9L5S
Cryo-em structure of the thermophile spliceosome (state b*q1)
PDB DOI: 10.2210/pdb9l5s/pdb
Classification: SPLICING/RNA Organism(s): Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719)
Deposited: 2024-12-23 Deposition Author(s): Cheng, J. , Fischer, P. , Hurt, E. , Lau, B. , Li, Y. , Luehrmann, R. , Meng, W. , Wang, M. , Yuan, R.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.9 Å
Cryo-em structure of the thermophile spliceosome (state b*q1)
Cheng, J. , Fischer, P. , Hurt, E. , Lau, B. , Li, Y. , Luehrmann, R. , Meng, W. , Wang, M. , Yuan, R.
Primary Citation of Related Structures: 9L5S
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| U2 snRNA | 2 | 193 | NA | AGCUCUCUUUGCCUUUUGGCUUAGAUCAAGUGUAGUAUCUGUUCUUUUCAGUUUAAUCUCUGAAACUGCUCUACGGAGCAGAAUCGUGAUUAUACUAAUUUUUGGCCUUCGGCGGACUUCCCUCUGGGCUUGCCCAUGGUCGUCUGCCACAGUGUCCCUGGUAUUACACUGCCUCCAGGUGACGCGACCUUCC |
| U5 snRNA | 5 | 116 | NA | UUGGAGUAGGCCAGCUCAGACCGAACUCAUUUCCUGCCUUUUACCGGAUGUGACCGUGAGUUGGCCUGAAAUACUCCCUAACCCAAUCUUUGGAAACUCUCUGGAUAUCCCAGAUU |
| U6 snRNA | 6 | 101 | NA | GCCCUUCGGGGCAUUUGGUCAAUUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAAGGAUGACACGCUACUCAAAGAGACGCUACCAAUUUUU |
| Unknown mRNA | 8 | 25 | NA | AAAXAXXAAAAAXAXAXAXNXXXXX |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Small nuclear ribonucleoprotein E | J | 98 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MTSRGAPAGRRVLLPPINFLFRLLQQRTPVQIWLYEQLAIRITGVIRGFDEFMNLVIDDAVEIKLSPKTNEPESKRPLGQILLKGDNISLIQALSGSA |
| Sm protein F | L | 94 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MNTGFVPVNPRPFLQDLVNQDVIVRLKWGQTEYKGRLVSIDSYMNIQLANTEEFINYKSTGHLGQVLIRCNNVLWVTAAAGKQMTPTEDTKMEE |
| Small nuclear ribonucleoprotein G | K | 82 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MAPAQPELKKYLDKRLFVELNGSRRVIGVLRGYDVFLNIVLDDAVEERPNGEKVKLGMVTIRGNSVVILEPLERIGDDRPGR |
| Pre-mRNA-processing factor 19 | Q | 480 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MLCALSGEIPEEPVVSKKTGVLFEKRLILKYLEEHNNIEPGTTEELDPETDLLPIKTSRVVRPRPPNFTSIPSLLKAFQDEWDALVLETYTTREQLARVREELATALYQHDAAVRVIARLTRERDEAREALARLTVTGAAPAAQNGEAMAVDSESLSEGLVEHVNEVQQQLMKTRKKRPIPQGWATADDVAALQQVAYTDLNVTQASSLDLENECAAVGGLDGKLDIYSVVANKVERTLDIGEPVTATEWTGTKVVIGTAKGWVKVYDAGRESATFQTHAGPVTGLAVHPGGRILASVGVDKSFVFYDLETGERVARGYADAALTTCAFHPDGNLFAAGTQTGHILVFHTTTLEQAESFPLGTPIQALAFSENGFWFAATGKGTSSVTIFDLRKSGAAAAVKELQTGEVLSISWDYTGQYLATGGGTGVTVQMYTKATKSWSEPVRLGMPVVGVKWGGEAKRLVVVSREGVVSVLGKKEE |
