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9L5R
Cryo-em structure of the thermophile spliceosome (state ils)
PDB DOI: 10.2210/pdb9l5r/pdb
Classification: SPLICING/RNA Organism(s): Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719)
Deposited: 2024-12-23 Deposition Author(s): Cheng, J. , Fischer, P. , Hurt, E. , Lau, B. , Li, Y. , Luehrmann, R. , Meng, W. , Wang, M. , Yuan, R.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.8 Å
Cryo-em structure of the thermophile spliceosome (state ils)
Cheng, J. , Fischer, P. , Hurt, E. , Lau, B. , Li, Y. , Luehrmann, R. , Meng, W. , Wang, M. , Yuan, R.
Primary Citation of Related Structures: 9L5R
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| U2 snRNA | 2 | 193 | NA | AGCUCUCUUUGCCUUUUGGCUUAGAUCAAGUGUAGUAUCUGUUCUUUUCAGUUUAAUCUCUGAAACUGCUCUACGGAGCAGAAUCGUGAUUAUACUAAUUUUUGGCCUUCGGCGGACUUCCCUCUGGGCUUGCCCAUGGUCGUCUGCCACAGUGUCCCUGGUAUUACACUGCCUCCAGGUGACGCGACCUUCC |
| U5 snRNA | 5 | 116 | NA | UUGGAGUAGGCCAGCUCAGACCGAACUCAUUUCCUGCCUUUUACCGGAUGUGACCGUGAGUUGGCCUGAAAUACUCCCUAACCCAAUCUUUGGAAACUCUCUGGAUAUCCCAGAUU |
| U6 snRNA | 6 | 101 | NA | GCCCUUCGGGGCAUUUGGUCAAUUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAAGGAUGACACGCUACUCAAAGAGACGCUACCAAUUUUU |
| Unknown mRNA | 7 | 101 | NA | GUAXAXAXNXXXXXNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNXXAXAXXXAXXXX |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| U2 small nuclear ribonucleoprotein B'-like protein | I | 201 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSTRGAPPPNLPAKVAAIPPNQTLYVTNLPSAKIQKEDLRTALYMLFSTYGSVLDVVALKTMKMRGQAHIVYKDIQTATMAMRALDGFEFLGRPMKISYAKGKSHIIAKLDGTFKPPTAAKEVEVTDLQHSIFNAPVPGQPGSVTAPAKSSSLPPKPPGGGDQPMPDVGATETRGVKRPREEELEEESDQDVAMEEESDED |
| Small nuclear ribonucleoprotein E | J | 98 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MTSRGAPAGRRVLLPPINFLFRLLQQRTPVQIWLYEQLAIRITGVIRGFDEFMNLVIDDAVEIKLSPKTNEPESKRPLGQILLKGDNISLIQALSGSA |
| Sm protein F | L | 94 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MNTGFVPVNPRPFLQDLVNQDVIVRLKWGQTEYKGRLVSIDSYMNIQLANTEEFINYKSTGHLGQVLIRCNNVLWVTAAAGKQMTPTEDTKMEE |
