9KQB
Psii-fcpii supercomplex from haptophyte chrysotila roscoffensis
PDB DOI: 10.2210/pdb9kqb/pdb
Classification: PHOTOSYNTHESIS Organism(s): Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990)
Deposited: 2024-11-25 Deposition Author(s): Akita, F. , Kato, K. , La Rocca, R. , Nakajima, Y. , Shen, J.-R. , Tsai, P.-C.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.22 Å
Psii-fcpii supercomplex from haptophyte chrysotila roscoffensis
Akita, F. , Kato, K. , La Rocca, R. , Nakajima, Y. , Shen, J.-R. , Tsai, P.-C.
Primary Citation of Related Structures: 9KQB
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fucoxanthin chlorophyll a/c binding protein II (FCPII-1) | 1 | 166 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MGYENELGVIEPTGFFDPLGLSANIDEETFAQYRTAELKHGRVAQLCVIGYVVPEIYRFPGEIAPGVAFADIPNGVAAINAIPSLGWLQMIFFIGAVDYWGVLGDFDIGKPKLDPDELEKRQVQELQHGRLAMIATLELLRHDSQNLVTPGFDGLDTLITGLPFLY |
| Fucoxanthin chlorophyll a/c binding protein II (FCPII-1) | 7 | 166 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MGYENELGVIEPTGFFDPLGLSANIDEETFAQYRTAELKHGRVAQLCVIGYVVPEIYRFPGEIAPGVAFADIPNGVAAINAIPSLGWLQMIFFIGAVDYWGVLGDFDIGKPKLDPDELEKRQVQELQHGRLAMIATLELLRHDSQNLVTPGFDGLDTLITGLPFLY |
| Fucoxanthin chlorophyll a/c binding protein II (FCPII-1) | 5 | 166 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MGYENELGVIEPTGFFDPLGLSANIDEETFAQYRTAELKHGRVAQLCVIGYVVPEIYRFPGEIAPGVAFADIPNGVAAINAIPSLGWLQMIFFIGAVDYWGVLGDFDIGKPKLDPDELEKRQVQELQHGRLAMIATLELLRHDSQNLVTPGFDGLDTLITGLPFLY |
| Fucoxanthin chlorophyll a/c binding protein II (FCPII-4) | G | 167 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MSYESELGVIPPTGFFDPLGLSKNIDEETFAQYRTAELKHGRVAQLCVIGYIVPEIYRFPGEIAPGVAFADIPNGVAAINAIPALGWFQMVFLIGAVDYWGFLGDFEAGKPDLAPEELEKRKLQELQHGRLAMLAVLELLRHDSQNLVSPGFDGLDKLITGLPFLYN |
| Photosystem II reaction center protein L | L | 38 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MSAPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN |
| Photosystem II reaction center protein M (psbM) | M | 130 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | LCIGRSAAAAMKLTLAFACLAAVEAFVQQPALRPMQSKMAVSKLASSPSMSLETSSIAQLSETLAGVVAVDGGTIGLEVSFGAFLAVILGLFIPVVFLVTLYIQSEAQGTATNFRLPDKAPGVPGDRYDA |
| Photosystem II reaction center protein Psb36 | N | 36 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MAVASNAGDFGGYTIPIIGLGLIGATIALLAGPVDE |
| Photosystem II reaction center protein T | T | 32 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MEALVYTFLLIGTLIVIFFAIFFRDPPRIVKK |
| Photosystem II reaction center protein W (psbW) | W | 53 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | GTGKALGINDDSLGFVLIGVTAVIGLAWAQWQSYQDDGDDFFDTYDSRRAAAA |