| Pre-mRNA-splicing factor PRP46 | T | 496 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MATDVAVNGPDVSKLEALLRDNERTTRSLYASTTPDSGRKRIKLDPGLASEDPDITKSALSLRLHAEYGDVQTLPEAIAKKLSAAGPRKKKPKPGVAEDEAPSKSEEHTRKLIEGIPQAKPSAGAASSNALVLAHGKPSAAGAGAARPQRNEPQQLSLVRRSESLLAQPRPDWHPPWKLMRVISGHLGWVRALAVEPNNQWFASGAGDRTIKIWDLASGQLRLTLTGHISTVRGLAVSPRHPYMFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLKLHPTLDVLVTGGRDGVARVWDMRTRSNVHVLSGHTGTVADLVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALVTHPTEFTFATASTGSIKQWKCPEGAFMQNFEGHNAIINTLAVNDQNVLFSGGDNGSMSFWDWKSGYRFQSLDTTAQPGSLDAELGIMSSTFDMSGARLITGEADKTIKIWKEDTTATPETHPIEWKPSLVRRKY |
| Pre-mRNA-processing protein 45 | R | 578 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MASIAAGLAAALPKPKYSSEHEEPRATQRGPRIVSADQIDETQIVIRRTGPPPYPNRAGWRPRAPEDFGDGGAFPEIPVAQYPWGKNDSSSKSNALVVQVDSEGKVDYTAIARQGHSSDRIIHASFKDLIPLRQRAEAGQIDLSRPSKEEVEATAERTKNALAALVSGALAAQKPKNVQVNTKREATFVKYTPSAQMGNNTKKQERIIKIVERQRDPMEPPKFKHKKIPRGPPSPPPPVMHSPPRKLTAEDQEAWRIPPPVSMWKNPKGFTIPLDKRLAADGRQLQEVQINDKFAQFSEALFMADRHAREEVRQRAMMQQRLAEKERQQKEEHLRQLAQQARAERAAAAASGRRRSTRSRSGSYSGSESGSETDESERERRRARREKLKEEERKLRQSRMGAERRAQVLAREMDRDISEKIALGIAKPTMSGESMYDSRLFNQSSGFGATINEDNPYDKPLFAAQEAISSIYRPRTNAEYEDDEEAGEKEMERIRKGNRFGEALGRGTFKGTEDAQPREGPVQFEKDTETADPFNVDKFLSEVQKGSNSGGGKRGYGLQDEDSRQAKRSRVDDDENDD |
| Peptidyl-prolyl cis-trans isomerase | S | 167 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MATDVALETTMGTIILELYNQHAPRTCENFKTLAARGYYDGTIFHRVIKDFMVQGGDPTGTGRGGRSIYGDTFEDEIHPGLRHTGAGILSMANAGPNTNGSQFFLTLAPTPWLDGKHTIFGRVKKGIRVLQRMGLVPTDADDRPKTEIKIIRAYVVGEGEEDDKQLV |
| Putative bud site selection protein | N | 148 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MPAIRPASKRKPPPDGFSDIEEDLLIFANKMKDAQNTPTDNIPKHQAQWPIFQIAHQRSRYVYELYYQKQAISKQLYDWLLKNGYADAMLIAKWKKQGYEKLCCLRCIQTKETNFNSTCICRVPRAQLKEDQDIQCVNCGCRGCASTD |