| Small nuclear ribonucleoprotein G | K | 82 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MAPAQPELKKYLDKRLFVELNGSRRVIGVLRGYDVFLNIVLDDAVEERPNGEKVKLGMVTIRGNSVVILEPLERIGDDRPGR |
| Pre-mRNA-processing factor 19 | Q | 480 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MLCALSGEIPEEPVVSKKTGVLFEKRLILKYLEEHNNIEPGTTEELDPETDLLPIKTSRVVRPRPPNFTSIPSLLKAFQDEWDALVLETYTTREQLARVREELATALYQHDAAVRVIARLTRERDEAREALARLTVTGAAPAAQNGEAMAVDSESLSEGLVEHVNEVQQQLMKTRKKRPIPQGWATADDVAALQQVAYTDLNVTQASSLDLENECAAVGGLDGKLDIYSVVANKVERTLDIGEPVTATEWTGTKVVIGTAKGWVKVYDAGRESATFQTHAGPVTGLAVHPGGRILASVGVDKSFVFYDLETGERVARGYADAALTTCAFHPDGNLFAAGTQTGHILVFHTTTLEQAESFPLGTPIQALAFSENGFWFAATGKGTSSVTIFDLRKSGAAAAVKELQTGEVLSISWDYTGQYLATGGGTGVTVQMYTKATKSWSEPVRLGMPVVGVKWGGEAKRLVVVSREGVVSVLGKKEE |
| Pre-mRNA-splicing factor PRP46 | T | 496 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MATDVAVNGPDVSKLEALLRDNERTTRSLYASTTPDSGRKRIKLDPGLASEDPDITKSALSLRLHAEYGDVQTLPEAIAKKLSAAGPRKKKPKPGVAEDEAPSKSEEHTRKLIEGIPQAKPSAGAASSNALVLAHGKPSAAGAGAARPQRNEPQQLSLVRRSESLLAQPRPDWHPPWKLMRVISGHLGWVRALAVEPNNQWFASGAGDRTIKIWDLASGQLRLTLTGHISTVRGLAVSPRHPYMFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLKLHPTLDVLVTGGRDGVARVWDMRTRSNVHVLSGHTGTVADLVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALVTHPTEFTFATASTGSIKQWKCPEGAFMQNFEGHNAIINTLAVNDQNVLFSGGDNGSMSFWDWKSGYRFQSLDTTAQPGSLDAELGIMSSTFDMSGARLITGEADKTIKIWKEDTTATPETHPIEWKPSLVRRKY |
| Pre-mRNA-processing protein 45 | R | 578 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MASIAAGLAAALPKPKYSSEHEEPRATQRGPRIVSADQIDETQIVIRRTGPPPYPNRAGWRPRAPEDFGDGGAFPEIPVAQYPWGKNDSSSKSNALVVQVDSEGKVDYTAIARQGHSSDRIIHASFKDLIPLRQRAEAGQIDLSRPSKEEVEATAERTKNALAALVSGALAAQKPKNVQVNTKREATFVKYTPSAQMGNNTKKQERIIKIVERQRDPMEPPKFKHKKIPRGPPSPPPPVMHSPPRKLTAEDQEAWRIPPPVSMWKNPKGFTIPLDKRLAADGRQLQEVQINDKFAQFSEALFMADRHAREEVRQRAMMQQRLAEKERQQKEEHLRQLAQQARAERAAAAASGRRRSTRSRSGSYSGSESGSETDESERERRRARREKLKEEERKLRQSRMGAERRAQVLAREMDRDISEKIALGIAKPTMSGESMYDSRLFNQSSGFGATINEDNPYDKPLFAAQEAISSIYRPRTNAEYEDDEEAGEKEMERIRKGNRFGEALGRGTFKGTEDAQPREGPVQFEKDTETADPFNVDKFLSEVQKGSNSGGGKRGYGLQDEDSRQAKRSRVDDDENDD |
| Peptidyl-prolyl cis-trans isomerase | S | 167 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MATDVALETTMGTIILELYNQHAPRTCENFKTLAARGYYDGTIFHRVIKDFMVQGGDPTGTGRGGRSIYGDTFEDEIHPGLRHTGAGILSMANAGPNTNGSQFFLTLAPTPWLDGKHTIFGRVKKGIRVLQRMGLVPTDADDRPKTEIKIIRAYVVGEGEEDDKQLV |
