9KQP
Psi-lhci supercomplex binding with 10 lhcas from c. subellipsoidea
PDB DOI: 10.2210/pdb9kqp/pdb
Classification: PHOTOSYNTHESIS Organism(s): Guillardia Theta Ccmp2712
Deposited: 2024-11-26 Deposition Author(s): Akita, F. , Kato, K. , Shen, J.-R. , Tsai, P.-C.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 1.92 Å
Psi-lhci supercomplex binding with 10 lhcas from c. subellipsoidea
Akita, F. , Kato, K. , Shen, J.-R. , Tsai, P.-C.
Primary Citation of Related Structures: 9KQP
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Chlorophyll a-b binding protein, chloroplastic | A | 229 | Guillardia Theta Ccmp2712 | MAAAMLTSSFVARGAARPATKLPKSNGSRVVMKAGNWLPGSDTPAYLDGLPGSFGFDPFGLGSTPANLQRFQEAELVHSRWAMAGVAGALGAELLGQGDWYQAPLWAVNGGAPTYLGIPVPFNLSTLLAIEFVAIAGAEAQRNAEPDAEKRKYPGGAFDPLGFSKDSKVLEENKLKELKNGRLAMLAFVGFIAQHAATGKGPLEALKLHLADPWGANFATNGVSIPYLT |
| Photosystem I reaction center subunit IX | J | 41 | Guillardia Theta Ccmp2712 | MKNFTTYLSTAPVVALIWFTFTAGLLIEINRFFPDPLVFSF |
| PSI-K | K | 131 | Guillardia Theta Ccmp2712 | MASSTMSVKSSAVRSFTGMRPSLRPVQAAKIAAPRLSRRSNLTVRADGFIGSTTNLIICSSTAIFLAAGRFGLTPSANRLASPGLKLSPNNSGLQTGDPAGFTATDVLYLGTIGHVVGIGSILGLKAIGAL |
| Photosystem I reaction center subunit XII | M | 31 | Guillardia Theta Ccmp2712 | MPLSDSQIFIALFIALLTGILAVRLGLELYS |
| Photosystem I P700 chlorophyll a apoprotein A2 | B | 734 | Guillardia Theta Ccmp2712 | MATKFPKFSQGLAKDPTTRRIWYGIATAHDFESHDNITEESLYQKIFASHFGQLAIIFLWTSGNLFHVAWQGNFPQWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGAQGPVNIATSGVYQWWYTIGLRTNQDLFQGSVFLTILSGLFLFAGWLHLQPRFQPALAWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPEARGQHVRWDNFLTTLPHPQGLAPFFSGNWAVYAQNPDSSAHLFGTGEGSGTAILTFLGGFHPQTQSLWLTDIAHHHLAIAVVFILAGHMYRTNFGIGHTMQEILDAHTPPGGGLGAGHKGLFDTVNNSLHFQLGLALASVGTITSLVAQHMYSLPPYAFLAQDFTTQASLYTHHQYIAGFILCGAFAHGAIFFVRDYDPEQNKGNVLARILDHKEAVISHLSWVSLFLGFHTLGLYVHNDVMQAFGTPEKQILIEPVFAQWIQAAQGKTLYGFDLLLSQSNSAAFSAGQTLWLPGWLDAINSNSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYFHWKHLGIWQGNVNQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLIYATGFMFLISWRGYWQELIETLAWAHERTPLANLVRWRDKPVALSIVQARLVGLAHFSAGYILTYAAFLIASTSGKFG |
| Chlorophyll a-b binding protein, chloroplastic | 3 | 246 | Guillardia Theta Ccmp2712 | MASTTMMMKSAAHVQETADRSKDTLLFASDQSLSYLTGALPADYGFDPLGLLDPEGKGAGFVSPAWLQYSEVIHARWAMLGAAGCIAPEILATAGVIPQTPDEVIWFKSGVIPPAGVYDKYWLDPYSLFFIEVILVQFAELRRWQDFRNPGSQGKQYFLGLEEVLKGSGDPSYPGGQFFNLFNLGKSDLKELKTKELKNGRLAMLAVFGYGAQAVITAEGPFKNLTDHLSDPTGHNILTNFGHPAL |