| Delta(14)-sterol reductase | M | 592 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MAPKTKKQAVSRTQHYEFFGPPGAAAISFGLPLLVYAFAFACNDITGCPAPSLLHPKSLKLDVLKQEVGWPKNGIWGLASWRVTGWTLAYYLWLALLYRILPGDVVEGTQLRNGGRLKYKLNAFASSMFTLVICAAGTIAQGADFPLWTFIADNYVQILTANVIIAYTLATFVYIRSFSVKPGNPQLRELAVGGVTGNILYDWFIGRELNPRVTLPIIGEIDIKQWMELRPGLLGWTLMNCAFVAKQYRLYGYVTDSIVFVTAVQALYVLDSHYFEPAVLTTIDITTDGFGLMLSFGDIVWVPFIYTQSTRYLAVHPQKLGYLGLVGVTVLLVAGFAIFRLSNSQKNAFRTNPNDPSVKHLKYIETKAGTRLLISGWWGIARHINYLGDWLQAWPYCLPTGLAGYQILTAGSELAEGAVKMLDGRIVVPGEARGWGTIFTYFYVVYFATLLLHRDRRDDEKCSKKYGEDWEKYKEIVRWRIIPALLQKPRSECTEWEIAQIEEWEMANGPLSLLQTAVRSHTQVLISVRSGRKLLARVKAFDRHCNMILENVKEMWTETPVTNGKKGRPVNKDRFISKMFLRGDSVVIVLLS |
| Putative pre-mRNA splicing protein | 0 | 408 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MAELETNPDVAVAVAEDSNEQKQENQLVAVNNEVAAPIEKKVKKIIRKKRRPARPQIDPALVKSERPPQTGTVFNIWYNKWSGGDREDKYLSQTHAKGRCNIARDSGYTRADSRPGSYFCLYFARGICPKGQDCDYLHRLPTIHDIFNPNVDCFGRDKFADYRDDMGGVGSFNRQNRTIYVGRIHVTDDIEEIVARHFAEWGQIERIRVLNNRGVAFITYTNEANAQFAKEAMAHQSLDHNEILNVRWATADPNPLAQKREQRRIEEQAAEAIRRALPAEFVAEIEGKDPEARKRRKLESSYGLEGYEAPDAVHFARGPNAVNPRGREGFELEREQQLMLEAPPETSQPAQIEAPPQAQEKKLAGGILSSRTLAALQGAKVAVATKDSKPEKPSGPLVAYGSDDEEDE |
| PRP17 | W | 547 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MPDFGEYPPNLPVRDALILRESQAQAPTANHAVVPYTGENLARPSYGPANPFRDTSSSSASASGSLKRKNNVLTGHAEEMYISEATFRAKHRAVEAVGGGVMRSNREMKEVNKRLREMREDKGSATIADGEGAYIGPWARYKRREEYEVVDKKGEEEDGDEYEEVEVTDEEEEVIESGTVLKAPEPAIARRKEAEEMGEERTEFLGESEYDYLGRTYMHVPQDLDVSLNKEVGSITNYIPKKLIYTWRHHGGKPITALQLFPRSSHLGLAGSADGVVKIFDVYRGRELLRSYSGHNKAITDLSFCNDGTKFLSGGFDRKIRLWDTETGQCVNRFNIGKTPHVIKFNPSSENGHEFLAGLSDKRIVQYDTRAGNDTVQEYDRHLGPINTIEYIDENRRFMSTSDDRSLKVWEYGIPVEIKTISEPDMFALTKSAQHPNGKYVLYQCSDNSIVAYSCSGDKFRQHRKKAWRGHNTAGSAIGLTCSPDGQFVASGDTSGSVCFWDFKTCKLYSKLTADSAGGIINCVAWSEQETSKVFTAGAKGEIKLWD |
| Sm protein B | P | 211 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSSSQNRQGKMAGYINWRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRKTKRMQAKPNSSTTQTLIQEEKRTLGLTIVRGANIIALSVESPPPADPSARLGKTTGAGIASTLTAGPGVARPAGRGAAAPISLAGPAPGVGGAVPPPPFPGFPAAAPPGFPGRGGPAPPGFPAAPFPPPAGFPGAPGFPPGFPPGGAPPPAGFNPPPRR |