| Putative bud site selection protein | N | 148 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MPAIRPASKRKPPPDGFSDIEEDLLIFANKMKDAQNTPTDNIPKHQAQWPIFQIAHQRSRYVYELYYQKQAISKQLYDWLLKNGYADAMLIAKWKKQGYEKLCCLRCIQTKETNFNSTCICRVPRAQLKEDQDIQCVNCGCRGCASTD |
| Small nuclear ribonucleoprotein Sm D3 | U | 114 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MTSSIGIPIKLLNEAQGHIVTLELTTGQTYRGKLIEAEDNMNVQLKDITVTARDGRVSHLEQIYIRGSHVRFFIVPDMLRNAPMFRSRNVRGRGVGLARGRATVSRARASGRGR |
| Delta(14)-sterol reductase | M | 592 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MAPKTKKQAVSRTQHYEFFGPPGAAAISFGLPLLVYAFAFACNDITGCPAPSLLHPKSLKLDVLKQEVGWPKNGIWGLASWRVTGWTLAYYLWLALLYRILPGDVVEGTQLRNGGRLKYKLNAFASSMFTLVICAAGTIAQGADFPLWTFIADNYVQILTANVIIAYTLATFVYIRSFSVKPGNPQLRELAVGGVTGNILYDWFIGRELNPRVTLPIIGEIDIKQWMELRPGLLGWTLMNCAFVAKQYRLYGYVTDSIVFVTAVQALYVLDSHYFEPAVLTTIDITTDGFGLMLSFGDIVWVPFIYTQSTRYLAVHPQKLGYLGLVGVTVLLVAGFAIFRLSNSQKNAFRTNPNDPSVKHLKYIETKAGTRLLISGWWGIARHINYLGDWLQAWPYCLPTGLAGYQILTAGSELAEGAVKMLDGRIVVPGEARGWGTIFTYFYVVYFATLLLHRDRRDDEKCSKKYGEDWEKYKEIVRWRIIPALLQKPRSECTEWEIAQIEEWEMANGPLSLLQTAVRSHTQVLISVRSGRKLLARVKAFDRHCNMILENVKEMWTETPVTNGKKGRPVNKDRFISKMFLRGDSVVIVLLS |
| Putative pre-mRNA splicing protein | 0 | 408 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MAELETNPDVAVAVAEDSNEQKQENQLVAVNNEVAAPIEKKVKKIIRKKRRPARPQIDPALVKSERPPQTGTVFNIWYNKWSGGDREDKYLSQTHAKGRCNIARDSGYTRADSRPGSYFCLYFARGICPKGQDCDYLHRLPTIHDIFNPNVDCFGRDKFADYRDDMGGVGSFNRQNRTIYVGRIHVTDDIEEIVARHFAEWGQIERIRVLNNRGVAFITYTNEANAQFAKEAMAHQSLDHNEILNVRWATADPNPLAQKREQRRIEEQAAEAIRRALPAEFVAEIEGKDPEARKRRKLESSYGLEGYEAPDAVHFARGPNAVNPRGREGFELEREQQLMLEAPPETSQPAQIEAPPQAQEKKLAGGILSSRTLAALQGAKVAVATKDSKPEKPSGPLVAYGSDDEEDE |
| PRP17 | W | 547 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MPDFGEYPPNLPVRDALILRESQAQAPTANHAVVPYTGENLARPSYGPANPFRDTSSSSASASGSLKRKNNVLTGHAEEMYISEATFRAKHRAVEAVGGGVMRSNREMKEVNKRLREMREDKGSATIADGEGAYIGPWARYKRREEYEVVDKKGEEEDGDEYEEVEVTDEEEEVIESGTVLKAPEPAIARRKEAEEMGEERTEFLGESEYDYLGRTYMHVPQDLDVSLNKEVGSITNYIPKKLIYTWRHHGGKPITALQLFPRSSHLGLAGSADGVVKIFDVYRGRELLRSYSGHNKAITDLSFCNDGTKFLSGGFDRKIRLWDTETGQCVNRFNIGKTPHVIKFNPSSENGHEFLAGLSDKRIVQYDTRAGNDTVQEYDRHLGPINTIEYIDENRRFMSTSDDRSLKVWEYGIPVEIKTISEPDMFALTKSAQHPNGKYVLYQCSDNSIVAYSCSGDKFRQHRKKAWRGHNTAGSAIGLTCSPDGQFVASGDTSGSVCFWDFKTCKLYSKLTADSAGGIINCVAWSEQETSKVFTAGAKGEIKLWD |