| Chlorophyll a-b binding protein, chloroplastic | 7 | 259 | Guillardia Theta Ccmp2712 | MANAVAMSSLLGSKSAVAARPAAFSGKARTARVQARFVAVSAADRQVWFPGNAPAPHLDGSLPGDFGFDPLSLGSDPQLLKWFQQAELVHGRTAMTAVAGILFPAVATKAGVVNIPQWYDAGSVWVQNNPNFPFAALLFIQIILTGWVETKRWLDFKNPGSQADGSFLGVTDDFKGVANGYPGGKLFDPFGLSRGSEGQLQKYQENEIKNGRLAMVAFLGFIAQHAATGKGPIDNLADHLANPTAVTFATNGVSLPFVH |
| Chlorophyll a-b binding protein, chloroplastic | 8 | 255 | Guillardia Theta Ccmp2712 | MNTSMLTSSFVSRAAARPAQARPLPSNGSRVCMKAGNWLPGSKTPAYLEDLPGSYGFDPLKLGEDPASLKWYVQSELVHSRFAMAAVAGILIPEVLKAFGAVNLPVWYEAGKYAQESSPIPFNTLIALEIFAFNFVEIKRWQDFKKPGSQGEEGSFVGLEGFFKGTGENGYPGGVFDPLGLSKGPGYEAMKLREIKNGRLAMLAFIGFASQYLATGKGPIENLLDHLSNPLANNFTTNGTSLPAQAHPLLSVLKP |
| Chlorophyll a-b binding protein, chloroplastic | 9 | 230 | Guillardia Theta Ccmp2712 | MAAMTQMSRCVLGARPVAPSFTSLRPRTLVTSAARGLWLPDTEPPAHLKGELAGDRGFDPLGLGSEPERLKWYTEAEKTNGRWAMAGVAGILGQELLGVQPKWFEAGAKDYGFPPLALISLEFLLLGFLELKRYQGFKKTGKSGFLDSFPFDPANLDSEANAEKEIKNGRLAMVAFVGFVGAALVCRQGPIEALQSHLSDPFSNNIIGSIARLPETIGATFPAAAPPALE |
| PSI subunit V | L | 210 | Guillardia Theta Ccmp2712 | MQVAATSSAIRVPCASSRVSSSRSSLGNIAGLTPVFHARQNRAAVVVRAADKQQVIQPINGDPFIGMLETPVTSSPLVAGFLSNLPAYRIGVSPLLRGVEIGLVHGFLVTGPFIKLGPLRNIPGVAERAGCLSGAGLVVILAVALTIYGASAFQNDAGAIGVKTLSGRELQRDPLQTADGWQKFSAGWLVGGLSGVAWAWILTQTLPYYS |
| Photosystem I PsaO | O | 142 | Guillardia Theta Ccmp2712 | MVLAMKASLGLAVRPTTARAGFFGSRAPLAVAPRIRSAAPARNVTICAGQEYPSNWLNKDPLVFVLGFLGWTIPANIGVSAFGGNSLFGSFTQSIGENLARFPQGPPIQDKFWLLLVTYHVGLFLTLLLGQIGVQGRKQGYW |
| Chlorophyll a-b binding protein, chloroplastic/Lhca2 | 2 | 273 | Guillardia Theta Ccmp2712 | MALLSGAPTLVKNASPLSSRINRSSSLVPCSRRNVAVCAEHKPSWLLEKPNRLWELDTTWYPGAEPPSYLDGSLPGDRGFDPFRLAANPSTLPWLVEGELYNGRVAMLAVAGILLVEAAGLGPWWSAPFRVDWPLPYWPGVVVSHAIYAAFELKRFDNFQKYGETGLLGFVPFDPLNMRDDYKRQSEVRNGRLAMLAFIGFCSQAANTGKGPLENLKDHIADPTHNNIFSSGVGTEVTLAVIAITTIPIVLEARKQLSSGEKEGDSFRALPFL |
| Chlorophyll a-b binding protein, chloroplastic | 4 | 246 | Guillardia Theta Ccmp2712 | MGLERPLHASRAAILRHLELLLTVSAARSARVVVRAERASWLPGSEIPSYLKGELPGDFGFDPLRLGEDPAALKWYQQAELQNGRWAMLAAAGILFVDLLGHLGAGGPAAATPWFKASDFTYFAPTSTLFIVELLLFAWVEVRRYQDMVKPGSTNQDPIFSQYSLPSGNEPGYPGGIFDPLGYSKGNMAELKLKEIKNARLAMLAVLGFFVQAKTTGKTPLDSLSSHLADPWSNNVFGIEHARLIQ |