| Pre-mRNA-splicing factor | Y | 1416 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MPPAKRIKSSADSRPNAGASGRPTLEDLEGENQFTNLARQHWLNVPQQAAKIKVKTDVLKRELYLWPGYGEDSSNYHVLLIILIVNAKRRERVSTWDIFADRPADFSDLFRRALSMTLDSSLSWTIRTHVLLFIIHAFQSLDYAIVRKECAPLVSISIWHNLSTEEKREALLDSNPHLRKAWRAATKRFESADDATKARLRFDRAWLYSLVLDFLTLLYSGNAKQEHVLYCERFVEFLTDLQSQLPTRRYVNTLLQDLHVLPALSLSPIYNDEGNGLLRELCNLFTHYTYFAVDDQSGVQLSREQAYDRHCAILAKLQRIAMKHFKEKLTVLALSNYGSIDKRSELEPLLQALTDDELVQLSNLMNIRTSYPDAARIPVDRKFIVEVLLTTFERRKTFQDAAQALSVLPTEETLFDISLKRTDQYDGSRPLALPKLNLQYLSVGDFLWRSFVLYRCESFYAIRQDLEDALIRLKPEVRRGGVTGFAGFSKMALPISKPVILDVMPPQVGDDKPSCVKAEVTIDLRRLTPQIRRDWESLRPDDVVFLLAVDASRQKQSANGGAVLSEAERLGLVHVRAAEIIQVLDDKGKAIRDPQAYFDGHTRSDIRKIQLRLDATSYKADTEANRNVYEDINLIVRRSSRENNFKPVLESIQDLTLSEVPLASWLHEVFLGYGDPAGATFKQLPNRLKKINFRDTFLDWQHLVESFPGKIIEPSDDVSSSFGPPYVLESVEKQVEEHPSKPSKKRRRDVEPALMSKVETLKVSTYKPPNNGPYPVDAPKLNKIRFTPTQIDAIYSGTQPGLTIIVGPPGTGKTDVAVQIISNIYHNFPEQKTLLVAHSNQALNQLFAKIVALDIDERHLLRLGHGEEELETEGSFSKHGRVESFLDNRQRFLYEVSRLAASMGAPGAHGNSAETAGYFNKVYVEPAWAKFNDIIQREDVGPEDIVRAFPFHAYFSDAPQPLFPPEADRETVLEIANGCYRHISKIFEELADVLPFEILRRDKDKANYLLTSEARIIAMTSTHAAMKRGEIASLGFQYDNVIMEEAAQITEIENFIPLALQKPKNGQMALQRVVLCGDHYQNSPVIQGLAFRHYANLEQSLFSRLVRLGVPTINLDQQGRARPSISNLYRWRYPQLGDLPHTQTEPEFLTANAGFRYDYQFVNVPDYRGMGESEPTPHFIQNLGEAEYAVAIFQYMRLLGYPASKISILATYAGQKALIKDVLAHRCAKNPIFGLPRVVTTVDKYQGEQNDYIILSLTRTTRVGYLRDLRRLTVALSRARLGLYILGRRAVFESCYELRDAFSLLLRRPDKLALVTGELWPSKRLLADETDDTKKLEGEVVMEGVEHLGQWVFEMTKTKIAELRKEKGLSEEVPVEMPKEVVSAEADEGYLPLDEEEGDGEEGEGERVKGFEIEDS |
| GPATCH1 | 1 | 698 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSHKRSRAAYEADLTAQQSPYVFFGTPLPPLDPDVRDDGSYVPIWKQEARDERGRKRFHGAFTGGWSAGYFNTVGSKEGWTPSSFVSSRTKRWKDDPNKVEQRPEDFMDEEDLADLEESRKLQTREAFSGLGSTADDAVRASGLMGLFRVEGETMGVKLLKKMGWKEGQGIGPKVRRKARLGLGSDANITEETHLFAPDNVPMISFVRKTDHKGLGYAGETGLTPLSKANGQNESDEEDEDDGGIGSLGRPRFSLTTERKKGPQRPRGSIGVGILNDTGSDDEDPYELGPKISYNRVIGGDKQKKKTATATNPTLKSKPTFVSSKSKALGKVALGVRKCHDGRLPLDGFVFGKEPDPLISEIIAEGKYPPPRIPPGWVSSKKPTSSAKQPAGYVSTAEAAKSSTLDPRARAAILGEKQLPGKSVFDFLSPEARERLVAATGKKDLPPARGEVPAEYALSEDERLKKLLAQVPRLDKETAVAAITRGASGAAPYADDEAKRSRYLSFLEWQAGFKSSPGARTPKMKDDDWLRELHEFYNCARIFKPMTGFMASRFTTSSAAKPGSSSDGGASNNSCSQTPTKPQDPTEEAAKLGMFGPMTRTVTEFYPSRLLCKRFGVNPPEHVRSDEYPANKSRFDASSIGGCSAASTGPTEEGTKPAWMPTGKAVVVVDPSRNEALEAKRAGEEVFKAVFGDSGDEG |