| Sm protein B | P | 211 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSSSQNRQGKMAGYINWRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRKTKRMQAKPNSSTTQTLIQEEKRTLGLTIVRGANIIALSVESPPPADPSARLGKTTGAGIASTLTAGPGVARPAGRGAAAPISLAGPAPGVGGAVPPPPFPGFPAAAPPGFPGRGGPAPPGFPAAPFPPPAGFPGAPGFPPGFPPGGAPPPAGFNPPPRR |
| Pre-mRNA-splicing factor | Y | 1416 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MPPAKRIKSSADSRPNAGASGRPTLEDLEGENQFTNLARQHWLNVPQQAAKIKVKTDVLKRELYLWPGYGEDSSNYHVLLIILIVNAKRRERVSTWDIFADRPADFSDLFRRALSMTLDSSLSWTIRTHVLLFIIHAFQSLDYAIVRKECAPLVSISIWHNLSTEEKREALLDSNPHLRKAWRAATKRFESADDATKARLRFDRAWLYSLVLDFLTLLYSGNAKQEHVLYCERFVEFLTDLQSQLPTRRYVNTLLQDLHVLPALSLSPIYNDEGNGLLRELCNLFTHYTYFAVDDQSGVQLSREQAYDRHCAILAKLQRIAMKHFKEKLTVLALSNYGSIDKRSELEPLLQALTDDELVQLSNLMNIRTSYPDAARIPVDRKFIVEVLLTTFERRKTFQDAAQALSVLPTEETLFDISLKRTDQYDGSRPLALPKLNLQYLSVGDFLWRSFVLYRCESFYAIRQDLEDALIRLKPEVRRGGVTGFAGFSKMALPISKPVILDVMPPQVGDDKPSCVKAEVTIDLRRLTPQIRRDWESLRPDDVVFLLAVDASRQKQSANGGAVLSEAERLGLVHVRAAEIIQVLDDKGKAIRDPQAYFDGHTRSDIRKIQLRLDATSYKADTEANRNVYEDINLIVRRSSRENNFKPVLESIQDLTLSEVPLASWLHEVFLGYGDPAGATFKQLPNRLKKINFRDTFLDWQHLVESFPGKIIEPSDDVSSSFGPPYVLESVEKQVEEHPSKPSKKRRRDVEPALMSKVETLKVSTYKPPNNGPYPVDAPKLNKIRFTPTQIDAIYSGTQPGLTIIVGPPGTGKTDVAVQIISNIYHNFPEQKTLLVAHSNQALNQLFAKIVALDIDERHLLRLGHGEEELETEGSFSKHGRVESFLDNRQRFLYEVSRLAASMGAPGAHGNSAETAGYFNKVYVEPAWAKFNDIIQREDVGPEDIVRAFPFHAYFSDAPQPLFPPEADRETVLEIANGCYRHISKIFEELADVLPFEILRRDKDKANYLLTSEARIIAMTSTHAAMKRGEIASLGFQYDNVIMEEAAQITEIENFIPLALQKPKNGQMALQRVVLCGDHYQNSPVIQGLAFRHYANLEQSLFSRLVRLGVPTINLDQQGRARPSISNLYRWRYPQLGDLPHTQTEPEFLTANAGFRYDYQFVNVPDYRGMGESEPTPHFIQNLGEAEYAVAIFQYMRLLGYPASKISILATYAGQKALIKDVLAHRCAKNPIFGLPRVVTTVDKYQGEQNDYIILSLTRTTRVGYLRDLRRLTVALSRARLGLYILGRRAVFESCYELRDAFSLLLRRPDKLALVTGELWPSKRLLADETDDTKKLEGEVVMEGVEHLGQWVFEMTKTKIAELRKEKGLSEEVPVEMPKEVVSAEADEGYLPLDEEEGDGEEGEGERVKGFEIEDS |
