcus Kodakarensis , Synthetic Construct MKPERKRVSKLMAYILRHSPEEFGLRPDVEGFVSLNELVNALKTVYPEVTEEFVREIVENDPKGRYEIRGDRIRARYGHSFPVSLDHEEDTESRFLYHGTPRRNLPSILKEGLKPMKRQYVHVSTDKIEALETGRRHGREVVLLVIDAECLRKRGFKIYKAGKNVRIVERVPPDCITLAV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') c 10 NA AAAAAAAAAA
DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') d 10 NA AAAAAAAAAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-01-06
Deposition Author(s): Cao, C.L. , Gan, J.H. , Yang, J. , Zhang, W.Z.