| Putative pre-mRNA splicing protein | Z | 678 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MASADSAAAAAKTEEQKLAEQRAEYQKLLELRSQGVYLPPHKLRALQAAITDPKTKEYQRIAWDALKKSINGLVNKVNTANIKHVVPELFNENLIRGRGLFCQSLLKAQHASLPFTPIYACMAAIVNTKLPQVGELLVKRLIMRFRKAFKRNDKPVCLSSTMFIAHLVNQQVVHETLAGQILVLLLQKPTDDSVEIAVGFMREVGLFLEEMAPRIAHIVFDQFKNILHEADIDRRTQYMIEVLFQIRKDRYKDNPVIKEELDLIEEEDQITHRISLDEDINTEDSLNIFKYDPEWEENENEYKKLKAEILGEVSGDEDEEDEDEEDEESEESEDEEQKAIEIRDQTNADLVNLRRTIYLTIQSSADPEEAAHKLMKLKLPPGQEPELVSMIIESCAQEKVYSKFMGLLGEKFARLNRMWMELYEEAFTKYYNTIHRYETNKLRNIARFFGHLLSYDAIGWHVLSVIQLTEEETTAASRIFIRFLFEDIQENLGTAKLKARLGDEALQPYLEGIFRHDTRRNVTFAINYFTAIKMGYLTDEMHPGRHHGRGLGPEVALRRVPLFVGPDPTAGAGAGAGTGAAGATPAAPAGAEAAPEIIPALFPQEVGADPSLARFLAHHPLVVKQESLTGAVSGSKEAEKVEVEVEVEVKVEDTAEARRAVQQVSVAVKVPIEVCVPP |
| Small nuclear ribonucleoprotein Sm D1 | O | 118 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MKLVRFLMKCANETVTIELKNGAIVHGTIASVTPKMDTALRNVRYTPKGEEPYSVESLTVRGNTIRYYILPDSLPLDTLLIDDAPKPKNKARKEADRGRGRGRGRGGRGGRGGRARGR |
| Small nuclear ribonucleoprotein Sm D3 | U | 114 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MTSSIGIPIKLLNEAQGHIVTLELTTGQTYRGKLIEAEDNMNVQLKDITVTARDGRVSHLEQIYIRGSHVRFFIVPDMLRNAPMFRSRNVRGRGVGLARGRATVSRARASGRGR |
| Putative pre-mRNA splicing protein | V | 223 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSDNVGLPTPRGSGTSGYVQRNLAHLRPREPIKPRDPESYRHKPRKPDPGLLEHDRKREVEVKVFELRDKLEEEGVDEEEIESRCSELRQKLLAEMERNKDALPAQRKTFKAHQVHEAADAKLKESERLRQALKISKDYEEGSHWRRQEERKKPLERGDLPPGVADREKERERGRERGRDGDRNGDRYRQRDDDRYQPEPEPEQKQEQKQKLEQKSSAWAGSV |
| Nineteen complex-related protein 2-domain-containing protein | CY | 510 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MAAFGAKRKPRIIKAFDDDDEDLSLPLSSGGEDKQAGEELPPPARIKFGRTKFTKSSALRKNAMIGNDDTDSPNATSARDDDDDDENSGAPVVVRPSSVNKGSLSKIKKRPAASRLSFGPSAGAEDDDEEAEVVIQPRKMLNQRAVENSALRANSSLPTRFGGEENRPKYSKEYLAELQSATFNTPQNLADLKIHDDDEMQLDEMELEGALIVPSNEVAVPGASTTQTTHIPTEAEIRERKERRARLAHEAKFIPLDDEFNSDNEGAQPSHPILNLPSKQKRRDTRLIREDEDLYEGFDEFVSDGNLALGRKAEKAVLQRHRQEMAELIEAAQAEDNDEAASDDSEAEERAAYEEAQVRAAMDGLRGKYREEHLERGGGADLYEGRGPDDIPRMKPLPKLGDVLQRIREAIQGLEGEVVRKRSRIEGLEKEKAEILVREKEVQEILNQAGQKYQEVVGGLGVHNVPKIVAGQSPLRPFPPGLAREMPTERGLESYGATPIRRYGGEEDDG |