| PRP8 | A | 2463 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MLRPCALAIWQGFAPLQSRESSSRFSLFKPRPVPGFHQHTTLKGEVAISNCGEIVAPISFGLWRIFANRSRSNAGNTATCLRFRRLLPDGGPPPPPPPPPPPPGPPSDLPPPPPPSSSSLPPPPAIPAPPPPGYRPPSDPHIAKFAQKKKEWLRMQRNRFGEKRKGGFVETQKADMPPEHLRKIVKDIGDVSQKKYTSDKRSYLGALKFMPHAVLKLLENMPMPWEAAREVKVLYHVNGCLTLVNEIPRVIEPVFFAQWGSMWRTMRKEKSDRRLFKRMRFPPFDDEEPPLSWSENIEDVEPLEPIQMELDEDEDAAVYEWFYDHQPLIDTPHVNGPSYKRWNLTLPQMANLYRLSEPLVSDVVDPNYFYLFELKSFLTAKALNVALPGGPRFEPLYKDIDPNDEDFGEFNAMDRIIFRNPIRTETRVAYPYLYNSRPRSVHLSWHSYPQIVYTKTEDPELPAFYFDTSINPISSRAVAPKNLTVSHEDELFGKGNIEEPEEEAFVLPAAVEPFFADEELETEDTRSAIELWWAPYPFDRRSGRMVRAQDVPLIKHWYLEHCPPKQPVKVRVSYQKLLKTYVLNELHRKRPKSMQKQSLLRTLKQTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGNIDAFQLADGIHYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNTGPVGKGPGCGFWAPSWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMADLMDMMPEGIKQSKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKAKADWWISVAHYNRERIRRGATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVSSEEAVAIYTTTVHWLEARKFSPIPFPSVSYKHDTKILILALERLREAYSTKGRLNQSQREELALIEQAYDSPGTTLERIKRFLLTQRAFKEVGIDMNDNYSTINPVYDVEPIEKISDAYLDQYLWYQADQRHLFPNWVKPSDSEVPPLLVYKWCQGINNLDKVWDTSNGECNVIIETQLSKVYEKIELTLLNSLLRLIMDHNLADYITAKNNVTLTYKDMSHVNSYGMIRGLQFSAFVFQYYGLILDLLILGPQRAAEIAGPPQSPNDFLQFQDRDTETRHPIRLYTRYIDKIWVFLRFTAEESRDLIQRFLTEQPDPNFENVIGFKSKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRSVTTIEWDDTFVSVYSKDNPNLLFSMCGFEVRILPKCRNQNDEFPVKDSVWSLVDNSTKERTAHAFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVNLLDTIVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMLSGSHILIPASDKRWCKQTDVGITHFRAGMSHDEETLIPNIARYIIPWEAEFIDSQRVWTEYSQKRLEAQQQNRRLTLEDLEDSWDRGLPRINTLFQKDRSTLSFDKGFRARAEFKIYQLMKSNPFWWTNPRHDGKLWNLNAYRTDVIQALGGVETILEHTLFKATGFPSWEGLFWEKSSGFEASMQFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELEALSIESVQKETIHPRKSYKMNSSCADIQLFASHKWNVTRPSLLFDTKDVIEATTTNKFWIDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSLYPSPTGLMIGIDLAYNLYSAYGQYFPGLKTLIQQAMAKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSELFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVNLVDFPNISIRASELQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNQDKTKLILRPDKTVITQDHHIWPSLTDEDWIKVEMQLRDLILNDYGKKNNVNVASLTTSEVRDIILGMEISAPSLQRQQAAEIEKQQQEQAQLTAVTTKTQNVHGEEIIVTTTSQFEQQTFASKTEWRTRAIATSNLRTRANNMYVAPVDNDVDDITYVMPKNILKKFITIADLRVQVAGFLYGCSPADNDQVKEIRCIVMVPQIGGNRSVQLPQHLPQHEMLKGLEPLGLIHTMAGNELPYMSPADVTTHAKLVDAHPSWKNQNTLTVTVAFTPGSVSLSAWALTPLGYKWGVENKDPNVDNPQGFTTTMGERRQLLLSDKFKGFFLVPDTGKWNYSFMGSSFSGIEKKPYHVKLDTPLPFYSEQHRPIHFTSFNELEDIWVDRADNFA |