| Photosystem II reaction center protein X (psbX) | X | 36 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MTPSLSAFLSSVILAVVIIVIPIGAALVFVSTSDKI |
| Fucoxanthin chlorophyll a/c binding protein II (FCPII-2) | 2 | 225 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MKAPPPKAKGRGWLQKARIADEIDVTGSQYVNVAGLTPQYDEIGVLPPLGRWDPLNIKGQGEARYRRFVEMEIKHGRMAMAAVLGVLTTYSGIRFPGYLSKTLDLKFEDVPGTMIGSWATVPVTGWIQIVLFVVLLEASWWKQDPAKAPGDVVPEGVWWARYPDGYSIFLGDGSVKTVAEDELFLGKTWKLNAERNNGRAAMMGITGMYVHELLTGNPVYPLGEL |
| Fucoxanthin chlorophyll a/c binding protein II (FCPII-2) | 8 | 225 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MKAPPPKAKGRGWLQKARIADEIDVTGSQYVNVAGLTPQYDEIGVLPPLGRWDPLNIKGQGEARYRRFVEMEIKHGRMAMAAVLGVLTTYSGIRFPGYLSKTLDLKFEDVPGTMIGSWATVPVTGWIQIVLFVVLLEASWWKQDPAKAPGDVVPEGVWWARYPDGYSIFLGDGSVKTVAEDELFLGKTWKLNAERNNGRAAMMGITGMYVHELLTGNPVYPLGEL |
| Photosystem II D2 protein | D | 351 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MTIAIGQKQDRGVFDLIDDWLKRDRFVFVGWSGLLLFPCAFLAVGGWLTGITFVTSWYTHGLASSFLEGCNFLTAAVSTPANSMGHSLLLLWGPEAQGDITRWFQIGGLWTFVALHGSFGVIGFCLRQFEIARLVGIRPYNAIAFSGPIAVFVTVFLVYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVAGMWTSSLGIVGLALNLRSYDFVSQELRAAEDPEFETFYTKNNLLNEGIRSWMAAQDQPHENFIFPEEVLPRGNAL |
| Photosystem II CP43 reaction center protein | C | 445 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | ESTGFAWWSGNARLINVSGKLLGAHVAHAGLMVFWCGAMTLFEVAHYIPEKPLYEQGCILIPHLTTLGWGVGPGGEVTDVYPFFVVGVLHLISSAVLGFGGVYHSLIGPDTLEESFPFFGYDWRDKNKMTTILGIHLILLGIGSFLLVAKACFVGGLYDTWAPGGGDVRIVTAPTLNPLIIFGYVLKSPFGGDGWIISVNNLEDLVGGHIWLGFLCVVGGIWHILTKPFAWARRTFVWSGEAYLSYSLAALSVMGLTASVFVWYNNTAYPSEFFGPTGPEASQSQAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPSGEIIFGGETMRFWDMRAPWVEPLRGPNGLDLNKIRNDIQPWQERRAAEYMTHAPLGALNSVGGVATEINSVNYVSPRSWLTTSHFFLGFFLWVGHLWHAGRARAAAAGFEKGINRENEPVLSMRPLD |
| Light harvesting protein | 9 | 216 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MTPETICLLLADVVKMISVVLGSLAFNGLVTPAPTRAAVSMSAISPGDIGTTRPLGVFDPLKLMEKNPGKYRRFQEMEIKHGRIAMLATLHVFITGAGYKWPGYCSYLSFPPLKFEDIPAGTLASWAALPQAGWAQIVAVVAILDNSLFAQDPNREPGDVAGDLPWVRYDDPKVKEYKLNIERNNGRAAMMGIIGMMTHEYLTGNPLYPLSYEPVV |
| Light harvesting protein | 3 | 216 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MTPETICLLLADVVKMISVVLGSLAFNGLVTPAPTRAAVSMSAISPGDIGTTRPLGVFDPLKLMEKNPGKYRRFQEMEIKHGRIAMLATLHVFITGAGYKWPGYCSYLSFPPLKFEDIPAGTLASWAALPQAGWAQIVAVVAILDNSLFAQDPNREPGDVAGDLPWVRYDDPKVKEYKLNIERNNGRAAMMGIIGMMTHEYLTGNPLYPLSYEPVV |
| Fucoxanthin chlorophyll a/c binding protein II (FCPII-5) | 6 | 167 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MGYETELGVIPPTGFFDPLGLSKNIDEETFAQYRTAELKHGRVAQLCVIGYVVPEFYRFPGIIAPGVPFADIPNGVAAINAIPALGWFQMVFLIGAVDYWGVLGDFDAGKPDLAPEELEKRKLQELQHGRLAMLAVLELLRHDSQNLVKPGFDGLDNLITGFPFLYN |
