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9KQQ
Psi-lhci supercomplex binding with 8 lhcas from c. subellipsoidea
PDB DOI: 10.2210/pdb9kqq/pdb
Classification: PHOTOSYNTHESIS Organism(s): Coccomyxa Subellipsoidea C-169
Deposited: 2024-11-26 Deposition Author(s): Akita, F. , Kato, K. , Shen, J.-R. , Tsai, P.-C.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.06 Å
Psi-lhci supercomplex binding with 8 lhcas from c. subellipsoidea
Akita, F. , Kato, K. , Shen, J.-R. , Tsai, P.-C.
Primary Citation of Related Structures: 9KQQ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Chlorophyll a-b binding protein, chloroplastic | A | 229 | Coccomyxa Subellipsoidea C-169 | MAAAMLTSSFVARGAARPATKLPKSNGSRVVMKAGNWLPGSDTPAYLDGLPGSFGFDPFGLGSTPANLQRFQEAELVHSRWAMAGVAGALGAELLGQGDWYQAPLWAVNGGAPTYLGIPVPFNLSTLLAIEFVAIAGAEAQRNAEPDAEKRKYPGGAFDPLGFSKDSKVLEENKLKELKNGRLAMLAFVGFIAQHAATGKGPLEALKLHLADPWGANFATNGVSIPYLT |
| PSI-K | K | 131 | Coccomyxa Subellipsoidea C-169 | MASSTMSVKSSAVRSFTGMRPSLRPVQAAKIAAPRLSRRSNLTVRADGFIGSTTNLIICSSTAIFLAAGRFGLTPSANRLASPGLKLSPNNSGLQTGDPAGFTATDVLYLGTIGHVVGIGSILGLKAIGAL |
| Photosystem I reaction center subunit XII | M | 31 | Coccomyxa Subellipsoidea C-169 | MPLSDSQIFIALFIALLTGILAVRLGLELYS |
| Photosystem I P700 chlorophyll a apoprotein A2 | B | 734 | Coccomyxa Subellipsoidea C-169 | MATKFPKFSQGLAKDPTTRRIWYGIATAHDFESHDNITEESLYQKIFASHFGQLAIIFLWTSGNLFHVAWQGNFPQWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGAQGPVNIATSGVYQWWYTIGLRTNQDLFQGSVFLTILSGLFLFAGWLHLQPRFQPALAWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPEARGQHVRWDNFLTTLPHPQGLAPFFSGNWAVYAQNPDSSAHLFGTGEGSGTAILTFLGGFHPQTQSLWLTDIAHHHLAIAVVFILAGHMYRTNFGIGHTMQEILDAHTPPGGGLGAGHKGLFDTVNNSLHFQLGLALASVGTITSLVAQHMYSLPPYAFLAQDFTTQASLYTHHQYIAGFILCGAFAHGAIFFVRDYDPEQNKGNVLARILDHKEAVISHLSWVSLFLGFHTLGLYVHNDVMQAFGTPEKQILIEPVFAQWIQAAQGKTLYGFDLLLSQSNSAAFSAGQTLWLPGWLDAINSNSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYFHWKHLGIWQGNVNQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLIYATGFMFLISWRGYWQELIETLAWAHERTPLANLVRWRDKPVALSIVQARLVGLAHFSAGYILTYAAFLIASTSGKFG |
| Chlorophyll a-b binding protein, chloroplastic | 3 | 246 | Coccomyxa Subellipsoidea C-169 | MASTTMMMKSAAHVQETADRSKDTLLFASDQSLSYLTGALPADYGFDPLGLLDPEGKGAGFVSPAWLQYSEVIHARWAMLGAAGCIAPEILATAGVIPQTPDEVIWFKSGVIPPAGVYDKYWLDPYSLFFIEVILVQFAELRRWQDFRNPGSQGKQYFLGLEEVLKGSGDPSYPGGQFFNLFNLGKSDLKELKTKELKNGRLAMLAVFGYGAQAVITAEGPFKNLTDHLSDPTGHNILTNFGHPAL |
| Chlorophyll a-b binding protein, chloroplastic | 4 | 246 | Coccomyxa Subellipsoidea C-169 | MGLERPLHASRAAILRHLELLLTVSAARSARVVVRAERASWLPGSEIPSYLKGELPGDFGFDPLRLGEDPAALKWYQQAELQNGRWAMLAAAGILFVDLLGHLGAGGPAAATPWFKASDFTYFAPTSTLFIVELLLFAWVEVRRYQDMVKPGSTNQDPIFSQYSLPSGNEPGYPGGIFDPLGYSKGNMAELKLKEIKNARLAMLAVLGFFVQAKTTGKTPLDSLSSHLADPWSNNVFGIEHARLIQ |
| Chlorophyll a-b binding protein, chloroplastic | 5 | 274 | Coccomyxa Subellipsoidea C-169 | MAATFTALNAAPAFLTGRKVVSKARAGPAPRSTFQVSAAASQGRRLWAPGVEAPSYLNGELAGDYGWDPLGLGAKPEALKWYRQAELVHARWAMLAVAGILAQEIVKPGVFFYNAGLPENLPGINFGGPEGKVNLGGLLAWEFLLFHWVEVRRWQDIKKKDSVNQDPIFKGNKVPNPELGYPGGIFDPFGFSKGNFKEVQTKEIKNGRLAMVAFVGFIIQAQATGQGPLANLGAHLANPFGNNITKNIGTCAIPSSVDVQGITIPLTCLWPGHQ |