| Pre-mRNA-splicing factor SYF2 | B | 326 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MPPAKKRKTEASQEPRPASEQQEQNGAQEEQPTVQDSTPEVESRSDDKKVSQSPTLATDPSDDTSEQPSESSTKNAALTAAQERLARFRALQARAKESSQQNLKEATKESQRLATDPSQLTALSRKHAIAAHKLLKAEIEDAGGDFERKRAWDWTVEEAERWDKRMKKKEAHRDDTAFRDYAREAEKTYKRQIRNMGAPDLEKYMREKLSAIEKAAAAGTLDIIETEDGEMIAVDKDGTFFSTANATDFAQHKPDKAAVDRLVADLRKAEEASLKRRREKLAKSGEEHGDVTYINEKNKQFNAKLARFYNKYTAEIRDSFERGTMV |
| SNU114 | C | 1011 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MWQRATRLRLSESFGPSTTDSNHTFPDLAATMDDDLYDEFGNFIGEEAESEEESDHGANAGVYAYDEYVDEAPEEPAEEQMDIDEEPPSNAVILHEDKQYYPTAAQVFGEGVETLVQEEDAQPLTQPIIAPVEQKKFSIQEADLPPVYFDRGFMTDLMNFPEQIRNIALAGHLHHGKTAFMDMLVLETHAIQERLDKRTGKKRDEQLRYTDVHVIERDRGLSIKAAPMSLVLSSTKGKSHLFNIIDTPGHVDFVDEVAAAFRLVDGVCLVVDVVEGVQVNTEQIIKHAVLEDIPLTLIINKMDRLILELKIPPTDAYFKLKHVIEEVNTVIENTIPGRGESKRLSPEKGNVLFACTSMGWCFTLQSFAKMYSESYGGVNVEEFARRLWGDVYFNPKKRTFTRKPIEEGAKRSFVNFVMEPIYKLYSHTISEGPEDLKRTLSKLGIFLKPSQYKADPKVLMKLVCEQFFGPSTAFVDMVIKHIPSPLEAAEKKLERYYTGPLDTKIAESMKNCDQNGPLVVHVTKLFNTIDAKSFYAFGRVMSGIARPGADVRVLGEGYTLDDEEDMVVSRISDVFIAETRYNIPTDGVPAGNFVLLGGVDNSIVKTATIVDKKFDNGEDAYVFKPLSHFTESVLKVAVEPINPSELPKMLDGIRKINKSYPLITTKVEESGEHIILGTGELYMDCVLHDLRKLYADMEVRVSDPVVRFCETVQDMSATKCYAITPNKKNTITMAAEPLDDGIAQDIESGAVKIKDPPRKVAKFFEEKYGWDKLAARSIWAFGPDEMGPNILQDDTLPTEVDKKRLATVKESIRQGFAWATREGPLCEEPIRNTKFRLIDVSLFPWWWPNYSDRSTCLLFLFLDGLPRLMEPMYSVSMTGPQSSVSMVYNILSRRRGHVLSDGPIAGTPLYRVNGLIPVIDSFGFETDLRINTPGQAMVSLVFDRWSIVPGDPLDREQVTRPLQMATAQATARDFVLKTRRRKGLSEDVTVAKFLEPEFYQSLLESGTLGEP |
| SDE2 | D | 325 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MGRSSKINVLISTIEGTGLPPTLCLVLPPDSPVSSLRDELDSRLPTSASPYSTRLLLTTLSSRWVPLDSPLPISHFLPTCDPVADSDSEVDQLQNDFLHLRLAVPLLGGKGGFGSQLRAAGGRMSKRNKRANVNPEEEQGSSRNLDGRRLRTVTEAKALAEYLAIKPEMEKREKEARRKRWQEIIEMTERKQEEIRNGKRGAILDGKWVEEKEVMGERTREAVMEAMKAGAWKDNFISLGEPSSSRTVASSSSADEAMEEDEESENGSSKATTPPSEPDPAAEVKGKGKEKETPMKHPAPAAKKFFGFDDDDEFMSSDDEGGDES |