| Fucoxanthin chlorophyll a/c binding protein II (FCPII-5) | J | 167 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MGYETELGVIPPTGFFDPLGLSKNIDEETFAQYRTAELKHGRVAQLCVIGYVVPEFYRFPGIIAPGVPFADIPNGVAAINAIPALGWFQMVFLIGAVDYWGVLGDFDAGKPDLAPEELEKRKLQELQHGRLAMLAVLELLRHDSQNLVKPGFDGLDNLITGFPFLYN |
| Fucoxanthin chlorophyll a/c binding protein II (FCPII-4) | 4 | 167 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MSYESELGVIPPTGFFDPLGLSKNIDEETFAQYRTAELKHGRVAQLCVIGYIVPEIYRFPGEIAPGVAFADIPNGVAAINAIPALGWFQMVFLIGAVDYWGFLGDFEAGKPDLAPEELEKRKLQELQHGRLAMLAVLELLRHDSQNLVSPGFDGLDKLITGLPFLYN |
| Photosystem II protein D1 | A | 360 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MTTTLERRESASFWEQFCAWITSTENRLYIGWFGCLMFPTLLTATSAYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGVHFYPIWEAASIDEWLYNGGPYQLVVFHFFIGVCAYIGREWELSYRLGMRPWICVAFSAPVAAAAAVFVIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETSENESLNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGAWPVVGIWFTAMGVATMAFNLNGFNFNQSVVDSQGRVINTWADILNRSNLGMEVMHERNAHNFPLDLAAGESLPVALVAPAVAA |
| Photosystem II CP47 reaction center protein | B | 509 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSITGESVSNPGIWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLASLLCFGFGAFHVTGAFGPGIWVSDAYGVTGRVQAVAPAWGPEGFNPFNPGGIASHHIAAGILGILAGVFHLTIRPPQRLYRALRMGNIETVLSSSISAVFFAAFITSGTMWYGAATTPIELFGPTRYQWDSGYFQQEIERRVEASISEGLSLSQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFPVILVDKDGIVRADIPFRRAESKYSIEQVGVSCNFYGGKLNGQVFTDAPTVKKYARKSQLGEVFEFDRTTLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGGRTLFRDVFAGIGAEVLEQVEFGAFQKLGDKSTKKQGIV |
| Cytochrome b559 subunit alpha | E | 82 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | GGSTGERPFSDIITSIRYWIIHSITIPSLFVAGFLFVSTGLAYDAFGTPRPNEYFTQDRQQIPLVNDRFSAKQELEDLTKGL |
| Cytochrome b559 subunit beta | F | 42 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MINTNQPVAYPIFTFRWLTIHALAVPTVFFLGAITSMQFIQR |
| Photosystem II reaction center protein H (psbH) | H | 65 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MALRTRLGEILRPLNAEYGKVAPGWGTTSVMGVFMALFLVFLVIILQIYNSSIILENVDVDWVTV |
| Photosystem II reaction center protein I (psbI) | I | 38 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | MFTLKILVYTVVIFFISLFTFGFLSSDPSRNPNRKDLE |
| Photosystem II reaction center protein K (psbK) | K | 40 | Eubacterium Rectale (Strain Atcc 33656 / Vpi 0990) | LLSALPEPYTAFRPIVDVMPAIPVLFLLLAFVWQASVGFR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-11-25 Deposition Author(s): Akita, F. , Kato, K. , La Rocca, R. , Nakajima, Y. , Shen, J.-R. , Tsai, P.-C.