| Chlorophyll a-b binding protein, chloroplastic | 6 | 272 | Coccomyxa Subellipsoidea C-169 | MAALLACNGLSRPILGSPLAARQVSRARPVRQTVVRAERALWLPGGDAPAHLDGSLPGDFGFDPLGLGADPERLAWFAESERVHARWAMLAVAGIAVQEVVRPDVFWYEAALKSPMPFGNSPAAILGLVAFELFAMHFVEVRRAYDFKNPGSQDQDPIFSNNKLPKHEVGYPGGIFAPVIPGDLAELKLKEIKNGRLAMLAFAGFVMQAQVTGKGPLASLGDHLSNPIGTTIFSKAVVIPGQAIVPPCMIPSSVEYHGITIPTPCFLSGLWP |
| Chlorophyll a-b binding protein, chloroplastic | 7 | 259 | Coccomyxa Subellipsoidea C-169 | MANAVAMSSLLGSKSAVAARPAAFSGKARTARVQARFVAVSAADRQVWFPGNAPAPHLDGSLPGDFGFDPLSLGSDPQLLKWFQQAELVHGRTAMTAVAGILFPAVATKAGVVNIPQWYDAGSVWVQNNPNFPFAALLFIQIILTGWVETKRWLDFKNPGSQADGSFLGVTDDFKGVANGYPGGKLFDPFGLSRGSEGQLQKYQENEIKNGRLAMVAFLGFIAQHAATGKGPIDNLADHLANPTAVTFATNGVSLPFVH |
| Chlorophyll a-b binding protein, chloroplastic | 8 | 255 | Coccomyxa Subellipsoidea C-169 | MNTSMLTSSFVSRAAARPAQARPLPSNGSRVCMKAGNWLPGSKTPAYLEDLPGSYGFDPLKLGEDPASLKWYVQSELVHSRFAMAAVAGILIPEVLKAFGAVNLPVWYEAGKYAQESSPIPFNTLIALEIFAFNFVEIKRWQDFKKPGSQGEEGSFVGLEGFFKGTGENGYPGGVFDPLGLSKGPGYEAMKLREIKNGRLAMLAFIGFASQYLATGKGPIENLLDHLSNPLANNFTTNGTSLPAQAHPLLSVLKP |
| PSI subunit V | L | 210 | Coccomyxa Subellipsoidea C-169 | MQVAATSSAIRVPCASSRVSSSRSSLGNIAGLTPVFHARQNRAAVVVRAADKQQVIQPINGDPFIGMLETPVTSSPLVAGFLSNLPAYRIGVSPLLRGVEIGLVHGFLVTGPFIKLGPLRNIPGVAERAGCLSGAGLVVILAVALTIYGASAFQNDAGAIGVKTLSGRELQRDPLQTADGWQKFSAGWLVGGLSGVAWAWILTQTLPYYS |
| Photosystem I iron-sulfur center | C | 81 | Coccomyxa Subellipsoidea C-169 | MSHAVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKASQIASAPRTEDCVGCKRCESACPTDFLSVRVYLGSETTRSMGLAY |
| Photosystem I reaction center subunit II, chloroplastic | D | 192 | Coccomyxa Subellipsoidea C-169 | MASMMLTAAPLCSAPSRQSSFQGTAVRSKPALSRRVLSLSRAVAEEKAAWKPPTLDPSTPSPIFGGSTGGLLRKAQIEEFYVITWDAKKEQVFEMPTGGAAIMRSGPNLLKLARKEQCLALLTQLRNKFKTDGQIYRVFPDGEVQYLHPKDGVYPEKVNAGRTAVGAKDRSIGKNTNPVAVKFTGKLGTYDV |
| Photosystem I reaction centre subunit IV/PsaE | E | 71 | Coccomyxa Subellipsoidea C-169 | MRCDTLLLSERRLWCVQVKVLRPESYWFNEVGKVVSVDQSGIRYPVVVRFPTVNYAGVSTNNYSLEEVQEV |
| Photosystem I reaction center subunit III | F | 245 | Coccomyxa Subellipsoidea C-169 | MAATSCMTARLGAKAPQHELSFKSSVKPLRAAPVARKAVQVARAASCSAQEQAPVQVGKVVAAAALAAALAFGSVDAAKADISGLTPCSESKGFAKRQKNEIKALTKRLKQYEEGSAPSLALKATIERTEKRFANYGNAGLLCGTDGLPHLISDPGLALRFGHAGETLIPTVGFLYIAGWIGTAGRDYLIASKGEAKPREKEYIIDVPLALKISAQGAGWPFRVIRELQKGTLLEKDSNITVSPR |
| Photosystem I reaction center subunit V, chloroplastic | G | 138 | Coccomyxa Subellipsoidea C-169 | MVAAIASSLSLRPLTALPTARPSARRSRVQTPVRALSDTNLVIGGATVASLALGRFVFLGFQRDNAKKQGLPQQNGQSNVEAGDRLAEEASFALKTNDPAGFNLVDVMAWGAIGHALGYFILATTSLNNTPGFDPKPF |
| Photosystem I reaction center subunit VIII | I | 36 | Coccomyxa Subellipsoidea C-169 | MAAAYLPSVLVPLVGLVFPAIAMASLFLYIEKEEIA |
| Photosystem I reaction center subunit IX | J | 41 | Coccomyxa Subellipsoidea C-169 | MKNFTTYLSTAPVVALIWFTFTAGLLIEINRFFPDPLVFSF |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-11-26 Deposition Author(s): Akita, F. , Kato, K. , Shen, J.-R. , Tsai, P.-C.