| Small nuclear ribonucleoprotein Sm D1 | O | 118 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MKLVRFLMKCANETVTIELKNGAIVHGTIASVTPKMDTALRNVRYTPKGEEPYSVESLTVRGNTIRYYILPDSLPLDTLLIDDAPKPKNKARKEADRGRGRGRGRGGRGGRGGRARGR |
| Anaphase-promoting complex subunit 4-like WD40 domain-containing protein | E | 352 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSEKRPASDDPGEGQLVVKRQNVGSSRALTRTGDSAGALIQTTPRTSNLKAPLMELSGHTGEIFTAKFDPTGTLIASGSMDRTIMLWRVYGDCENYGVLNGHKAAILDLQWSRDGDILFSASADMHLASWDLTTGQRIRRYIGHEEIINAMDVTQRGEELLISGSDDGTIGIWDPRTKNAVDYIETDFPITAVAVSEAGNEIYSGGIDNDIKVWDIRKKAVVHTMLGHNDTITTLRVSPDGQQLLSYAMDSTARTWDIRPFAPTDRHIRTFDGAPLGLEKNLIRGSWSKDGKKIAVGAGDGTVVIWGSDTGKLLYKLPGHKGTVNCAEFAPDGAPIILSASSDRTMLLGELI |
| CCDC12 | F | 233 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSSYSSLSAAADERKARLAKLASLKRKQPEDDHPPSQDQQPEQSAAESKQEGDSSQASDPVLQHLSLRNYDPVTRGPKLGFEAPPTENLNTLTLEEKAAALEAEARRKAQEEQEAAAQARGLDITTLQPKKPNWDLKREFKQRMAVLDVRTENAIARMVRERLAEKKKAIVGASAAASGAADGAASGGGNNGKGEEGVLEGAEILEGMRMREKEEEEEARREKEAEEAEFGTA |
| Small nuclear ribonucleoprotein G | G | 82 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MAPAQPELKKYLDKRLFVELNGSRRVIGVLRGYDVFLNIVLDDAVEERPNGEKVKLGMVTIRGNSVVILEPLERIGDDRPGR |
| Unknown protein | H | 22 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | XXXXXXXXXXXXXXXXXXXXXX |
| Nineteen complex-related protein 2-domain-containing protein | CY | 510 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MAAFGAKRKPRIIKAFDDDDEDLSLPLSSGGEDKQAGEELPPPARIKFGRTKFTKSSALRKNAMIGNDDTDSPNATSARDDDDDDENSGAPVVVRPSSVNKGSLSKIKKRPAASRLSFGPSAGAEDDDEEAEVVIQPRKMLNQRAVENSALRANSSLPTRFGGEENRPKYSKEYLAELQSATFNTPQNLADLKIHDDDEMQLDEMELEGALIVPSNEVAVPGASTTQTTHIPTEAEIRERKERRARLAHEAKFIPLDDEFNSDNEGAQPSHPILNLPSKQKRRDTRLIREDEDLYEGFDEFVSDGNLALGRKAEKAVLQRHRQEMAELIEAAQAEDNDEAASDDSEAEERAAYEEAQVRAAMDGLRGKYREEHLERGGGADLYEGRGPDDIPRMKPLPKLGDVLQRIREAIQGLEGEVVRKRSRIEGLEKEKAEILVREKEVQEILNQAGQKYQEVVGGLGVHNVPKIVAGQSPLRPFPPGLAREMPTERGLESYGATPIRRYGGEEDDG |