| GCFC2 | CK | 66 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| TFIP11 | CB | 700 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| Putative pre-mRNA splicing protein | CV | 246 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MARNSEKAQSMLFRFREAQAADLGIIDAGRARRPRVITEVDSIPACEKWRGQVLKEISRKVSRIQDPALSDYQIRDLNDEINKLMREKHMWEVQIRNLGGPNYMRGGGKVYDEAGREIPGAGRGYRYFGRARELPGVKELFEAAAKAKREEEEKPLEERADLRRQVNAAYYGYAPGEEDDELLEYERAREEQARKALQKAGPPDAPPGWEPLPGDTGDGRVWELPTLEEVQRELIERRRQRLLDQL |
| PRP8 | A | 2463 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MLRPCALAIWQGFAPLQSRESSSRFSLFKPRPVPGFHQHTTLKGEVAISNCGEIVAPISFGLWRIFANRSRSNAGNTATCLRFRRLLPDGGPPPPPPPPPPPPGPPSDLPPPPPPSSSSLPPPPAIPAPPPPGYRPPSDPHIAKFAQKKKEWLRMQRNRFGEKRKGGFVETQKADMPPEHLRKIVKDIGDVSQKKYTSDKRSYLGALKFMPHAVLKLLENMPMPWEAAREVKVLYHVNGCLTLVNEIPRVIEPVFFAQWGSMWRTMRKEKSDRRLFKRMRFPPFDDEEPPLSWSENIEDVEPLEPIQMELDEDEDAAVYEWFYDHQPLIDTPHVNGPSYKRWNLTLPQMANLYRLSEPLVSDVVDPNYFYLFELKSFLTAKALNVALPGGPRFEPLYKDIDPNDEDFGEFNAMDRIIFRNPIRTETRVAYPYLYNSRPRSVHLSWHSYPQIVYTKTEDPELPAFYFDTSINPISSRAVAPKNLTVSHEDELFGKGNIEEPEEEAFVLPAAVEPFFADEELETEDTRSAIELWWAPYPFDRRSGRMVRAQDVPLIKHWYLEHCPPKQPVKVRVSYQKLLKTYVLNELHRKRPKSMQKQSLLRTLKQTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGNIDAFQLADGIHYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNTGPVGKGPGCGFWAPSWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMADLMDMMPEGIKQSKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKAKADWWISVAHYNRERIRRGATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVSSEEAVAIYTTTVHWLEARKFSPIPFPSVSYKHDTKILILALERLREAYSTKGRLNQSQREELALIEQAYDSPGTTLERIKRFLLTQRAFKEVGIDMNDNYSTINPVYDVEPIEKISDAYLDQYLWYQADQRHLFPNWVKPSDSEVPPLLVYKWCQGINNLDKVWDTSNGECNVIIETQLSKVYEKIELTLLNSLLRLIMDHNLADYITAKNNVTLTYKDMSHVNSYGMIRGLQFSAFVFQYYGLILDLLILGPQRAAEIAGPPQSPNDFLQFQDRDTETRHPIRLYTRYIDKIWVFLRFTAEESRDLIQRFLTEQPDPNFENVIGFKSKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRSVTTIEWDDTFVSVYSKDNPNLLFSMCGFEVRILPKCRNQNDEFPVKDSVWSLVDNSTKERTAHAFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVNLLDTIVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMLSGSHILIPASDKRWCKQTDVGITHFRAGMSHDEETLIPNIARYIIPWEAEFIDSQRVWTEYSQKRLEAQQQNRRLTLEDLEDSWDRGLPRINTLFQKDRSTLSFDKGFRARAEFKIYQLMKSNPFWWTNPRHDGKLWNLNAYRTDVIQALGGVETILEHTLFKATGFPSWEGLFWEKSSGFEASMQFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELEALSIESVQKETIHPRKSYKMNSSCADIQLFASHKWNVTRPSLLFDTKDVIEATTTNKFWIDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSLYPSPTGLMIGIDLAYNLYSAYGQYFPGLKTLIQQAMAKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSELFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVNLVDFPNISIRASELQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNQDKTKLILRPDKTVITQDHHIWPSLTDEDWIKVEMQLRDLILNDYGKKNNVNVASLTTSEVRDIILGMEISAPSLQRQQAAEIEKQQQEQAQLTAVTTKTQNVHGEEIIVTTTSQFEQQTFASKTEWRTRAIATSNLRTRANNMYVAPVDNDVDDITYVMPKNILKKFITIADLRVQVAGFLYGCSPADNDQVKEIRCIVMVPQIGGNRSVQLPQHLPQHEMLKGLEPLGLIHTMAGNELPYMSPADVTTHAKLVDAHPSWKNQNTLTVTVAFTPGSVSLSAWALTPLGYKWGVENKDPNVDNPQGFTTTMGERRQLLLSDKFKGFFLVPDTGKWNYSFMGSSFSGIEKKPYHVKLDTPLPFYSEQHRPIHFTSFNELEDIWVDRADNFA |
| Pre-mRNA-splicing factor SYF2 | B | 326 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MPPAKKRKTEASQEPRPASEQQEQNGAQEEQPTVQDSTPEVESRSDDKKVSQSPTLATDPSDDTSEQPSESSTKNAALTAAQERLARFRALQARAKESSQQNLKEATKESQRLATDPSQLTALSRKHAIAAHKLLKAEIEDAGGDFERKRAWDWTVEEAERWDKRMKKKEAHRDDTAFRDYAREAEKTYKRQIRNMGAPDLEKYMREKLSAIEKAAAAGTLDIIETEDGEMIAVDKDGTFFSTANATDFAQHKPDKAAVDRLVADLRKAEEASLKRRREKLAKSGEEHGDVTYINEKNKQFNAKLARFYNKYTAEIRDSFERGTMV |
| SNU114 | C | 1011 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MWQRATRLRLSESFGPSTTDSNHTFPDLAATMDDDLYDEFGNFIGEEAESEEESDHGANAGVYAYDEYVDEAPEEPAEEQMDIDEEPPSNAVILHEDKQYYPTAAQVFGEGVETLVQEEDAQPLTQPIIAPVEQKKFSIQEADLPPVYFDRGFMTDLMNFPEQIRNIALAGHLHHGKTAFMDMLVLETHAIQERLDKRTGKKRDEQLRYTDVHVIERDRGLSIKAAPMSLVLSSTKGKSHLFNIIDTPGHVDFVDEVAAAFRLVDGVCLVVDVVEGVQVNTEQIIKHAVLEDIPLTLIINKMDRLILELKIPPTDAYFKLKHVIEEVNTVIENTIPGRGESKRLSPEKGNVLFACTSMGWCFTLQSFAKMYSESYGGVNVEEFARRLWGDVYFNPKKRTFTRKPIEEGAKRSFVNFVMEPIYKLYSHTISEGPEDLKRTLSKLGIFLKPSQYKADPKVLMKLVCEQFFGPSTAFVDMVIKHIPSPLEAAEKKLERYYTGPLDTKIAESMKNCDQNGPLVVHVTKLFNTIDAKSFYAFGRVMSGIARPGADVRVLGEGYTLDDEEDMVVSRISDVFIAETRYNIPTDGVPAGNFVLLGGVDNSIVKTATIVDKKFDNGEDAYVFKPLSHFTESVLKVAVEPINPSELPKMLDGIRKINKSYPLITTKVEESGEHIILGTGELYMDCVLHDLRKLYADMEVRVSDPVVRFCETVQDMSATKCYAITPNKKNTITMAAEPLDDGIAQDIESGAVKIKDPPRKVAKFFEEKYGWDKLAARSIWAFGPDEMGPNILQDDTLPTEVDKKRLATVKESIRQGFAWATREGPLCEEPIRNTKFRLIDVSLFPWWWPNYSDRSTCLLFLFLDGLPRLMEPMYSVSMTGPQSSVSMVYNILSRRRGHVLSDGPIAGTPLYRVNGLIPVIDSFGFETDLRINTPGQAMVSLVFDRWSIVPGDPLDREQVTRPLQMATAQATARDFVLKTRRRKGLSEDVTVAKFLEPEFYQSLLESGTLGEP |