| Chlorophyll a-b binding protein, chloroplastic | 5 | 274 | Guillardia Theta Ccmp2712 | MAATFTALNAAPAFLTGRKVVSKARAGPAPRSTFQVSAAASQGRRLWAPGVEAPSYLNGELAGDYGWDPLGLGAKPEALKWYRQAELVHARWAMLAVAGILAQEIVKPGVFFYNAGLPENLPGINFGGPEGKVNLGGLLAWEFLLFHWVEVRRWQDIKKKDSVNQDPIFKGNKVPNPELGYPGGIFDPFGFSKGNFKEVQTKEIKNGRLAMVAFVGFIIQAQATGQGPLANLGAHLANPFGNNITKNIGTCAIPSSVDVQGITIPLTCLWPGHQ |
| Chlorophyll a-b binding protein, chloroplastic | 6 | 272 | Guillardia Theta Ccmp2712 | MAALLACNGLSRPILGSPLAARQVSRARPVRQTVVRAERALWLPGGDAPAHLDGSLPGDFGFDPLGLGADPERLAWFAESERVHARWAMLAVAGIAVQEVVRPDVFWYEAALKSPMPFGNSPAAILGLVAFELFAMHFVEVRRAYDFKNPGSQDQDPIFSNNKLPKHEVGYPGGIFAPVIPGDLAELKLKEIKNGRLAMLAFAGFVMQAQVTGKGPLASLGDHLSNPIGTTIFSKAVVIPGQAIVPPCMIPSSVEYHGITIPTPCFLSGLWP |
| Photosystem I iron-sulfur center | C | 81 | Guillardia Theta Ccmp2712 | MSHAVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKASQIASAPRTEDCVGCKRCESACPTDFLSVRVYLGSETTRSMGLAY |
| Photosystem I reaction center subunit II, chloroplastic | D | 192 | Guillardia Theta Ccmp2712 | MASMMLTAAPLCSAPSRQSSFQGTAVRSKPALSRRVLSLSRAVAEEKAAWKPPTLDPSTPSPIFGGSTGGLLRKAQIEEFYVITWDAKKEQVFEMPTGGAAIMRSGPNLLKLARKEQCLALLTQLRNKFKTDGQIYRVFPDGEVQYLHPKDGVYPEKVNAGRTAVGAKDRSIGKNTNPVAVKFTGKLGTYDV |
| Photosystem I reaction centre subunit IV/PsaE | E | 71 | Guillardia Theta Ccmp2712 | MRCDTLLLSERRLWCVQVKVLRPESYWFNEVGKVVSVDQSGIRYPVVVRFPTVNYAGVSTNNYSLEEVQEV |
| Photosystem I reaction center subunit III | F | 245 | Guillardia Theta Ccmp2712 | MAATSCMTARLGAKAPQHELSFKSSVKPLRAAPVARKAVQVARAASCSAQEQAPVQVGKVVAAAALAAALAFGSVDAAKADISGLTPCSESKGFAKRQKNEIKALTKRLKQYEEGSAPSLALKATIERTEKRFANYGNAGLLCGTDGLPHLISDPGLALRFGHAGETLIPTVGFLYIAGWIGTAGRDYLIASKGEAKPREKEYIIDVPLALKISAQGAGWPFRVIRELQKGTLLEKDSNITVSPR |
| Photosystem I reaction center subunit V, chloroplastic | G | 138 | Guillardia Theta Ccmp2712 | MVAAIASSLSLRPLTALPTARPSARRSRVQTPVRALSDTNLVIGGATVASLALGRFVFLGFQRDNAKKQGLPQQNGQSNVEAGDRLAEEASFALKTNDPAGFNLVDVMAWGAIGHALGYFILATTSLNNTPGFDPKPF |
| Photosystem I reaction centre subunit VI | H | 133 | Guillardia Theta Ccmp2712 | MTTLRANTFLVGSPVRRPVARAQARRTSNRLATPVQAKYGSDSEYFDLDDLEDTTGSWELYGQEDEKRYPSLQAEFFNRAAAPLTRRESLLAFTFVGGAGSLLLWGAKGSKDVALPIQQGPKKGGEKGPRGKI |
| Photosystem I reaction center subunit VIII | I | 36 | Guillardia Theta Ccmp2712 | MAAAYLPSVLVPLVGLVFPAIAMASLFLYIEKEEIA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-11-26 Deposition Author(s): Akita, F. , Kato, K. , Shen, J.-R. , Tsai, P.-C.