| G-patch domain-containing protein | CB | 975 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MARLDDLQFDPARLKNSSVDAYSSSDSDGDSDSDDYVIPSRNPHDDEFADYNPRKRRRTGRDPKESAALGIFAEDSDEDEGPARRWKHKPLRNRGVNFVSGGQQKKEEDSSESDEEESNDDERKQQEAVDNEYDDDDPGGVPAALTEDDVDEDEDDEMGGVGLGFKPSSTSATSQPQGGLGWTLPTQQETTTKKPPPFQRFVKSKIDPSNPLGPGFTPTSARAPTLLARNDEPTPPRTALPSAFQPTKDGKTKINPNSFGARMLAKMGYKEGQGLGKDGQGRNVIIEVNLRPQGVGLGAVKEKTKQEREEEKRQARLRGEEVIDSSEEERKKKAAKKKKGLAGKIGSGSGSGASTPRPQKPKYLTMEEIKKVAPGLHIPEAFTPILDMTGPEKKLLTSTSGLMTPTGGTGAAPTAESVEAAEKRKLIKRAQADFMAILEEWQSLQERKAYIDLQLQQERQELEELEASLQGNRSVTTACETALRPPESGELDQKKDLEYRLERIIAGLASATTSLIVGTMLPQVRDELGALAVAAIHPLFNQFRQLWDPLEEPKPSFVDGMKEIRSLLGLDQKPKKKTYRKPSATPYETMMYELWLRTVAASVREWDVREPEPLIAVLEAWDALLPGFVRAQLLRDVVRKLEEAVEKWQPRKHTHNLPHRWIFPWLPYLPASHLDAKAATGLVADVRRKFRTLIDAWDFSRGVIPGLKHWKQVLWPEHGRSSDYWTPLMMNHLLPAMAKYLRQKFRVDPRDQGPYIDILDKVFEWTEVIRPEMVGEVIVAEVFPMWHDALYQWLLLEDANYEEIGQWFEWWQDQVFPDDIKALPSITAEFEKGTAMIERALDLGNRAKDELKPPERGPALRTGREERRRTEKEREREREREKEKERATVGKPPEEITFRQVLEEWCQEHDLQFMPERNKIHAEGPLYRISGPDGKKGVSVYFKGNSVFVLMKDRKPLEFRRDDEAEWGILLDMVY |
| RNA helicase | CC | 764 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MADITKGTKRLSGEAEGSQDSKRVKTNGDKMDAKNPYLAHLEEKPEADFESLLDKLERRNTTAKQAEAVEDSDINPWTGQRHSERYFKILKARRKLPVNKQRQEFLDLYHNNQILVFVGETGSGKTTQIPQYVLYDELPHQTGKLIACTQPRRVAAMSVAQRVADELDVKLGEEVGYSIRFENKTSSKTLLKYMTDGQLLREAMHDRDMSRYSCIILDEAHERTLATDILMALLKQLSERRKDLKIIVMSATLDAQKFQSYFFNAPLLAVPGRTHPVEIFYTPEAERDYVEAAIRTVLQIHACEPEGDILLFLTGEEEIEDACRRISLEVDEMIRESDAGPMSVYPLYGTLPPHQQQRIFEKAPQPFRPGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNPRTRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQTYPEILRSNLSNTVLELKKLGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTPLGNLASEFPLDPALAVMLISSPEFYCSNEILSITSLLSVPQIWVRPANARKRADEMKAQFAHPDGDHLTLLNAYHAYKGAEARGEDMKKWCHEHFLSYRHLSSADNVRAQLKKIMETHGIELVSTPFHDKNYYTNIRRALLAGFFMQVAMRESSNSKVYKTVKDEQLVLIHPSTTVTTPYEWVVYNEFVLTTKQYVRTVTNIRPEWLLEIAPVYYDLSTFQKGEIKNALTRVAEKIRRQQAMKASKA |
| Putative cyclophilin protein | CI | 153 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) | MSDAARWKATVYVGGLAPAVTATVLHEAFLPFGEIAEINLPRNENPNTASTEPHRGFAYVEFEDPEDAKEAIDNMDQSELFGRVIKVSAAKPPKSAGQGLGSKTAVWEQEGWLAEHAVSEEDRLAAERAKNARPNEDPMQGLEDLDVAGPKPE |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-12-23 Deposition Author(s): Cheng, J. , Fischer, P. , Hurt, E. , Lau, B. , Li, Y. , Luehrmann, R. , Meng, W. , Wang, M. , Yuan, R.