| Anaphase-promoting complex subunit 4-like WD40 domain-containing protein | E | 352 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSEKRPASDDPGEGQLVVKRQNVGSSRALTRTGDSAGALIQTTPRTSNLKAPLMELSGHTGEIFTAKFDPTGTLIASGSMDRTIMLWRVYGDCENYGVLNGHKAAILDLQWSRDGDILFSASADMHLASWDLTTGQRIRRYIGHEEIINAMDVTQRGEELLISGSDDGTIGIWDPRTKNAVDYIETDFPITAVAVSEAGNEIYSGGIDNDIKVWDIRKKAVVHTMLGHNDTITTLRVSPDGQQLLSYAMDSTARTWDIRPFAPTDRHIRTFDGAPLGLEKNLIRGSWSKDGKKIAVGAGDGTVVIWGSDTGKLLYKLPGHKGTVNCAEFAPDGAPIILSASSDRTMLLGELI |
| CCDC12 | F | 233 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSSYSSLSAAADERKARLAKLASLKRKQPEDDHPPSQDQQPEQSAAESKQEGDSSQASDPVLQHLSLRNYDPVTRGPKLGFEAPPTENLNTLTLEEKAAALEAEARRKAQEEQEAAAQARGLDITTLQPKKPNWDLKREFKQRMAVLDVRTENAIARMVRERLAEKKKAIVGASAAASGAADGAASGGGNNGKGEEGVLEGAEILEGMRMREKEEEEEARREKEAEEAEFGTA |
| Putative pre-mRNA splicing protein | I | 839 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MPSTLASDRQPDVALVCEDDAPYEQDILRNPGSIRPWLSYIEYKLQHGTLREQAFVMERACVQLPRSYKLWKMFRVNHISKLNPAIFATEYQKVNALFERALILLNKMPRIWEMYLKFLMQQPLVTFTRRTFDRALRALPITQHNRIWALYRPFANSAEGITAVKIWRRYMQVHPEDAEDFIELLIQCGLYTEAVKKYIEILNNPKFQSKNAKGHYELWSEMVDLLVEHAVDIETGHETGIDVERIIRSGIERFSDQRGKLWSGLATYWIRRGNFDRARDVFEEGITTVMTVRDFTMIFDAYVEFEESVIGTLMEAASRRAEKGVVDESADFDLDIRMMRFEHLMDRRPFLLNDVLLRQNPNNVAEWEKRVALWGDNKEEVVKTYTDAIAAINPKKAVGAFHLLWANYAKFYEKAGDLRTARIIMEKAVKVPFKSVNELADMWIEWAEMELRNKNFDEAVRIMAKATQAPKRSTVDYFDESLSPQQRVHKSWKLWSFYVDLVESTSSLEETRKIYERIFELRIATPQTVVNYANLLEEHHYYEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLRDLFEQAITDCPPKFAKVLYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLASTRPIYERAIATLPDNEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPEFWAKWEQFEVQHGNEDTFKEMLRVKRSVQAKYNTDVNFIASQALARSQMLKQQQQQQQQQQQQQLQQQQQNGSSGAGDPEVADAMAQLERQARAPAGFVAASENIKGTIAPSTQSVEVSNPDAIDLDDMDE |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-12-23 Deposition Author(s): Cheng, J. , Fischer, P. , Hurt, E. , Lau, B. , Li, Y. , Luehrmann, R. , Meng, W. , Wang, M. , Yuan, R.